KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:19 2014 Check: 00 .. Name: bmy_18655T0/1-934 Len: 1002 Check: 6627 Weight: 1.00 Name: ENSTTRP00000008090/1-928 Len: 1002 Check: 7369 Weight: 1.00 Name: BACU007855/1-956 Len: 1002 Check: 7930 Weight: 1.00 Name: ENSP00000366233/1-961 Len: 1002 Check: 9725 Weight: 1.00 Name: ENSBTAP00000022907/1-961 Len: 1002 Check: 9261 Weight: 1.00 // 1 50 bmy_18655T0/1-934 ---------- ---------- MSRGPARPNA GCQIIHPPWE GGIRYRGLTR ENSTTRP00000008090/1-928 ---------- ---------- ---------- -CQIIHPPWE GGIRYRGLTR BACU007855/1-956 MLLLLLLPLA PLFLRPPGAG GAQTPNATSE GCQIIHPPWE GGIRYRGLTR ENSP00000366233/1-961 --MLLLLLLA PLFLRPPGAG GAQTPNATSE GCQIIHPPWE GGIRYRGLTR ENSBTAP00000022907/1-961 --MLLLLLLA PLFLRPPGAG GAQTPNATSE GCQIIHPPWE GGIRYRGLTR 51 100 bmy_18655T0/1-934 DQVKAINFLP VDYEIEYVCR GEREVVGPKV RKCLANGSWT DMDTPSRCVR ENSTTRP00000008090/1-928 DQVKAINFLP VDYEIEYVCR GEREVVGPKV RKCLANGSWT DMDTPSRCVR BACU007855/1-956 EQVKAINFLP VDYEIEYVCR GEREVVGPKV RKCLANGSWT DMDTPSRCVR ENSP00000366233/1-961 DQVKAINFLP VDYEIEYVCR GEREVVGPKV RKCLANGSWT DMDTPSRCVR ENSBTAP00000022907/1-961 DQVKAINFLP VDYEIEYVCR GEREVVGPKV RKCLANGSWT DMDTPSRCVR 101 150 bmy_18655T0/1-934 ICSKSYLTLE NGKVFLTGGD LPALDGARVD FRCDSDFHLV GSSRSICSQG ENSTTRP00000008090/1-928 ICSKSYLTLE NGKVFLTGGD LPALDGARVD FRCDSDFHLV GSSRSICSQG BACU007855/1-956 ICSKSYLTLE NGKVFLTGGD LPALDGARVD FRCDSDFHLV GSSRSICSQG ENSP00000366233/1-961 ICSKSYLTLE NGKVFLTGGD LPALDGARVD FRCDPDFHLV GSSRSICSQG ENSBTAP00000022907/1-961 ICSKSYLTLE NGKVFLTGGD LPALDGARVD FRCDPDFHLV GSSRSICSQG 151 200 bmy_18655T0/1-934 QWSTPKPHCQ GTLPSETQAS APPPPPRSSS AWTVNRTPHS ERRAVYIGAL ENSTTRP00000008090/1-928 QWSTPKPHCQ ---------- ---------- ---VR--PHS ERRAVYIGAL BACU007855/1-956 QWSTPKPHCQ ---------- ---------- ---------- ERRAVYIGAL ENSP00000366233/1-961 QWSTPKPHCQ ---------- ---------- ---VNRTPHS ERRAVYIGAL ENSBTAP00000022907/1-961 QWSIPKPHCQ ---------- ---------- ---VNRTPHS ERRAVYIGAL 201 250 bmy_18655T0/1-934 FPMSGGWPGG QACQPAVEMA LEDVNSRRDI LPDYELKLIH HDSKCDPGQA ENSTTRP00000008090/1-928 FPMSGGWPGG QACQPAVEMA LEDVNSRRDI LPDYELKLIH HDSKCDPGQA BACU007855/1-956 FPMSGGWPGG QACQPAVEMA LEDVNSRRDI LPDYELKLIH HDSKCDPGQA ENSP00000366233/1-961 FPMSGGWPGG QACQPAVEMA LEDVNSRRDI LPDYELKLIH HDSKCDPGQA ENSBTAP00000022907/1-961 FPMSGGWPGG QACQPAVEMA LEDVNSRRDI LPDYELKLIH HDSKCDPGQA 251 300 bmy_18655T0/1-934 TKYLYELLYN DPIKIILMPG CSSVSTLVAE AARMWNLIVL SYGSSSPALS ENSTTRP00000008090/1-928 TKYLYELLYN DPIKIILMPG CSSVSTLVAE AARMWNLIVL SYGSSSPALS BACU007855/1-956 TKYLYELLYN DPIKIILMPG CSSVSTLVAE AARMWNLIVL SYGSSSPALS ENSP00000366233/1-961 TKYLYELLYN DPIKIILMPG CSSVSTLVAE AARMWNLIVL SYGSSSPALS ENSBTAP00000022907/1-961 TKYLYELLYN DPIKIILMPG CSSVSTLVAE AARMWNLIVL SYGSSSPALS 301 350 bmy_18655T0/1-934 NRQRFPTFFR THPSATLHNP TRVKLFEKWG WKKIATIQQT TEVFTSTLDD ENSTTRP00000008090/1-928 NRQRFPTFFR THPSATLHNP TRVKLFEKWG WKKIATIQQT TEVFTSTLDD BACU007855/1-956 NRQRFPTFFR THPSATLHNP TRVKLFEKWG WKKIATIQQT TEVFTSTLDD ENSP00000366233/1-961 NRQRFPTFFR THPSATLHNP TRVKLFEKWG WKKIATIQQT TEVFTSTLDD ENSBTAP00000022907/1-961 NRQRFPTFFR THPSATLHNP TRVKLFEKWG WKKIATIQQT TEVFTSTLDD 351 400 bmy_18655T0/1-934 LEERVKEAGI EITFRQSFFS DPAVPVKNLK RQDARIIVGL FYETEARKVF ENSTTRP00000008090/1-928 LEERVKEAGI EITFRQSFFS DPAVPVKNLK RQDARIIVGL FYETEARKVF BACU007855/1-956 LEERVKEAGI EITFRQSFFS DPAVPVKNLK RQDARIIVGL FYETEARKVF ENSP00000366233/1-961 LEERVKEAGI EITFRQSFFS DPAVPVKNLK RQDARIIVGL FYETEARKVF ENSBTAP00000022907/1-961 LEERVKEAGI EITFRQSFFS DPAVPVKNLK RQDARIIVGL FYETEARKVF 401 450 bmy_18655T0/1-934 CEVELESEDG GALGGLFAVY KERLFGKKYV WFLIGWYADN WFKIYDPSIN ENSTTRP00000008090/1-928 CE-------- --------VY KERLFGKKYV WFLIGWYADN WFKIYDPSIN BACU007855/1-956 CE-------- --------VY KERLFGKKYV WFLIGWYADN WFKIYDPSIN ENSP00000366233/1-961 CE-------- --------VY KERLFGKKYV WFLIGWYADN WFKIYDPSIN ENSBTAP00000022907/1-961 CE-------- --------VY KERLFGKKYV WFLIGWYADN WFKIYDPSIN 451 500 bmy_18655T0/1-934 CTVDEMTEAV EGHITTEIVM LNPANTRSIS NMTSQEFVEK LTKRLKRHPE ENSTTRP00000008090/1-928 CTVDEMTEAV EGHITTEIVM LNPANTRSIS NMTSQEFVEK LTKRLKRHPE BACU007855/1-956 CTVDEMTEAV EGHITTEIVM LNPANTRSIS NMTSQEFVEK LTKRLKRHPE ENSP00000366233/1-961 CTVDEMTEAV EGHITTEIVM LNPANTRSIS NMTSQEFVEK LTKRLKRHPE ENSBTAP00000022907/1-961 CTVDEMTEAV EGHITTEIVM LNPANTRSIS NMTSQEFVEK LTKRLKRHPE 501 550 bmy_18655T0/1-934 ETGGFQEAPL AYDAIWALAL ALNKTSGGGG RSGVRLEDFN YNNQTITDQI ENSTTRP00000008090/1-928 ETGGFQEAPL AYDAIWALAL ALNKTSGGGG RSGVRLEDFN YNNQTITDQI BACU007855/1-956 ETGGFQEAPL AYDAIWALAL ALNKTSGGGG RSGVRLEDFN YNNQTITDQI ENSP00000366233/1-961 ETGGFQEAPL AYDAIWALAL ALNKTSGGGG RSGVRLEDFN YNNQTITDQI ENSBTAP00000022907/1-961 ETGGFQEAPL AYDAIWALAL ALNKTSGGGG RSGVRLEDFN YNNQTITDQI 551 600 bmy_18655T0/1-934 YRAMNSSSFE GVSGHVVFDA SGSRMAWTLI EQLQGGSYKK IGYYDSTKDD ENSTTRP00000008090/1-928 YRAMNSSSFE GVSGHVVFDA SGSRMAWTLI EQLQGGSYKK IGYYDSTKDD BACU007855/1-956 YRAMNSSSFE GVSGHVVFDA SGSRMAWTLI EQLQGGSYKK IGYYDSTKDD ENSP00000366233/1-961 YRAMNSSSFE GVSGHVVFDA SGSRMAWTLI EQLQGGSYKK IGYYDSTKDD ENSBTAP00000022907/1-961 YRAMNSSSFE GVSGHVVFDA SGSRMAWTLI EQLQGGSYKK IGYYDSTKDD 601 650 bmy_18655T0/1-934 LSWSKTDKWI GGSPPADQTL VIKTFRFLSQ KLFISVSVLS SLGIVLAVVC ENSTTRP00000008090/1-928 LSWSKTDKWI GGSPPADQTL VIKTFRFLSQ KLFISVSVLS SLGIVLAVVC BACU007855/1-956 LSWSKTDKWI GGSPPADQTL VIKTFRFLSQ KLFISVSVLS SLGIVLAVVC ENSP00000366233/1-961 LSWSKTDKWI GGSPPADQTL VIKTFRFLSQ KLFISVSVLS SLGIVLAVVC ENSBTAP00000022907/1-961 LSWSKTDKWI GGSPPADQTL VIKTFRFLSQ KLFISVSVLS SLGIVLAVVC 651 700 bmy_18655T0/1-934 LSFNIYNSHV RYIQNSQPNL NNLTAVGCSL ALAAVFPLGL DGYHIGRSQF ENSTTRP00000008090/1-928 LSFNIYNSHV RYIQNSQPNL NNLTAVGCSL ALAAVFPLGL DGYHIGRSQF BACU007855/1-956 LSFNIYNSHV RYIQNSQPNL NNLTAVGCSL ALAAVFPLGL DGYHIGRSQF ENSP00000366233/1-961 LSFNIYNSHV RYIQNSQPNL NNLTAVGCSL ALAAVFPLGL DGYHIGRNQF ENSBTAP00000022907/1-961 LSFNIYNSHV RYIQNSQPNL NNLTAVGCSL ALAAVFPLGL DGYHIGRSQF 701 750 bmy_18655T0/1-934 PFVCQARLWL LGLGFSLGYG SMFTKIWWVH TVFTKKEEKK EWRKTLEPWK ENSTTRP00000008090/1-928 PFVCQARLWL LGLGFSLGYG SMFTKIWWVH TVFTKKEEKK EWRKTLEPWK BACU007855/1-956 PFVCQARLWL LGLGFSLGYG SMFTKIWWVH TVFTKKEEKK EWRKTLEPWK ENSP00000366233/1-961 PFVCQARLWL LGLGFSLGYG SMFTKIWWVH TVFTKKEEKK EWRKTLEPWK ENSBTAP00000022907/1-961 PFVCQARLWL LGLGFSLGYG SMFTKIWWVH TVFTKKEEKK EWRKTLEPWK 751 800 bmy_18655T0/1-934 LYATVGLLVG MDVVTLAIWQ IVDPLHRTIE TFAKEEPKED IDVSILPQLE ENSTTRP00000008090/1-928 LYATVGLLVG MDVLTLAIWQ IVDPLHRTIE TFAKEEPKED IDVSILPQLE BACU007855/1-956 LYATVGLLVG MDVLTLAIWQ IVDPLHRTIE TFAKEEPKED IDVSILPQLE ENSP00000366233/1-961 LYATVGLLVG MDVLTLAIWQ IVDPLHRTIE TFAKEEPKED IDVSILPQLE ENSBTAP00000022907/1-961 LYATVGLLVG MDVLTLAIWQ IVDPLHRTIE TFAKEEPKED IDVSILPQLE 801 850 bmy_18655T0/1-934 HCSSKKMNTW LGIFYGYKGL LLLLGIFLAY ETKSVSTEKI NDHRAVGMAI ENSTTRP00000008090/1-928 HCSSKKMNTW LGIFYGYKGL LLLLGIFLAY ETKSVSTEKI NDHRAVGMAI BACU007855/1-956 HCSSKKMNTW LGIFYGYKGL LLLLGIFLAY ETKSVSTEKI NDHRAVGMAI ENSP00000366233/1-961 HCSSRKMNTW LGIFYGYKGL LLLLGIFLAY ETKSVSTEKI NDHRAVGMAI ENSBTAP00000022907/1-961 HCSSKKMNTW LGIFYGYKGL LLLLGIFLAY ETKSVSTEKI NDHRAVGMAI 851 900 bmy_18655T0/1-934 YNVAVLCLIT APVTMILSSQ QDAAFAFASL AIVFSSYITL VVLFVP---- ENSTTRP00000008090/1-928 YNVAVLCLIT APVTMILSSQ QDAAFAFASL AIVFSSYIP- DVLFVP-MRR BACU007855/1-956 YNVAVLCLIT APVTMILSSQ QDAAFAFASL AIVFSSYITL VVLFVPKMRR ENSP00000366233/1-961 YNVAVLCLIT APVTMILSSQ QDAAFAFASL AIVFSSYITL VVLFVPKMRR ENSBTAP00000022907/1-961 YNVAVLCLIT APVTMILSSQ QDAAFAFASL AIVFSSYITL VVLFVPKMRR 901 950 bmy_18655T0/1-934 ---------- ---------- ---------- ---------- ----KKEERV ENSTTRP00000008090/1-928 LITRGEWQSE AQDTMKTGSS TNNNEEEKSR LLEKENRELE KIIAEKEERV BACU007855/1-956 LITRGEWQSE AQDTMKTGSS TNNNEEEKSR LLEKENRELE KIIAEKEERV ENSP00000366233/1-961 LITRGEWQSE AQDTMKTGSS TNNNEEEKSR LLEKENRELE KIIAEKEERV ENSBTAP00000022907/1-961 LITRGEWQSE AQDTMKTGSS TNNNEEEKSR LLEKENRELE KIIAEKEERV 951 1000 bmy_18655T0/1-934 SELRHQLQSR QQLRSRRHPP TPPDPSGALP RGPPEPPDRL SCDGSRVHLL ENSTTRP00000008090/1-928 SELRHQLQSR QQLRSRRHPP TPPDPSGALP RGPPEPPDRL SCDGSRVHLL BACU007855/1-956 SELRHQLQSR QQLRSRRHPP TPPDPSGALP RGPPEPPDRL SCDGSRVHLL ENSP00000366233/1-961 SELRHQLQSR QQLRSRRHPP TPPEPSGGLP RGPPEPPDRL SCDGSRVHLL ENSBTAP00000022907/1-961 SELRHQLQSR QQLRSRRHPP TPPDPSGGLP RGPPEPPDRL SCDGSRVHLL 1001 1050 bmy_18655T0/1-934 YK ENSTTRP00000008090/1-928 YK BACU007855/1-956 YK ENSP00000366233/1-961 YK ENSBTAP00000022907/1-961 YK