KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:18:53 2014 Check: 00 .. Name: ENSTTRP00000002965/1-683 Len: 685 Check: 7252 Weight: 1.00 Name: ENSP00000385510/1-684 Len: 685 Check: 8990 Weight: 1.00 Name: ENSBTAP00000022762/1-681 Len: 685 Check: 3289 Weight: 1.00 Name: BACU002750/1-662 Len: 685 Check: 6589 Weight: 1.00 Name: bmy_15559T0/1-400 Len: 685 Check: 386 Weight: 1.00 // 1 50 ENSTTRP00000002965/1-683 MEENLISMRE DHSFHVRYRM EASCLELALE GERLCKSGDC RAGVSFFEAA ENSP00000385510/1-684 MEENLISMRE DHSFHVRYRM EASCLELALE GERLCKSGDC RAGVSFFEAA ENSBTAP00000022762/1-681 MEENLINMRE DHSFHVRYRM EASCLELALE GERLCKSGDC RAGVSFFEAA BACU002750/1-662 ---------- ---------M EASCLELALE GERLCKSGDC RAGVSFFEAA bmy_15559T0/1-400 MEENLISMRE DHSFHVRYRM EASCLELALE GERLCKSGDC RAGVSFFEAA 51 100 ENSTTRP00000002965/1-683 VQVGTEDLKT LSAIYSQLGN AYFYLHDYAK ALEYHHHDLT LARTIGDQLG ENSP00000385510/1-684 VQVGTEDLKT LSAIYSQLGN AYFYLHDYAK ALEYHHHDLT LARTIGDQLG ENSBTAP00000022762/1-681 VQVGTEDLKT LSAIYSQLGN AYFYLHDYAK ALEYHHHDLT LARTIGDQLG BACU002750/1-662 VQVGTEDLKT LSAIYSQLGN AYFYLHDYAK ALEYHHHDLT LARTIGDQLG bmy_15559T0/1-400 VQVGTEDLKT LSAIYSQLGN AYFYLHDYAK ALEYHHHDLT LARTIGDQLG 101 150 ENSTTRP00000002965/1-683 EAKASGNLGN TLKVLGNFDE AVVCCQRHLD ISRELNDKXX XXXXXXXXXX ENSP00000385510/1-684 EAKASGNLGN TLKVLGNFDE AIVCCQRHLD ISRELNDKVG EARALYNLGN ENSBTAP00000022762/1-681 EAKASGNLGN TLKVLGNFDE AIVCCQRHLD ISRELNDKVG EARALYNLGN BACU002750/1-662 EAKASGNLGN TLKVLGNFDE AIVCCQRHLD ISRELNDKVG EARALYNLGN bmy_15559T0/1-400 EAKASGNLGN TLKVLGNFDE AIVCCQRHLD ISRELNDKVG EARALYNLGN 151 200 ENSTTRP00000002965/1-683 XXXXXXXXXX XXXXXXXXEF PEEVRNALQA AVDYYEENLS LVTALGDRAA ENSP00000385510/1-684 VYHAKGKSFG CPGPQDVGEF PEEVRDALQA AVDFYEENLS LVTALGDRAA ENSBTAP00000022762/1-681 VYHAKGKSFG CPGPQEVGEF PEEVRNALQA AVDYYEENLS LVTALGDRAA BACU002750/1-662 VYHAKGKSFG CPGPQDVGEF PEEVRNALQA AVDYYEENLS LVTALGDRAA bmy_15559T0/1-400 VYHAKGKSFG CPGPQDVGEF PEEVRNALQA AVDYYEENLS LVTALGDRAA 201 250 ENSTTRP00000002965/1-683 QGRAFGNLGN THYLLGNFRD AVIAHEQRLL IAKEFGDKAA ERRAYSNLGN ENSP00000385510/1-684 QGRAFGNLGN THYLLGNFRD AVIAHEQRLL IAKEFGDKAA ERRAYSNLGN ENSBTAP00000022762/1-681 QGRAFGNLGN THYLLGNFRD AVIAHEQRLL IAKEFGDKAA ERRAYSNLGN BACU002750/1-662 QGRAFGNLGN THYLLGNFRD AVIAHEQRLL IAKEFGDKAA ERRAYSNLGN bmy_15559T0/1-400 QGRAFGNLGN THYLLGNFRD AVIAHEQRLL IAKEFGDKAA ERRAYSNLGN 251 300 ENSTTRP00000002965/1-683 AYIFLGEFET ASEYYRKTLL LARQLKDRAV EAQSCYSLGN TYTLLQDYEK ENSP00000385510/1-684 AYIFLGEFET ASEYYKKTLL LARQLKDRAV EAQSCYSLGN TYTLLQDYEK ENSBTAP00000022762/1-681 AYIFLGEFET ASEYYKKTLL LARQLKDRAI EAQSCYSLGN TYTLLQDYEK BACU002750/1-662 AYIFLGEFET ASEYYRKTLL LARQLKDRAV EAQSCYSLGN TYTLLQDYEK bmy_15559T0/1-400 AYIFLGEFET ASEYYRKTLL LARQLKDRAV EAQSCYSLGN TYTLLQDYEK 301 350 ENSTTRP00000002965/1-683 AIDYHLKHLA IAQELNDRIG EGRACWSLGN AYTALGNHDQ AMHFAEKHLE ENSP00000385510/1-684 AIDYHLKHLA IAQELNDRIG EGRACWSLGN AYTALGNHDQ AMHFAEKHLE ENSBTAP00000022762/1-681 AIDYHLKHLT IAQELNDRIG EGRACWSLGN AYTALGNHDQ AMHFAEKHLE BACU002750/1-662 AIDYHLKHLA IAQELNDRIG EGRACWSLGN AYTALGNHDQ AMHFAEKHLE bmy_15559T0/1-400 AIDYHLKHLA IAQELNDRIG EGRACWSLGN AYTALGNHDQ AMHFAEKHLE 351 400 ENSTTRP00000002965/1-683 ISREVGDRSG ELTAQLNLSD LQMVLGLSYS TNNSMMSENI EVDNSLHGAR ENSP00000385510/1-684 ISREVGDKSG ELTARLNLSD LQMVLGLSYS TNNSIMSENT EIDSSLNGVR ENSBTAP00000022762/1-681 ISREVGDRSG ELTARLNLSD LQMVLGLSYS TNNSMISENI EIDNSLHGAR BACU002750/1-662 ISREVGDRSG ELTAQLNLSD LQMVLGLSYS TNNSMMSENI EVDNSLHGAR bmy_15559T0/1-400 ISREVGDRSG ELTAQLNLSD LQMVLGLSYS TNNSMMSENI EVDNSLHG-- 401 450 ENSTTRP00000002965/1-683 PKFGRRHSME NMELMKLTPE KVQNWNSEIL AKQKPLIAKP SAKLLFVNRL ENSP00000385510/1-684 PKLGRRHSME NMELMKLTPE KVQNWNSEIL AKQKPLIAKP SAKLLFVNRL ENSBTAP00000022762/1-681 PKFGRRHSME NMELMKLTPE KVQNWNSEIL AKQKPLIAKP SAKLLFVNRL BACU002750/1-662 PKFGRRHSME NMELMKLTPE KVQNWNSEIL AKQKPLIAKP SAKLLFVNRL bmy_15559T0/1-400 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000002965/1-683 KGKKYKSNSS TKVLQDASNS IDHRISNSQR KISADTIGDE GFFDLLSRFQ ENSP00000385510/1-684 KGKKYKTNSS TKVLQDASNS IDHRIPNSQR KISADTIGDE GFFDLLSRFQ ENSBTAP00000022762/1-681 KGKKYKTNSS TKVLQDTSNS IDHRIPNSQR KISADSIGDE GFFDLLSRFQ BACU002750/1-662 KGKKYKTNSS TKVLQDASNS IDHRISDSQR KISADTIGDE GFFDLLSRFQ bmy_15559T0/1-400 ---KY----- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000002965/1-683 SNRMDDQRCC LKEQNSGSAS TAASATPPRM MLQTPSVSMV SPNTDEFLDL ENSP00000385510/1-684 SNRMDDQRCC LQEKNCHTAS TTTSSTPPKM MLKTSSVPVV SPNTDEFLDL ENSBTAP00000022762/1-681 SNRMDDQRCC LQEKNSTSAA AAASSTPLKR MLKTPPVSVL SPNTDEFLDL BACU002750/1-662 SNRMDDQRCC LKEQNSGSAS TAASATPPRM MLETPSVSMV SPNTDEFLDL bmy_15559T0/1-400 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000002965/1-683 LASSQSRRLD DQRASFSNLP GLRLTQNNSQ SVLGHLMTND NKEADEDFFD ENSP00000385510/1-684 LASSQSRRLD DQRASFSNLP GLRLTQ-NSQ SVLSHLMTND NKEADEDFFD ENSBTAP00000022762/1-681 LASSQSRRLD DQRASFSNLP GLRLTQNNSQ SVLGHLMTND NKEPEEDFFD BACU002750/1-662 LASSQSRRLD DQRASFSNLP GLRLTQNNNQ SVLGHLMTND NKEADEDFFD bmy_15559T0/1-400 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000002965/1-683 ILVKCQGSRL DDQRCAPPPA ATKGPTVPDE DFFSLILRSQ AKRMDEQRVL ENSP00000385510/1-684 ILVKCQGSRL DDQRCAPPPA TTKGPTVPDE DFFSLILRSQ GKRMDEQRVL ENSBTAP00000022762/1-681 ILVKCQGSRL DDQRCAPPPA ATKGPTVPDE DFLSLILRSQ AKRMDEQRAL BACU002750/1-662 ILVKCQGSRL DDQRCAPPPA ATKGPTVPDE DFFSLILRSQ AKRMDEQRVL bmy_15559T0/1-400 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000002965/1-683 LQRDQNRDTE FGPKDLLQNN ALLELENSKK ANH-- ENSP00000385510/1-684 LQRDQNRDTD FGLKDFLQNN ALLEFKNSGK KSADH ENSBTAP00000022762/1-681 LQRDQNRDTE FGLKDLLQSN ALLELENSGK K---- BACU002750/1-662 LQRDQNRDTE FGPKDLLRSN ALLELENSGK K---- bmy_15559T0/1-400 ---------- ---------- ---------- -----