KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:12 2014 Check: 00 .. Name: bmy_18721T0/1-236 Len: 452 Check: 1398 Weight: 1.00 Name: ENSP00000218075/1-452 Len: 452 Check: 5593 Weight: 1.00 Name: ENSBTAP00000022869/1-452 Len: 452 Check: 4173 Weight: 1.00 Name: BACU018325/1-431 Len: 452 Check: 8305 Weight: 1.00 Name: ENSTTRP00000000084/1-452 Len: 452 Check: 4979 Weight: 1.00 // 1 50 bmy_18721T0/1-236 ---------- ---------- --------MR DNASG----- ----NEFFKK ENSP00000218075/1-452 MNRQLVNILT ALFAFFLETN HFRTAFCKDH DSRSGKQPSQ TLSPSDFLDK ENSBTAP00000022869/1-452 MNRQLVSILT TLFAFFLETN HFRAAFCKDH DSRSGKQPSQ TLSPSDFLDK BACU018325/1-431 ---------- ---------- -FRAAFCKDH DSRSGKQPSQ TLSPSDFLDK ENSTTRP00000000084/1-452 MNRQLVNILT ALFAFFLETN HFRAAFCKDH DSRSGKQPSQ TLSPSDFLDK 51 100 bmy_18721T0/1-236 ---------S QMEDGWP--- ---------- ---------- --QLTAFTRN ENSP00000218075/1-452 LMGRTSGYDA RIRPNFKGPP VNVTCNIFIN SFGSVTETTM DYRVNIFLRQ ENSBTAP00000022869/1-452 LMGRTSGYDA RIRPNFKGPP VNVTCNIFIN SFGSIAETTM DYRVNIFLRQ BACU018325/1-431 LMGRTSGYDA RIRPNFKGPP VNVTCNIFIN SFGSIAETTM DYRVNIFLRQ ENSTTRP00000000084/1-452 LMGRTSGYDA RIRPNFKGPP VNVTCNIFIN SFGSIAETTM DYRVNIFLRQ 101 150 bmy_18721T0/1-236 GLNILDGEEE ESKSDMLWLE PKTI--VFPL ETWYLCSQNS S---EKIKDY ENSP00000218075/1-452 QWNDSRLAYS EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHDVTTDNK ENSBTAP00000022869/1-452 QWNDSRLAYS EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHDVTTDNK BACU018325/1-431 QWNDSRLAYS EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHDVTTDNK ENSTTRP00000000084/1-452 QWNDSRLAYS EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHDVTTDNK 151 200 bmy_18721T0/1-236 PLQICQNSR- MNATMLTLTL SCPMDLKNFP MDVQTCTMQL ESFGYTMNDL ENSP00000218075/1-452 LLRISKNGKV LYSIRLTLTL SCPMDLKNFP MDVQTCTMQL ESFGYTMNDL ENSBTAP00000022869/1-452 LLRISKNGKV LYSIRLTLTL SCPMDLKNFP MDVQTCTMQL ESFGYTMNDL BACU018325/1-431 LLRISKNGKV LYSIRLTLTL SCPMDLKNFP MDVQTCTMQL ESFGYTMNDL ENSTTRP00000000084/1-452 LLRISKNGKV LYSIRLTLTL SCPMDLKNFP MDVQTCTMQL ESFGYTMNDL 201 250 bmy_18721T0/1-236 IFEWLSDGPV QVAEGLTLPQ FILKEEKELG YCTKHYNTGK FTCIEVKFHL ENSP00000218075/1-452 IFEWLSDGPV QVAEGLTLPQ FILKEEKELG YCTKHYNTGK FTCIEVKFHL ENSBTAP00000022869/1-452 IFEWLSDGPV QVAEGLTLPQ FILKEEKELG YCTKHYNTGK FTCIEVKFHL BACU018325/1-431 IFEWLSDGPV QVAEGLTLPQ FILKEEKELG YCTKHYNTGK FTCIEVKFHL ENSTTRP00000000084/1-452 IFEWLSDGPV QVAEGLTLPQ FILKEEKELG YCTKHYNTGK FTCIEVKFHL 251 300 bmy_18721T0/1-236 ERQMGYYLIQ MYIPSLLIVI LSWVSFWINM DAAPARVALG ITTVLTMTTQ ENSP00000218075/1-452 ERQMGYYLIQ MYIPSLLIVI LSWVSFWINM DAAPARVALG ITTVLTMTTQ ENSBTAP00000022869/1-452 ERQMGYYLIQ MYIPSLLIVI LSWVSFWINM DAAPARVALG ITTVLTMTTQ BACU018325/1-431 ERQMGYYLIQ MYIPSLLIVI LSWVSFWINM DAAPARVALG ITTVLTMTTQ ENSTTRP00000000084/1-452 ERQMGYYLIQ MYIPSLLIVI LSWVSFWINM DAAPARVALG ITTVLTMTTQ 301 350 bmy_18721T0/1-236 SSGSRASLPK ---------- ---------- ---------- ---------- ENSP00000218075/1-452 SSGSRASLPK VSYVKAIDIW MAVCLLFVFA ALLEYAAVNF VSRQHKEFLR ENSBTAP00000022869/1-452 SSGSRASLPK VSYVKAIDIW MAVCLLFVFA ALLEYAAVNF VSRQHKEFLR BACU018325/1-431 SSGSRASLPK VSYVKAIDIW MAVCLLFVFA ALLEYAAVNF VSRQHKEFLR ENSTTRP00000000084/1-452 SSGSRASLPK VSYVKAIDIW MAVCLLFVFA ALLEYAAVNF VSRQHKEFLR 351 400 bmy_18721T0/1-236 ---------- ---------- ---------- ---------- ---------- ENSP00000218075/1-452 LRRRQKRQNK EEDVTRESRF NFSGYGMGHC LQVKDGTAVK ATPANPLPQP ENSBTAP00000022869/1-452 LRRRQKRQNK EEDVTRESRF NFSGYGMGQC LQVKDGTAVK ATPANQLPQP BACU018325/1-431 LRRRQKRQNK EEDVTRESRF NFSGYGMGHC LQVKDGTAVK ATPASQLPQP ENSTTRP00000000084/1-452 LRRRQKRQNK EEDVTRESRF NFSGYGMGHC LQVKDGTAVK ATPASQLPQP 401 450 bmy_18721T0/1-236 ---------- ---------- ---------- ---------- ---------N ENSP00000218075/1-452 PKDGDAIKKK FVDRAKRIDT ISRAAFPLAF LIFNIFYWIT YKIIRHEDVH ENSBTAP00000022869/1-452 PKDADAIKKK FVDRAKRIDT ISRAAFPLAF LIFNIFYWIT YKIIRHEDIH BACU018325/1-431 PKDADAIKKK FVDRAKRIDT ISRAAFPLAF LIFNIFYWIT YKIIRHEDVH ENSTTRP00000000084/1-452 PKDADAIKKK FVDRAKRIDT ISRAAFPLAF LIFNVFYWIT YKIIRHEDVH 451 500 bmy_18721T0/1-236 NK ENSP00000218075/1-452 KK ENSBTAP00000022869/1-452 KK BACU018325/1-431 KK ENSTTRP00000000084/1-452 KK