KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:05 2014 Check: 00 .. Name: ENSTTRP00000010213/1-923 Len: 928 Check: 304 Weight: 1.00 Name: ENSP00000374552/1-923 Len: 928 Check: 2196 Weight: 1.00 Name: ENSBTAP00000022820/1-869 Len: 928 Check: 2576 Weight: 1.00 Name: bmy_12833T0/1-616 Len: 928 Check: 4843 Weight: 1.00 Name: BACU012138/1-928 Len: 928 Check: 8154 Weight: 1.00 // 1 50 ENSTTRP00000010213/1-923 MAEGNNNEEV IHLNNFHCHR GRXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000374552/1-923 MEEGNNNEEV IHLNNFHCHR GQEWINLRDG PITISDSSDE ERIPMLVTPA ENSBTAP00000022820/1-869 MAEGNSSEEV IHLNNFHCHR GQDWINLRDG PITISDSSDE EGVPMLVTPA bmy_12833T0/1-616 ---------- ---------- ---------- ---------- ----MLVTPA BACU012138/1-928 MAEGNNNEEV IHLNNFHCHR GRDWISLRDG PITISDSSDE EGVPMLVTPA 51 100 ENSTTRP00000010213/1-923 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000374552/1-923 PQQHEEEDLD DDVILTETNK PQRSRPNLIK PAAQWQDLKR LGEERPKKSR ENSBTAP00000022820/1-869 PQQHD-EDLD DDVILAE--- ---------- ---------- ---------- bmy_12833T0/1-616 PQQHDEEDLD DDVILAETNK PQTSRPNLIK PAAQWQDLKR WGEERPKKSR BACU012138/1-928 PQQHDEEDLD DDVILAETNK PQTSRPNLIK PAAQWQDLKR WGEERPKKSR 101 150 ENSTTRP00000010213/1-923 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000374552/1-923 AAFESDKSSY FSVCNNPLFD SGAQDDSEDD YGEFLDLGPP GISEFTKPSG ENSBTAP00000022820/1-869 ---------- ---------- ----DDSEDD YSEFLDLGPP GVSGFMKPSG bmy_12833T0/1-616 AAFESDKNGF FSVCNSSLFG SGAQDNSEDN YGEFLDLGPP GVSEFIKPSG BACU012138/1-928 AAFESDKNGF FSVCNSSLFG SGAQDNSEDN YGEFLDLGPP GVSEFIKPSG 151 200 ENSTTRP00000010213/1-923 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000374552/1-923 QTEREPKPGP SHNQAANDIV NPRSEQKVII LEEGSLLYTE SDPLETQNQS ENSBTAP00000022820/1-869 QTEREPKPGP SHNQATNDFI NPRSEQKVII LKEGN-LFPE ADPLDTQNQS bmy_12833T0/1-616 QTEREPKPGP SHNQATNDIV NHRAEQKIII LKEGSLLFPE SDPLDTQNQS BACU012138/1-928 QTEREPKPGP SHNQATNDIV NHRAEQKIII LKEGSLLFPE SDPLDTQNQS 201 250 ENSTTRP00000010213/1-923 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000374552/1-923 SEDSETELLS NLGESAALAD DQAIEEDCWL DHPYFQSLNQ QPREITNQVV ENSBTAP00000022820/1-869 SEESETELLS NLGESSDILD DQAIEEDCWL DHSYFQSLNQ QPREVPSQVV bmy_12833T0/1-616 SEDSETELLS NLGESTDILD DQAIEEDCWL DHPYFQSLNQ QPREITNQVV BACU012138/1-928 SEDSETELLS NLGESADILD DQAIEEDCWL DHPYFQSLNQ QPREITNQVV 251 300 ENSTTRP00000010213/1-923 XXXXXXXXXX XXXXXXXX-- ---XXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000374552/1-923 PQERQPEAEL GRLLFQHE-- ---FPGPAFP RPEPQQGGIS GPSSPQPAHP ENSBTAP00000022820/1-869 PQERRPEAEL GPLLYQHEPR GSAFPRPAFA RPEPQQDWIP DPASPRPAHP bmy_12833T0/1-616 PQERQPEVEL GPLLYQHEPS GSAFPRPAFP RPEPQQDGIP GPSSPQPAHP BACU012138/1-928 PQERQPEVEL GPLLYQHEPS GSAFPRPAFP RAEPQQDGIP GPSSPQPAHP 301 350 ENSTTRP00000010213/1-923 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000374552/1-923 LGEFEDQQLA SDDEEPGPAF PMQESQEPNL ENIWGQEAAE VDQELVELLV ENSBTAP00000022820/1-869 LGELEDQQLA IDDEEPGPAF PLEETRQPNL GNLWGQEASY VDRELIALLV bmy_12833T0/1-616 LGELEDQQLA IDDEEPGPAF PLQGSQEPNL ENLWGQEAPD VDQELIALLV BACU012138/1-928 LGELEDQQLA IDDEEPGPAF PLQGSQEPNL ENLWGQEASD VDQELIALLV 351 400 ENSTTRP00000010213/1-923 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXL CNFLLENPDY PKREDRVLIN ENSP00000374552/1-923 KETEARFPDV ANGFIEEIIH FKNYYDLNVL CNFLLENPDY PKREDRIIIN ENSBTAP00000022820/1-869 KETEVRFPDV ANGYVEEIIH LKNYYDLNVL CNFLLENPDY PKREDRVLMN bmy_12833T0/1-616 KETEVRFPDV AHG------- ---------L CNFLLENPDY PKREDR---- BACU012138/1-928 KETEVRFPDV AHGYIEEIIH LKNYYDLNVL CNFLLENPDY PKREDRVLIN 401 450 ENSTTRP00000010213/1-923 PNSSLLASQD EIKLPKIDFF DYSKLAPLDQ RCFIQAADLL MADFKMLSSQ ENSP00000374552/1-923 PSSSLLASQD ETKLPKIDFF DYSKLTPLDQ RCFIQAADLL MADFKVLSSQ ENSBTAP00000022820/1-869 PSSSLLASQD EMKLPTVDFF DYSKLAPLDQ HCFIQAADLL MADFKMLSSQ bmy_12833T0/1-616 ---------- ---LPKIDFF DYSKLAPLDQ RCFIQAADLL MADFKMLSSQ BACU012138/1-928 PNSSLLASQD EIKLPKIDFF DYSKLAPLDQ RCFIQAADLL MADFKMLSSQ 451 500 ENSTTRP00000010213/1-923 DIKWALHELK GHYAITRKAF SDAIKKWQEL SPETSGKRKK RKEMNQYSYI ENSP00000374552/1-923 DIKWALHELK GHYAITRKAL SDAIKKWQEL SPETSGKRKK RKQMNQYSYI ENSBTAP00000022820/1-869 DIKWALHELK GHYAITRKAF SDAIKKWQEL SPETSGKRKK RKEMNQYSYI bmy_12833T0/1-616 DIKWALHELK GHYAITRKAF SDAIKKWQEL SPETSGKRKK RKEMNQYSYI BACU012138/1-928 DIKWALHELK GHYAITRKAF SDAIKKWQEL SPETSGKRKK RKEMNQYSYI 501 550 ENSTTRP00000010213/1-923 DFKFEQGDKK IEKRMFFLEN KRRHCRSYDR RALLPAVQQE QEFYEQKIKE ENSP00000374552/1-923 DFKFEQGDIK IEKRMFFLEN KRRHCRSYDR RALLPAVQQE QEFYEQKIKE ENSBTAP00000022820/1-869 DFKFEQGDKK IEKRMFFLEN KRRHCRSYDR RALLPAVQQE QEFYEQKIKE bmy_12833T0/1-616 DFKFEQGDKK IEKRMFFLEN KRRHCRSYDR RALLPAVQQE QEFYEQKIKE BACU012138/1-928 DFKFEQGDKK IEKRMFFLEN KRRHCRSYDR RALLPAVQQE QEFYEQKIKE 551 600 ENSTTRP00000010213/1-923 MAEHEDFLLA LQMNEEQYQK DGQLIECRCC YGEFPFEELT QCADAHLFCK ENSP00000374552/1-923 MAEHEDFLLA LQMNEEQYQK DGQLIECRCC YGEFPFEELT QCADAHLFCK ENSBTAP00000022820/1-869 MAEHEDFLLA LQMNEEQYQK DGQLIECRCC YGEFPFEELT QCADAHLFCK bmy_12833T0/1-616 MAEHEDFLLA LQMNEEQYQK DGQLIECRCC YGEFPFEELT QCADAHLFCK BACU012138/1-928 MAEHEDFLLA LQMNEEQYQK DGQLIECRCC YGEFPFEELT QCADAHLFCK 601 650 ENSTTRP00000010213/1-923 ECLIRYAQEA VFGSGKSELS CMEGSCTCSF PTSELEKVLP QTILYKYYER ENSP00000374552/1-923 ECLIRYAQEA VFGSGKLELS CMEGSCTCSF PTSELEKVLP QTILYKYYER ENSBTAP00000022820/1-869 ECLIRYAQEA VFGSGKSELS CMEGSCTCSF PASELEKVLP QTILYKYYER bmy_12833T0/1-616 ECLIRYAQEA VFGSGKSELS CMEGSCTCSF PTSELEKVLP QTILYKYYER BACU012138/1-928 ECLIRYAQEA VFGSGKSELS CMEGSCTCSF PTSELEKVLP QTILYKYYER 651 700 ENSTTRP00000010213/1-923 KAEEEVAAAY ADELVRCPSC SFPALLDSDV KRFSCPNPRC RKETCRKCQG ENSP00000374552/1-923 KAEEEVAAAY ADELVRCPSC SFPALLDSDV KRFSCPNPHC RKETCRKCQG ENSBTAP00000022820/1-869 KAEEEVAAAY ADELVRCPSC SFPALLDSDV KRFSCPNPRC RKETCRKCQG bmy_12833T0/1-616 KAEEEVAAAY ADELVRCPSC SFPALLDSDV KRFSCPNPRC RKV------- BACU012138/1-928 KAEEEVAAAY ADELVRCPSC SFPALLDSDV KRFSCPNPRC RKETCRKCQG 701 750 ENSTTRP00000010213/1-923 LWKEHNGLTC EELAEKDDIK YRTSIEEKMT AARIRKCHKC GTGLIKSEGC ENSP00000374552/1-923 LWKEHNGLTC EELAEKDDIK YRTSIEEKMT AARIRKCHKC GTGLIKSEGC ENSBTAP00000022820/1-869 LWKEHNGLTC EELAEKDDIK YRTSIEEKMT AARIRKCHKC GTSLIKSEGC bmy_12833T0/1-616 ---------- ---------- ---------- ---------- ---------- BACU012138/1-928 LWKEHNGLTC EELAEKDDIK YRTSIEEKMT AARIRKCHKC GTGLIKSEGC 751 800 ENSTTRP00000010213/1-923 NRMSCRCGAQ MCYLCRVSIS GYDHFCQHPR SPGAPCQECS RCSLWTDPTE ENSP00000374552/1-923 NRMSCRCGAQ MCYLCRVSIN GYDHFCQHPR SPGAPCQECS RCSLWTDPTE ENSBTAP00000022820/1-869 NRMSCRCGAQ MCYLCRVSIN GYDHFCQHPR SPGAPCQECS RCSLWTDPTE bmy_12833T0/1-616 ---------- ---------- ---------- ---------- ---------- BACU012138/1-928 NRMSCRCGAQ MCYLCRVSIN GYDHFCQHPR SPGAPCQECS RCSLWTDPTE 801 850 ENSTTRP00000010213/1-923 DDEKLIEEIQ KEAEEEQKRK NGENTFKRIG PPLEKPPEKV QRIEALPRPV ENSP00000374552/1-923 DDEKLIEEIQ KEAEEEQKRK NGENTFKRIG PPLEKPVEKV QRVEALPRPV ENSBTAP00000022820/1-869 DDEKLIEEIQ KEAEEEQKRK NGENTFKRIG PPLEKPPEKV QRTEALPRPV bmy_12833T0/1-616 ---------- ---------- ---------- ---------- ---------- BACU012138/1-928 DDEKLIEEIQ KEAEEEQKRK NGENTFKRIG PPLEKPPEKV QRIEALPRPV 851 900 ENSTTRP00000010213/1-923 PQNLHQPQIP PYAFVHPAFP LPPVRPMFNN FPLNMGPIPA PYVPPLPNVR ENSP00000374552/1-923 PQNLPQPQMP PYAFAHPPFP LPPVRPVFNN FPLNMGPIPA PYVPPLPNVR ENSBTAP00000022820/1-869 PQNLHQPQIP AYAFVHPPFP LPPVRPVFNN FPLNMGPIPA PYVPPLPNMR bmy_12833T0/1-616 ---------- ---------- ---------- ---------- ---------- BACU012138/1-928 PQNLHQPQIP PYAFVHPAFP LPPVRPMFNN FPLNMGPIPA PYVPPLPNVR 901 950 ENSTTRP00000010213/1-923 VNYDFAPVHM PLEHNLPMHF GPQPRHRF ENSP00000374552/1-923 VNYDFGPIHM PLEHNLPMHF GPQPRHRF ENSBTAP00000022820/1-869 VNYEFAPIHL PLEHNLPMHF GPQPRHRF bmy_12833T0/1-616 ---------- ---------- -------- BACU012138/1-928 VNYDFAPVHV PLEHNLPMHF GPQPRHRF