KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:15 2014 Check: 00 .. Name: ENSP00000328340/1-432 Len: 435 Check: 5806 Weight: 1.00 Name: BACU013932/1-150 Len: 435 Check: 2141 Weight: 1.00 Name: ENSBTAP00000022890/1-424 Len: 435 Check: 9479 Weight: 1.00 Name: ENSTTRP00000015570/1-235 Len: 435 Check: 2935 Weight: 1.00 Name: bmy_08847T0/1-265 Len: 435 Check: 1177 Weight: 1.00 // 1 50 ENSP00000328340/1-432 MAGLGLGSAV PVWLAEDDLG CIICQGLLDW PATLPCGHSF CRHCLEALWG BACU013932/1-150 ---------- ---------- ---------- ---------- -----MGLWG ENSBTAP00000022890/1-424 MAGLDAGRAI PVWLAEDDLG CIICHDLLAW PATLPCGHTF CRDCLLDLWA ENSTTRP00000015570/1-235 RAGLDACPAV PM-LTEDDLG CIICHELLAR PATLSCGHSF CHNCLMGLWG bmy_08847T0/1-265 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000328340/1-432 ARDARRWACP TCRQGAAQQP HLRKNTLLQD LADKYRRAAR EIQ---AGSD BACU013932/1-150 AG--RHGSCR TCREGAERPL QRRKNTMPQD LEDKYSREAR ELE------- ENSBTAP00000022890/1-424 AR--RSRFCP SCREGAPGPP QLRKNTMLED LADKYRLAAR ELEPLSPGPE ENSTTRP00000015570/1-235 AG--RHGSCP TCREGAERPL QLRKNTMVQD LEDKNSREAR ELE------- bmy_08847T0/1-265 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000328340/1-432 PAHCPCPGSS SLSSAAARPR RRPELQRVAV EKSITEVAQE LTELVEHLVD BACU013932/1-150 ---GPSP--- -----APGPS GRTAQLP--- ---------- ---------- ENSBTAP00000022890/1-424 PTPAPRP--- -----ASRPG RPTAQLRVEA PKSSTEVDRE LAKLVERLID ENSTTRP00000015570/1-235 ---GPNP--- -------PPP RRTAQLPAVA QKSITEVGWG LAELVERLID bmy_08847T0/1-265 ---------- ---------- -------VVA QKSITEVGWE LAELVERLID 151 200 ENSP00000328340/1-432 IVRSLQNQRP LSESGPDNEL SILGKAFSSG VDLSMASPKL VTSDTAAGKI BACU013932/1-150 ---------- ---------- -----ALSDG VDLSLASPKL VTSNTPEGKM ENSBTAP00000022890/1-424 IVRKLQSPRH LLESEPDKEV SVLAMTLLDG VDLSLASPK- VSSSPPEQKM ENSTTRP00000015570/1-235 TLRSLQGQRH LPESEPDNEM SILAVSPSPG VDFSLASPKL VTSNTPEGKM bmy_08847T0/1-265 IVRSLQSQRH LPESEPDNEM SILAVALSDG VDLSLASPKL VTSNTPEGKM 201 250 ENSP00000328340/1-432 RDILHDLEEI QEKLQESVTW KEAPEAQMQG ELLEAPSSSS CPLPDQSHPA BACU013932/1-150 RDILHDLEEI QEKLQENFMR KEALEEQMQA GLPTSPGVFH CP-------- ENSBTAP00000022890/1-424 KDILHDLEEI QEKLRENFTQ KGALEEQTQV ELPEVPSSSS CPLPDQSRFA ENSTTRP00000015570/1-235 RD-LHDLEEI QEKLQENFMW KEALEEQMQX XXXXXXXXXX X--------- bmy_08847T0/1-265 RDILHDLEEI QEKLQENFTW KEALEEQMQ- GLLLFPGSG- --LKNSSHLP 251 300 ENSP00000328340/1-432 LRRASRFAQW AIHPTFNLKS LSCSLEVSKD SRTVTVSHRP QPYRWSCERF BACU013932/1-150 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022890/1-424 PKKASSFARW AISPTFDLES LSCNLKVSVD LRTVTVSDFP MLYAWSPERF ENSTTRP00000015570/1-235 ---------- ---------- ---------- ---------- ---------- bmy_08847T0/1-265 LRQV------ ---------- ---------- ---------- ---LWSRLPL 301 350 ENSP00000328340/1-432 STSQVLCSQA LSSGKHYWEV DTRNCSHWAV GVASWEMSRD QVLGRTMDSC BACU013932/1-150 ---------- ---------- ETQREAVLQV ---------- ---------- ENSBTAP00000022890/1-424 ASSQALCSQA LSSGQHYWEV DTQRCSHWAV GVASRGMKRD QILGRTTDSW ENSTTRP00000015570/1-235 ---------- ---------- -------XXX XXXHLAPKRA SSFAR----- bmy_08847T0/1-265 PPDSATASFA LSSGQQYWEV DTQHCSHWAV GVASRGMRRD QTLGRTRNSW 351 400 ENSP00000328340/1-432 CVEWKGTSQL SAWHMVKETV LGSDRPGVVG IWLNLEEGKL AFYSVDNQEK BACU013932/1-150 ---------- ---------- -----PSLIG V----KDGSA ---------- ENSBTAP00000022890/1-424 CVEWKGASQL SAWCMVKETV LGSDRPSVVG IWLDLEEGKL AFYSKADQAK ENSTTRP00000015570/1-235 ---------- ---------- ---------- ---------- ---------- bmy_08847T0/1-265 CVEWKGTSQL SAWHMVKETV LGSNRPSVVG IWLDLEEGKL AFYSMADQVK 401 450 ENSP00000328340/1-432 LLYECTISAS SPLYPAFWLY GLHPGNYLII KQVKV BACU013932/1-150 ---------- ---------- ---------- ----- ENSBTAP00000022890/1-424 PLFECPISVS VPLHPAFWLY GLDPGNSLTI RKMNV ENSTTRP00000015570/1-235 ---------- ---------- ---------- ----- bmy_08847T0/1-265 LLYECPVSAA FPLHPAFWLY GLFPGNSLTM RQINV