KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:18:55 2014 Check: 00 .. Name: ENSP00000358988/1-551 Len: 588 Check: 6053 Weight: 1.00 Name: ENSTTRP00000002966/1-545 Len: 588 Check: 9999 Weight: 1.00 Name: ENSBTAP00000022767/1-542 Len: 588 Check: 6364 Weight: 1.00 Name: bmy_15557T0/1-584 Len: 588 Check: 9892 Weight: 1.00 // 1 50 ENSP00000358988/1-551 MLCSLLLCEC LLLVAGYAHD DDWIDPTDML NYDAASGTMR KSQAKYGISG ENSTTRP00000002966/1-545 MLCSVLFCEC LWLITAYAHD DDWIDPTDML NYDAASGTMR KSQVKYGISE ENSBTAP00000022767/1-542 MLYSLLLCEC LWLITAYAHD DEWIDPTDML NYDAASGRMR KSQVKYGISE bmy_15557T0/1-584 MLCSVLFCEC LWLITSYAHD DDWIDPTDML NYDAASGTMR KSQVKYGISE 51 100 ENSP00000358988/1-551 EKDVSPDLSC ADEISECYHK LDSLTYKIDE CEKKKREDYE SQSNPVFRRY ENSTTRP00000002966/1-545 KEEVSPDLSH ADELSECYSR LDSLTYKIDE CEKQMRKDCE SQSNPVFRRY ENSBTAP00000022767/1-542 KEEVNPDLSC ANELSECYNR LDSLTYKIDE CEKQKRKDYE SQSNPVFRRY bmy_15557T0/1-584 KEEVSPDLSH ADELSECYSR LDSLTHKIDE CEKQKRKDYE SQSNPVFRRY 101 150 ENSP00000358988/1-551 LNKILIEAGK LGLPDENKGD MHYDAEIILK RETLLEIQKF LNGEDWKPGA ENSTTRP00000002966/1-545 LNKILIETRK LGLPDENKGD MHYDAEIILK RQTLLEIQKF LSGEDWKPGA ENSBTAP00000022767/1-542 LNKILIETKK LGLPDENKHD MHYDAEIILK RQTLLEIQKF LSGEDWKPGA bmy_15557T0/1-584 LNKILIETRK LGLPDENKVD MHYDAEIILK RQTLLEIQKF LSGEDWKPGA 151 200 ENSP00000358988/1-551 LDDALSDILI NFKFHDFETW KWRFEDSFGV DPYNVLMVLL CLLCIVVLVA ENSTTRP00000002966/1-545 LDDALSDILI NFKFHNFETW KWRFEDSFGV DPYNVFMMLL CLLCIVVLVA ENSBTAP00000022767/1-542 LDDALSDILI NFKFHDFETW KWRFEEFFGV DPYNVFMVLL CLLCIVALVA bmy_15557T0/1-584 LDDALSDILI NFKFHNFETW KWQFEDSFGV DPYNVLMMLL CLLCIMMLVA 201 250 ENSP00000358988/1-551 TELWTYVRWY TQLRRVLIIS FLFSLGWNWM YLYKLAFAQH QAEVAKMEPL ENSTTRP00000002966/1-545 TELWTYVRWY TQLRRVLFIS FLISLGWNWM YLYKXXXXXX XXXXXXXXXX ENSBTAP00000022767/1-542 TELWTYVRWY TQLKRVFFIS FLISLGWNWM YLYKLAFAQH QAEVAKMEPL bmy_15557T0/1-584 TELWTYVRWY TQLRRVLFIS FLISLGWNWM YLYKLAFAQH QAEVAKMEPL 251 300 ENSP00000358988/1-551 NNVCAKKMDW TGSIWEWFRS SWTYKDDPCQ KYYELLLVNP IWLVPPTKAL ENSTTRP00000002966/1-545 XXXXXXXXXX XXXXXXWLRS SWTYKDDSCQ KYYELLLVNP IWLVPPTKAL ENSBTAP00000022767/1-542 NNVCAEKMNW SGSLWEWLRS SWTYKDDPCQ KYYELLLVNP IWLVPPTKAL bmy_15557T0/1-584 NNVCAENMDW TGSLLEWLRS SWTYKDDSCQ KYYELLLVNP VLLVPPTKAL 301 350 ENSP00000358988/1-551 AVTFTTFVTE PLKHIGKGTG EFIKALMKEI PALLHLPVLI IMALAILSFC ENSTTRP00000002966/1-545 AVTFTNFVTE PLKHIGKGTG EFIKALMKEI PVLLQIPVLI IMALAVLXXX ENSBTAP00000022767/1-542 AVTFTNFVTE PLKHVGKGAG EFIKALMKEI PVLLHIPVLI IMALAVLSFC bmy_15557T0/1-584 AVTFTNFVTE PLKHIGKGVG EFIKALMKEI PVLLHIPVLI IMALAVLSFC 351 400 ENSP00000358988/1-551 YGAGKSVHVL RHIGGPESEP PQALRPRDRR RQEEIDYRPD GGAGDADFHY ENSTTRP00000002966/1-545 XXXXXXXXXX XXXXXXXXXX XXXXXXXERR WQQEIDYRPH GGAGDADFYY ENSBTAP00000022767/1-542 YGAGKSVNML RHVGGPEREA PQALQAGERR RQQKIDYRPH GGAGDADFYY bmy_15557T0/1-584 YGAGKSVTML RHVGGPEREP PQALQPGERR WQQEIDYRPH GGAGDADFYY 401 450 ENSP00000358988/1-551 RGQMGPTEQG PYAKTYEGRR EILRERDVDL RFQTGNKSPE VLRAFDVPDA ENSTTRP00000002966/1-545 RGQIGPIEQG RNDKTCEGRR DVLRKRDVDL RFQTGNKSLE VLPAFDLPDA ENSBTAP00000022767/1-542 RGQISPIEQG PNDNTYEGRR DVLRERDVGL RFQTGNKSPE VLRPFDLQEA bmy_15557T0/1-584 RGQIGPIEQG PNDKTREGRR DVLRERDVDL RFQTGNKSLE VLPAFDLPDA 451 500 ENSP00000358988/1-551 EAREHPTVVP SHKSPVLDTK PKETGGILGE GTPKESSTES SQSAKPVSGQ ENSTTRP00000002966/1-545 EAREHPKVVP SHESPILDTK PKEIGGISGE STL----TES SQSAKPVSGQ ENSBTAP00000022767/1-542 EAREHPKVVP GLKSPNLESK PREMGEIPGE STPTESSTES SQPAKPVSGQ bmy_15557T0/1-584 EAREHPKVVP SHKSPILDTK PKEIGGISGE STL----TES SQSAKPVSGQ 501 550 ENSP00000358988/1-551 DTSGNTEGSP AAEKAQLKSE AAGSPDQGST YSPARGVAG- ---PRGQDPV ENSTTRP00000002966/1-545 KIPECVEGSP AVEKAQLRTD ATGGPEEGST SSPA--AVR- ---VCGRDPD ENSBTAP00000022767/1-542 KVSEGVEGCP AVEKAQLRTD AAGGPEEGST CSPASTAVE- ---------- bmy_15557T0/1-584 KIPESVEGSP AVEKAQLRTD ATGGPEEGST SSPASTAVRH FSAATESASP 551 600 ENSP00000358988/1-551 SSPC------ ---------- ---------- --G----- ENSTTRP00000002966/1-545 CSPC------ ---------- ---------- --G----- ENSBTAP00000022767/1-542 --VC------ ---------- ---------- --G----- bmy_15557T0/1-584 VSVCLVLVLQ TLVFHQKDNH LGMKSTLTAR QQGTAVER