KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:18:56 2014 Check: 00 .. Name: ENSP00000379138/1-609 Len: 610 Check: 9196 Weight: 1.00 Name: ENSBTAP00000022772/1-610 Len: 610 Check: 3124 Weight: 1.00 Name: bmy_20628T0/1-464 Len: 610 Check: 8591 Weight: 1.00 Name: ENSTTRP00000006228/1-610 Len: 610 Check: 9299 Weight: 1.00 // 1 50 ENSP00000379138/1-609 MKWVESIFLI FLLNFTESRT LHRNEYGIAS ILDSYQCTAE ISLADLATIF ENSBTAP00000022772/1-610 MKWVVSFFLL FLLNFSDSRT MHKNAYGIDS ILDSSPCSSG TNLVGLATIF bmy_20628T0/1-464 ---------- ---------- ----MFGVA- ---------- ---------- ENSTTRP00000006228/1-610 MKWEVSIFLI FLLNFTESRT MQKNAYGIAS ILDSSPCSAE MNVVDLATIF 51 100 ENSP00000379138/1-609 FAQFVQEATY KEVSKMVKDA LTAIEKPTGD EQSSGCLENQ LPAFLEELCH ENSBTAP00000022772/1-610 FAQSVQGATY EEVSQMVKDV LTIIEKPTGS KQPAGCLENQ VSAFLEEICR bmy_20628T0/1-464 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006228/1-610 FAQFVQEATY KEVSQMVKDV LTVIEKSTGS EQPAGCLENQ VSAFLEEICH 101 150 ENSP00000379138/1-609 EKEILEKYGH SDCCSQSEEG RHNCFLAHKK PTPASIPLFQ VPEPVTSCEA ENSBTAP00000022772/1-610 EKEIPEKYGL SDCCSRTGEE RHDCFLAHKK AAPASIPPFP VLEPVTSCKS bmy_20628T0/1-464 ---------- ---------- ---------- --PAELLPYE I--------- ENSTTRP00000006228/1-610 EKEIPGKYGL SDCCSQSGEE RHDCFLAHKK AVPASIPPFQ VPEPVTSCKA 151 200 ENSP00000379138/1-609 YEEDRETFMN KFIYEIARRH PFLYAPTILL WAARYDKIIP SCCKAENAVE ENSBTAP00000022772/1-610 YKENRELFIN RYIYEIARRH PVLYAPTILS VANQYNKIIP HCCKAENATE bmy_20628T0/1-464 ---------- RYVYEIARRH PFLYAPTILS LAAQYDKXIP PCCKAENAVE ENSTTRP00000006228/1-610 YEEDRELFMN RYVYEIARRH PFLYAPTILS LAAQYDKVIP PCCKAENAVE 201 250 ENSP00000379138/1-609 CFQTKAATVT KELRESSLLN QHACAVMKNF GTRTFQAITV TKLSQKFTKV ENSBTAP00000022772/1-610 CFETKVTSIT KELRESSLLN QHICAVMGKF GPRTFRAITV TKVSQKFPKA bmy_20628T0/1-464 CFQTKAASIT KELRESSLLN QHICAVMRKF GPRTFRAITV TKLSQKFPKA ENSTTRP00000006228/1-610 CFQTKAASIT KELRESSLLN QHICAVMRKF GPRTFRAITV TKLSQKFPKA 251 300 ENSP00000379138/1-609 NFTEIQKLVL DVAHVHEHCC RGDVLDCLQD GEKIMSYICS QQDTLSNKIT ENSBTAP00000022772/1-610 NFTEIQKLVM DVAHIHEECC KGNVLECLQD GERVMSYICS QQDILSRQIA bmy_20628T0/1-464 NFTEIQKLVV DVAHVHEECC RGNVLECLQD GEKIMSYICS QQDILSSKIA ENSTTRP00000006228/1-610 NFTEIQRLVV DVAHVHEECC KGNVLECLQD GEKIMSYICS QQDILSSKIA 301 350 ENSP00000379138/1-609 ECCKL-TTLE RGQCIIHAEN DEKPEGLSPN LNRFLGDRDF NQFSSGEKNI ENSBTAP00000022772/1-610 ECCKLPTTLE LGHCIIHAEN DDKPEGLSPN VNRFLGDRDF NQLSSRDKDL bmy_20628T0/1-464 ECCKLPTTLE LGHCIIHAEN DDKPEGLSPT LNRFLGETDF NQLSSREKDL ENSTTRP00000006228/1-610 ECCKLPTALE LGHCIIHAEN DDKPEGLSPT LNRFLGETDF NQLSSREKDL 351 400 ENSP00000379138/1-609 FLASFVHEYS RRHPQLAVSV ILRVAKGYQE LLEKCFQTEN PLECQDKGEE ENSBTAP00000022772/1-610 SMARFTYEYS RRHTKLAVPI ILRVAKGYQE LLEKCSQSEN PSECQDKGEE bmy_20628T0/1-464 YMARFTYEYS RRHTKLAVPI ILRVAKGYQE LLEKCSQSEN PPECQDKGEE ENSTTRP00000006228/1-610 YMARFTYEYS RRHTKLAVPI ILRVARGYQE LLEKCSQSGN PPECQDKGEE 401 450 ENSP00000379138/1-609 ELQKYIQESQ ALAKRSCGLF QKLGEYYLQN AFLVAYTKKA PQLTSSELMA ENSBTAP00000022772/1-610 ELEKYIQESQ ALAKRSCGLF QKLGEYYLQN AFLVAYTKKA PQLTSPELMA bmy_20628T0/1-464 ELEKYIQESQ ALAKRSCGLF QKLGEYYLQN AFLVAYTKKA PQLTPAELMT ENSTTRP00000006228/1-610 ELEKYIQESQ ALAKRSCGLF QKLGEYYLQN AFLVAYTKKA PQLTSAELMT 451 500 ENSP00000379138/1-609 ITRKMAATAA TCCQLSEDKL LACGEGAADI IIGHLCIRHE MTPVNPGVGQ ENSBTAP00000022772/1-610 LTRKMANAGA ICCHLSEDKQ LACGEGVADL IIGHLCIRHE ENPINPGVDQ bmy_20628T0/1-464 LTRKMATTGA TCCHLSEDKQ LACGEGAADL IIGLLCIRHE ETPVNPGVGQ ENSTTRP00000006228/1-610 LTRKMATTGA TCCHLSEDKQ LACGEGSADL IIGLLCIRHE ETPVNPGVGQ 501 550 ENSP00000379138/1-609 CCTSSYANRR PCFSSLVVDE TYVPPAFSDD KFIFHKDLCQ AQGVALQTMK ENSBTAP00000022772/1-610 CCTSSYSNRR PCFSSLVVDE TYVPPPFSDD KFIFHKDLCQ VQGVPLQTMK bmy_20628T0/1-464 CCTSSYANRR PCFSSLVVDE TYVSPPFSDD KFIFHKDLCQ AQGVALQTMK ENSTTRP00000006228/1-610 CCTSSYANRR PCFSSLVVDE TYVSPPFSDD KFIFHKDLCQ AQGVALQTMK 551 600 ENSP00000379138/1-609 QEFLINLVKQ KPQITEEQLE AVIADFSGLL EKCCQGQEQE VCFAEEGQKL ENSBTAP00000022772/1-610 QQFLINLVKQ KPQITEEQLE TVVADFSGLL EKCCQSQEQE VCFTEEGPAL bmy_20628T0/1-464 QQFLINLVKQ KPQITEEQLE AVIADFSGLL EKCCQGQGQE VCFEEEGPAL ENSTTRP00000006228/1-610 QQFLINLVKQ KPQITEEQLE AVIADFSGLL ERCCQGQGQE VCFEEEGPAL 601 650 ENSP00000379138/1-609 ISKTRAALGV ENSBTAP00000022772/1-610 ISKTRAALGV bmy_20628T0/1-464 ISKTRAALGV ENSTTRP00000006228/1-610 ISKTRAALGV