KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:18:55 2014 Check: 00 .. Name: ENSP00000301190/1-452 Len: 467 Check: 7763 Weight: 1.00 Name: ENSBTAP00000022764/1-382 Len: 467 Check: 3944 Weight: 1.00 Name: bmy_19451T0/1-399 Len: 467 Check: 5156 Weight: 1.00 Name: ENSTTRP00000004643/1-445 Len: 467 Check: 590 Weight: 1.00 // 1 50 ENSP00000301190/1-452 MKVQPSVTCV ASWGGIVHLE AFGDPVIVLR GAWAVPRVDC LIDTLRTPNA ENSBTAP00000022764/1-382 ---------- ---------- ---------- ---------- ---------- bmy_19451T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004643/1-445 -LVAPSVTCV ASW-GCVHLE TLRDPVCVLP GVWAGPRNDC LLGTLQTPDA 51 100 ENSP00000301190/1-452 SCMRKGTHLL VPCLEEEELA LHRRRLDMSE ALPCPGKETP TPGCRLGALY ENSBTAP00000022764/1-382 ---------- ---------- -------ASE APSCLDSEAS TPSCTLGALY bmy_19451T0/1-399 ---------- ---MEEEELT LQKGRLDISE ALSRPDNETF TPSCTLGALY ENSTTRP00000004643/1-445 NCVRRGTHLL APRMEEEELT LQKGGLDVAE TLSCPDHETF TPSCVLGALY 101 150 ENSP00000301190/1-452 WACVHNDPTQ LQAILDGGVS PEEATQVDSN GRTGLMVACY HGFQSVVALL ENSBTAP00000022764/1-382 WACVRNDPAQ LQAMLDDGVS PEEATQVDGN GRTGLMVACY HGFQSVVALL bmy_19451T0/1-399 WACSRNDTAQ LQAMLDDGVS PEEATQVDSN GRTGLMVACY HGFQSVVALL ENSTTRP00000004643/1-445 WACFHNDTAQ LQAMLDDGVS PEEATQVDSN GRTGLMVACY HGFQSVVALL 151 200 ENSP00000301190/1-452 SHCPFLDVNQ QDKGGDTALM LAAQAGHVPL VSLLLNYYVG LDLERRDQRG ENSBTAP00000022764/1-382 SRCPFLDVNQ QDKEGDTALM LAAQAGHVSL VSHLINYYAG LDLERRDQRG bmy_19451T0/1-399 SRCPFLDVNQ QDKEGDTALM LAAQAGHVPL VSLLINYYAG LDLERRDQRG ENSTTRP00000004643/1-445 SRCPFLDVNQ QDKEGDTALM LAAQAGHVPL VSLLINYYAG LDLERRDQRG 201 250 ENSP00000301190/1-452 LTALMKAAMR NRC------- ---ADLTAVD PVRGKTALEW AVLTDSFDTV ENSBTAP00000022764/1-382 LTALMKAAMR DRSECVAALL MAGADLTAVD PVRGKTALEW AFLTDSFDTV bmy_19451T0/1-399 PTALMKAAMR DRSECVAALL MAGADLTAVD PVRGKTALEW AFLTDSFDTV ENSTTRP00000004643/1-445 LTALMKAAMR DRC------- ---ADLTAVD PVRGKTALEW AFLTDSFDTV 251 300 ENSP00000301190/1-452 WRIRQLLRRP QVEQLSQHYK PEWPALSGLV AQAQAQAQVA PSLLERLQAT ENSBTAP00000022764/1-382 QRIRQLLRRP QVEQLSQHYQ PEWPALPGLV AQAQA----A PSLLERLQAT bmy_19451T0/1-399 QRIKQLLRRP QVEQLSHHYQ PEWPALPGLV AQAQAQA--A PSFLERLQAT ENSTTRP00000004643/1-445 QRIQQLLRRP QVEQLSHHYQ PEWPALPGLV AQAQAQA--A PSFLERLQAT 301 350 ENSP00000301190/1-452 LSLPFAPSPQ EGGVLDHLVT ATTSLASPFV TTACHTLCPD HPPSLGTRSK ENSBTAP00000022764/1-382 LTLPFVQSPQ EGGVLDQLVT ITTSLASPFL TTACHTLCPD HPPALGTRRK bmy_19451T0/1-399 LSLPFAQSPQ EGGVLDHLVT VTTSLASPFL TTACHTLCPD HPPALGTRSK ENSTTRP00000004643/1-445 LSLPFAQSPQ EGGVLDHLVT VTTSLASPFL TTACHTLCPD HPPALGTRSK 351 400 ENSP00000301190/1-452 SVPELLGTAP PPPLVPQSPP GSPQRSPWVF VPYQSPQGIL SKCLQWLQPR ENSBTAP00000022764/1-382 SVPELLGTAP PPPPAPQPPQ EVP--GPRVF IPYQSPQGVL SMCPQWLQPR bmy_19451T0/1-399 SVPELLGTAP PPPPVPQLPQ EVP--GPRVF IPYQSPQGVL SMCHQWLQPR ENSTTRP00000004643/1-445 SVPELLGTAP PPPPVPQLP- GSP--WPRVF IPYQSPQGVL SMCHQWLQPR 401 450 ENSP00000301190/1-452 DSTSPRPQVP KILLSKASSS SHQCQPKPSP SGHQSLALPL WRYQELRIEK ENSBTAP00000022764/1-382 DSTSPRPRAP KILLSKAPSA GFQWKPELRS SGNRRLSLPV WRYQELRMER bmy_19451T0/1-399 DSTSPRPQAP KILLSKAPSS GIRWKPEPRS AGNRRLSLPV WRYQELRMER ENSTTRP00000004643/1-445 DSTSPRPRAP KILLSKAPSS GVQWKPEPRS AGNRRLSLPV WRYQELRMER 451 500 ENSP00000301190/1-452 RKQEEEARMA QK----- ENSBTAP00000022764/1-382 KRQ-EEAGLT QSQGKT- bmy_19451T0/1-399 RRQ-EEARLA QSQGTTG ENSTTRP00000004643/1-445 RRQ-EEARLA QSQ----