KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:13 2014 Check: 00 .. Name: bmy_21537T0/1-365 Len: 498 Check: 7824 Weight: 1.00 Name: BACU011198/1-497 Len: 498 Check: 6572 Weight: 1.00 Name: ENSTTRP00000010722/1-377 Len: 498 Check: 3842 Weight: 1.00 Name: ENSP00000361700/1-417 Len: 498 Check: 2389 Weight: 1.00 Name: ENSBTAP00000022870/1-457 Len: 498 Check: 4937 Weight: 1.00 // 1 50 bmy_21537T0/1-365 -------MTT LVPATLSFLL ---------L WTLPGQVLL- ---------- BACU011198/1-497 MMLLTVQERV AAKATVCDLL RAFHEKDFQL WNLPSPASVW NFPGMKGSKE ENSTTRP00000010722/1-377 ---------- ---------- ---------- ---------- ---------- ENSP00000361700/1-417 -------MTT LVPATLSFLL ---------L WTLPGQVLL- ---------- ENSBTAP00000022870/1-457 -------MTT LVPATLSFLL ---------L WTLPGQVLL- ---------- 51 100 bmy_21537T0/1-365 ---------- ---RVALAKE EVKSGTKVSQ PMSPSDFLDK LMGRTSGYDA BACU011198/1-497 RPHTVTLLSG PQTRVALAKE EVKSGTKVSQ PMSPSDFLDK LMGRTSGYDA ENSTTRP00000010722/1-377 ---------- ---------- ---------- -MSPSDFLDK LMGRTSGYDA ENSP00000361700/1-417 ---------- ---RVALAKE EVKSGTKGSQ PMSPSDFLDK LMGRTSGYDA ENSBTAP00000022870/1-457 ---------- ---RVALAKE EVKPGTKASQ PMSPSDFLDK LMGRTSGYDA 101 150 bmy_21537T0/1-365 RIRPNFKGPP VNVTCNIFIN SFSSITETTM DYRVNVFLRQ QWNDPRLAYR BACU011198/1-497 RIRPNFKGPP VNVTCNIFIN SFSSITETTM DYRVNVFLRQ QWNDPRLAYR ENSTTRP00000010722/1-377 RIRPNFKGPP VNVTCNIFIN SFSSITETTM DYRVNVFLRQ QWNDPRLAYR ENSP00000361700/1-417 RIRPNFKGPP VNVTCNIFIN SFSSITKTTM DYRVNVFLRQ QWNDPRLSYR ENSBTAP00000022870/1-457 RIRPNFKGPP VNVTCNIFIN SFGSVTETTM DYRVNVFLRQ QWNDPRLAYR 151 200 bmy_21537T0/1-365 EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHEVTTDNK LLRIFKNGNV BACU011198/1-497 EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHEVTTDNK LLRIFKNGNV ENSTTRP00000010722/1-377 EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHAVTTDNK LLRIFKNGNV ENSP00000361700/1-417 EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHEVTTDNK LLRIFKNGNV ENSBTAP00000022870/1-457 EYPDDSLDLD PSMLDSIWKP DLFFANEKGA NFHEVTTDNK LLRIFKNGNV 201 250 bmy_21537T0/1-365 LYSIS----- ----PLPSLS LSV------- ---GYTMNDL VFEWLEDAPA BACU011198/1-497 LYSIRLTLIL SCPMDLKNFP MDIQTCTMQL ESFGYTMNDL VFEWLEDAPA ENSTTRP00000010722/1-377 LYSIRLTLIL SCPMDLKNFP MDIQTCTMQL ESFGYTMNDL VFEWLEDSPA ENSP00000361700/1-417 LYSIRLTLIL SCLMDLKNFP MDIQTCTMQL ESFGYTMKDL VFEWLEDAPA ENSBTAP00000022870/1-457 LYSIRLTLIL SCPMDLKNFP MDIQTCTMQL ESFGYTMNDL MFEWLEDAPA 251 300 bmy_21537T0/1-365 VQVAEGLTLP QFILRDEKDL GYCTKRYNTG KFTCIVVKFH LERQMGYYLI BACU011198/1-497 VQVAEGLTLP QFVLRDEKDL GYCTKRYNTG KFTCIEVKFH LERQMGYYLI ENSTTRP00000010722/1-377 VQVAEGLTLP QFTLQDEKDL GYCTKRYNTG KFTCIEVKFH LERQMGYYLI ENSP00000361700/1-417 VQVAEGLTLP QFILRDEKDL GCCTKHYNTG KFTCIEVKFH LERQMGYYLI ENSBTAP00000022870/1-457 VQVAEGLTLP QFILRDEKDL GYCTKHYNTG KFTCIEVKFH LERQMGYYLI 301 350 bmy_21537T0/1-365 QMYIPSLLIV ILSWVSFWIN MDAAPARVGL GITTVLTMTT QSSGSRASLP BACU011198/1-497 QMYIPSLLIV ILSWVSFWIN MDAAPARVGL GITTVLTMTT QSSGSRASLP ENSTTRP00000010722/1-377 QMYIPSLLIV ILSWVSFWIN MDAAPARVGL GITTVLTMTT QSSGSRASLP ENSP00000361700/1-417 QMYIPSLLIV ILSWVSFWIN MDAAPARVGL GITTVLTMTT QSSGSRASLP ENSBTAP00000022870/1-457 QMYIPSLLIV ILSWVSFWIN MDAAPARVGL GITTVLTMTT QSSGSRASLP 351 400 bmy_21537T0/1-365 KVKRHARELA CHRAPHFPFI PCSLL----- ---------- ---------- BACU011198/1-497 KVS-YVKAID IWMAVCLLFV FAALLEYAAV NFVSRQHKEF MRLRRRQRRQ ENSTTRP00000010722/1-377 KVS-YVKAID IWMAVCLLFV FAALLEYAAV NFVSRQHKEF MRLRRRQRCQ ENSP00000361700/1-417 KVS-YVKAID IWMAVCLLFV FAALLEYAAI NFVSRQHKEF IRLRRRQRRQ ENSBTAP00000022870/1-457 KVS-YVKAID IWMAVCLLFV FAALLEYAAV NFVSRQHKEF IRLRRRQRRH 401 450 bmy_21537T0/1-365 ---------- LTIFLGFKVG KSHRARAGGL HSLPPEHTAN NIANSVEAGV BACU011198/1-497 RMEEDITRES RLYFHGYGLG HCLQARDGGP MEGSGIYSPQ PPAPLLREGE ENSTTRP00000010722/1-377 RMEEDITRES RLYFRGYGLG HCLQARDGGP VEGSGIYSPQ PPAPLLREGE ENSP00000361700/1-417 RLEEDIIQES RFYFRGYGLG HCLQARDGGP MEGSGIYSPQ PPAPLLREGE ENSBTAP00000022870/1-457 RMEEDIIRES RFYFRGYGLG HCLQARDGGP MEGSGIYSPQ PPAPLLREGE 451 500 bmy_21537T0/1-365 ADAVWLGNE- ---------- ---------- ---------- -------- BACU011198/1-497 NMRKLYVDQA KRIDTISRVV FPFTFLIFNI FYWVVYKVLW SEDIHQAL ENSTTRP00000010722/1-377 NMRKLYVDQ- ---------- ---------- ---------- -------- ENSP00000361700/1-417 TTRKLYVD-- ---------- ---------- ---------- -------- ENSBTAP00000022870/1-457 TMRKLYVDQA KRIDTISRAV FPFTFLIFNI FYWVVYKVLR SEDIHQAL