KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:03 2014 Check: 00 .. Name: ENSP00000328069/1-330 Len: 402 Check: 2902 Weight: 1.00 Name: BACU014287/1-359 Len: 402 Check: 8913 Weight: 1.00 Name: bmy_05172T0/1-345 Len: 402 Check: 8007 Weight: 1.00 Name: ENSTTRP00000000896/1-327 Len: 402 Check: 4659 Weight: 1.00 Name: ENSBTAP00000022806/1-306 Len: 402 Check: 994 Weight: 1.00 // 1 50 ENSP00000328069/1-330 -MAFLPSWVC -----VLVGS -FSASLAGTS NLSETEPPLW KESPGQLSDY BACU014287/1-359 -MVPIPTLLS RTKYEANLGY KVTFRICNVK SLEMDETEHM TTVPGQDEEK bmy_05172T0/1-345 -MAFLPPWXC -----ALVGC -ISVSLAGAF SLSDLYPPLW SESPGQFSDY ENSTTRP00000000896/1-327 -MAFLPPWAC -----ALVGC -ISVSLAGAF SLSDLYPPLW NESPGQFSDY ENSBTAP00000022806/1-306 MLSLLAPSAC -----VLVGC -MFVSSAEVF SLSDQYLPLW NETPGQFSDY 51 100 ENSP00000328069/1-330 RVENSMYIIN ---PWVYLER MGMYKIILNQ TARYFAKFAP DNEQNILWGL BACU014287/1-359 RHEPGLDLPK FPAPWSLI-- --VSSDLSEN CPSTLQDYGP ALSQE----- bmy_05172T0/1-345 RVENGKYVID ---PWVYSKR MGMYKILMNK TASYFEKFAP DNEQNFLWGL ENSTTRP00000000896/1-327 RVENGKYVID ---PWVYSKR MGMYKILMNK TASYFEKFAP DNEQNFLWGL ENSBTAP00000022806/1-306 SVENGKYIID ---PWVYPKR MGMYKILLNK TANYFEKFAP DNEQNFLWGL 101 150 ENSP00000328069/1-330 PLQYGWQYRT GRLADPTRRT NCGYESGDHM CISVDSWWA- ---------- BACU014287/1-359 ---------- GRLVDPSRRT DCGYESGDRL CISVDSWWA- ---------- bmy_05172T0/1-345 PLQHGWQYTT GRLVDPSRRT DCGYDSGDRL CISVDSWWAD YFKISSITFV ENSTTRP00000000896/1-327 PLQHGWQYTT GRLVDPSRRT DCGYEYGDRL CISVDSWWA- ---------- ENSBTAP00000022806/1-306 PLQHGWQYKT GRLVDPTRMT DCGYESGDRL CISVDSWWA- ---------- 151 200 ENSP00000328069/1-330 ---------- --DLNYFLSS LPFLAAVDSG VMGISSDQVR LLPPPKNERK BACU014287/1-359 ---------- --DINYFLCA LPFLAAVDSG IMGISSDQVL LLPPPKDQTK bmy_05172T0/1-345 SACGNNKYFA ITDINYFLCA LPFLAAVDSG IMGISSDQVL LLPPPKDQTK ENSTTRP00000000896/1-327 ---------- --DINYFLCA LPFLAAVDSG IMGISSDQVL LLPPPKDQTK ENSBTAP00000022806/1-306 ---------- --DMNYFLCA LPFLAAVDSG IMGISSDQVL LLPPSKDQTK 201 250 ENSP00000328069/1-330 FCYDVSSCRS SFPETMNKWN TFYQYLQSPF SKFDDLLKYL WAAHTSTLAD BACU014287/1-359 FCLNISSCQS SFPKTMNKWN ALYKRLQSPS SSFDDLLKYL WDAHLSALKD bmy_05172T0/1-345 FCLNISSCQS SFPKTMNKWN ALYKRLQSPS SSFDDLLKYL WDAHLSALKD ENSTTRP00000000896/1-327 FCLNISSCQS SFPKTMKKWN ALYKRLQSPS SSFDDLLKYL WDAHLSSLKD ENSBTAP00000022806/1-306 FCLNVSSCQS SFPSTMRKWN ALYKHLQSPS SSFKDLLKYL WEAHVSSLKD 251 300 ENSP00000328069/1-330 NIKSFEDRYD YYSKAEAHFE RSWVLAVDHL AAVLFPTTLI RSYKFQKGMP BACU014287/1-359 AYKIFEDRLE YYSKPEADFG RDWCVALDYL AAACFPTTFI RISEFQKGLP bmy_05172T0/1-345 AYKIFEDRLE YYSKPEADFG RDWCVALDYL AAACFPTTFI RISEFQKGLP ENSTTRP00000000896/1-327 AYKIFEDXXX XXXKPEAD-- KRLVCALDYL AAASFPTT-I QVSGFQKGLP ENSBTAP00000022806/1-306 GYKIFEDRLE YYSKPEAGFG KDWCVVLDYL AAASFPTIFS TVSEFQQALP 301 350 ENSP00000328069/1-330 PRILLNTDVA PFISDFTAFQ NVVLVLLNML DNVDKSI--- ---------- BACU014287/1-359 PRVLVDGDKA PFISDFTDFQ NTVLLGLNLL HEVDNATVMV PGQCSQSVAA bmy_05172T0/1-345 PRVLVDGDKA PFISDFTDFQ NTVLLGLSLL HEVDNAT--- ---------- ENSTTRP00000000896/1-327 PRVLVDGDKA PFISDFTDFQ NTVVLGLNLL HQVDNAT--- ---------- ENSBTAP00000022806/1-306 PRVLVDGDKA PFISDFTDLQ NIVLLGLNLL YKVDSST--- ---------- 351 400 ENSP00000328069/1-330 ---------- ---------- GYLCTEKSNV YRDHSESSSR SYGNNS---- BACU014287/1-359 FLHTVSSRLK ILTSVVLPAP GLYIIHISPA ERHYSVGESL DISLTSSHTL bmy_05172T0/1-345 ---------- ---------- GKGLINNTLK KINIVLNR-- ---------- ENSTTRP00000000896/1-327 ---------- ---------- DYLCMENFNE DTGCKEASSR DFSNPC---- ENSBTAP00000022806/1-306 ---------- ---------- G--------- ---------- ---------- 401 450 ENSP00000328069/1-330 -- BACU014287/1-359 LV bmy_05172T0/1-345 -- ENSTTRP00000000896/1-327 -- ENSBTAP00000022806/1-306 --