KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:08 2014 Check: 00 .. Name: BACU005340/1-277 Len: 411 Check: 3253 Weight: 1.00 Name: ENSP00000255681/1-325 Len: 411 Check: 206 Weight: 1.00 Name: bmy_10860T0/1-204 Len: 411 Check: 223 Weight: 1.00 Name: ENSTTRP00000009701/1-259 Len: 411 Check: 6837 Weight: 1.00 Name: ENSBTAP00000022832/1-325 Len: 411 Check: 432 Weight: 1.00 // 1 50 BACU005340/1-277 ---------- ---------- ---------- ---------- ---------- ENSP00000255681/1-325 MSLQSRLSGR LAQLRAAGQL LVPPRPRPGH LAGATRTRSS TCGPPAFLGV bmy_10860T0/1-204 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009701/1-259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022832/1-325 MFLQSRVSRL LAQLRAAGQL LGAPRPWPGP SPGATRTRSS ACGPPASLSA 51 100 BACU005340/1-277 ---------- --MPGSPALA PRQSSLDIRP LVFAAN---- ---------- ENSP00000255681/1-325 FGRRARTSAG VGAWGAAAVG RTAGVRTWAP LAMAAKVDLS TSTDWKEAKS bmy_10860T0/1-204 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009701/1-259 ---------- ------AAVG RRAGVRTWAP LAMAAKVDLS TSTEWKEAKS ENSBTAP00000022832/1-325 HHPRARTSAG VGAWGAAAVG RRAGVRTWAP LAMAAKVDLS TSTDWKEAKS 101 150 BACU005340/1-277 -LLGWEGGVL TSHVSAVVQP WFTVIP-WAA LTTAAAMQFV ---------- ENSP00000255681/1-325 FLKGLSDKQR EEHYFCKDFV RLKKIPTWKE MAKGVAVKVE EPRYKKDKQL bmy_10860T0/1-204 ---------- ---------- ---------- ---------- ---MKPDTRL ENSTTRP00000009701/1-259 FLKGLSDKQR EEHYFCRDFV RLKKIPTWKE AAKGVTVKVE EPKYKKDKQL ENSBTAP00000022832/1-325 FLKGLSDKQR EEHYFCRDFV RLKKIPTWKE TAKGVTVKVE EPKYKKDKQL 151 200 BACU005340/1-277 ---------- ---------- -PSGCSSVSP PVLDGCIHRA AGPLLTDECR ENSP00000255681/1-325 NEKISLLRSD ITKLEVDAIV NAANSSLLGG GGVDGCIHRA AGPLLTDECR bmy_10860T0/1-204 ---------- ---------- -AGPAASALG DWVDGCIHRA AGPLLTDECR ENSTTRP00000009701/1-259 NEKISLFRGD ITKLEVDAIV NAXXXXXXXX XXXDGCIHRA AGPLLTDECR ENSBTAP00000022832/1-325 NEKISLFRGD ITKLEVDAIV NAANSSLLGG GGVDGCIHRA AGPLLTDECR 201 250 BACU005340/1-277 TLQSCETGKA KITCGYRLPA KY-------- ---------- -------VIH ENSP00000255681/1-325 TLQSCKTGKA KITGGYRLPA KY-------- ---------- -------VIH bmy_10860T0/1-204 TLQSCETGKA KITCGYRLPA KWPRPAGGKA EDRTEPPAGL ISSPPTDVIH ENSTTRP00000009701/1-259 TLQSCETGKA KITCGYRLPA KY-------- ---------- -------VIH ENSBTAP00000022832/1-325 TLQNCETGKA KITCGYRLPA KY-------- ---------- -------VIH 251 300 BACU005340/1-277 TVGPIAHGEP SASQAAELRS CYLSSLDLLL EHRLRSVAFP CISTGVFGYP ENSP00000255681/1-325 TVGPIAYGEP SASQAAELRS CYLSSLDLLL EHRLRSVAFP CISTGVFGYP bmy_10860T0/1-204 TVGPIAHGEP SASQAAELRS CYLSSLDLLL EHRLRSVAFP CISTGVFGYP ENSTTRP00000009701/1-259 TVGPIAHGEP SASQAAELRS CYLSSLDLLL EHRLRSVAFP CISTGVFGYP ENSBTAP00000022832/1-325 TVGPIAHGEP SASQAAELRS CYLSSLDLLL EHRLRSAAFP CISTGVFGYP 301 350 BACU005340/1-277 NEAAAEVVLT TLREWLEQHK DKAEQALAQV DRLIICVFLE KDENIYRQRF ENSP00000255681/1-325 CEAAAEIVLA TLREWLEQHK DK-------V DRLIICVFLE KDEDIYRSRL bmy_10860T0/1-204 NEAAAEVVLT TLREWLEQHK DKAEQALAQV DRLIICVFLE KDENIYRQRF ENSTTRP00000009701/1-259 NEAAAEVVLT TLREWLEQHK DK-------V DRLIICVFLE KDENIYRQRF ENSBTAP00000022832/1-325 NEAAAEVVLT ALREWLEQHK DK-------V DRLIICVFLE KDENIYRERL 351 400 BACU005340/1-277 PHYFPVGTYP VVRAPASPCP APPPSTPGGL SLSSAFQHDG SPPPTLTRTG ENSP00000255681/1-325 PHYFPVA--- ---------- ---------- ---------- ---------- bmy_10860T0/1-204 PHYFPVDSSG PTGPRSQL-- ---------- ---------- ---------- ENSTTRP00000009701/1-259 PHYFPVA--- ---------- ---------- ---------- ---------- ENSBTAP00000022832/1-325 PHYFPVA--- ---------- ---------- ---------- ---------- 401 450 BACU005340/1-277 KQGLALRVAA H ENSP00000255681/1-325 ---------- - bmy_10860T0/1-204 ---------- - ENSTTRP00000009701/1-259 ---------- - ENSBTAP00000022832/1-325 ---------- -