KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:21 2014 Check: 00 .. Name: ENSP00000320076/1-461 Len: 520 Check: 2352 Weight: 1.00 Name: ENSBTAP00000022930/1-462 Len: 520 Check: 9405 Weight: 1.00 Name: ENSTTRP00000002450/1-519 Len: 520 Check: 9186 Weight: 1.00 Name: bmy_15321T0/1-460 Len: 520 Check: 341 Weight: 1.00 Name: BACU011499/1-461 Len: 520 Check: 496 Weight: 1.00 // 1 50 ENSP00000320076/1-461 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000022930/1-462 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002450/1-519 RRLWRSASSV CGGGRWRPRP RPLPDPLPQP HASALTPPPS PAGGISPCPL bmy_15321T0/1-460 ---------- ---------- ---------- ---------- ---------- BACU011499/1-461 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000320076/1-461 --------MN DQYHRAARDG YLELLKEATR KELNAPDEDG MTPTLWAAYH ENSBTAP00000022930/1-462 --------MN DQYHRAARDG YLELLKEATR KELNAPDEDG MTPTLWAAYH ENSTTRP00000002450/1-519 PVPSKSGAMN DQYHRAARDG YLELLKEATR KELNAPDEDG MTPTLWAAYH bmy_15321T0/1-460 --------MN DQYHRAARDG YLELLKEATR KELNAPDEDG MTPTLWAAYH BACU011499/1-461 --------MN DQYHRAARDG YLELLKEATR KELNAPDEDG MTPTLWAAYH 101 150 ENSP00000320076/1-461 GNLESLRLIV SRGGDPDKCD IWGNTPLHLA ASNGHLHCLS FLVSFGANIW ENSBTAP00000022930/1-462 GNLESLRLIV SRGGDPDKCD IWGNTPLHLA AANGHLHCLS FLVSFGANIW ENSTTRP00000002450/1-519 GNLESLRLIV SRGGDPDKCD IWGNTPLHLA ASNGHLHCLS FLVSFGANIW bmy_15321T0/1-460 GNLESLRLIV SRGGDPDKCD IWGNTPLHLA ASNGHLHCLS FLVSFGANIW BACU011499/1-461 GNLESLRLIV SRGGDPDKCD IWGNTPLHLA ASNGHLHCLS FLVSFGANIW 151 200 ENSP00000320076/1-461 CLDNDYHTPL DMAAMKGHME CVRYLDSIAA KQSSLNPKLV GKLKDKAFRE ENSBTAP00000022930/1-462 CLDNDYHTPL DMAAMKGHME CVRYLDSIAA KQSSLSPKLV GKLKDKAFRE ENSTTRP00000002450/1-519 CLDNDYHTPL DMAAMKGHME CVRYLDSIAA KQSSLNPKLV GKLKDKAFRE bmy_15321T0/1-460 CLDNDLHTPL DMAAMKGHLE CVRYLDSIAA KQSSLNPKLV GKLKDKAFRE BACU011499/1-461 CLDNDLHTPL DMAAMKGHLE CVRYLDSIAA KQSSLNPKLV GKLKDKAFRE 201 250 ENSP00000320076/1-461 AERRIRECAK LQRRHHERME RRYRRELAER SDTLSFSSLT SSTLSRRLQH ENSBTAP00000022930/1-462 AERRIRECAK LQRKHHERME RRFRRELAER ADSLSFSSLT SSTLSGRLQH ENSTTRP00000002450/1-519 AERRIRECAK MQRKHHERME RRYRRELAER SDTLSFSSIT SSTLSRRLHH bmy_15321T0/1-460 AERRIRECAK MQRKHHERME RRYRRELAER SDALSFSSLT SSTLSRRLQH BACU011499/1-461 AERRIRECAK MQRKHHERME RRYRRELAER SDALSFSSLT PSTLSRRLQH 251 300 ENSP00000320076/1-461 LALGSHLPYS QATLHGTAR- GKTKMQKKLE RRKQGGEGTF KVSEDGRKSA ENSBTAP00000022930/1-462 LALAGHLPYS QATLHGTAKA GKTKIQRKLE RRKQGGEGTF KISEDGRKSV ENSTTRP00000002450/1-519 LALGSHLPYS QATLHGTAK- GKTKIQKKLE RRKQGGEGTF KISEDGRKSV bmy_15321T0/1-460 LALGSHLPYS QATLHGTAK- GKTKIQKKLE RRKQGGEGTF KISEDGRKSV BACU011499/1-461 LALGSHLPYS QATLHGTAK- GKTKIQKKLE RRKQGGEGTF KISEDGRKSV 301 350 ENSP00000320076/1-461 RSLSGLQLGS DVMFVRQGTY ANPKEWGRAP LRDMFLSDED SVSRATLAAE ENSBTAP00000022930/1-462 RSLSGLQLGS DVMFVRQGTY ANPKEWGRAP LRDMFLSDED SVSHATLAAE ENSTTRP00000002450/1-519 RSLSGLQLGS DVMFVRQGTY ANPKEWGRAP LRDMFLSDED SVSRATLAAE bmy_15321T0/1-460 RSLSGLQLGS DVMFVRQGTY ANPKEWGRAP LRDMFLSDED SVSRATLAAE BACU011499/1-461 RSLSGLQLGS DVMFVRQGTY ANPKEWGRAP LRDMFLSDED SVSRATLAAE 351 400 ENSP00000320076/1-461 PAHSEVSTDS GHDSLFTRPG LGTMVFRRNY LSSGLHGLGR EDGGLDGVGA ENSBTAP00000022930/1-462 PAHSEVSTDS GHDSLFTRPG LGTMVFRRNY LSSGLHGLGR EDAALDGAGP ENSTTRP00000002450/1-519 PARSEVSTDS GHDSLFTRPG LGTMVFRRNY LSSGLHGLGR EDAALDGAGT bmy_15321T0/1-460 PARSEVSTDS GHDSLFTRPG LGTMVFRRNY LSSGLHGLGR EDAALDGAGT BACU011499/1-461 PARSEASTDS GHDSLFTRPG LGTMVFRRNY LSSGLHGLGR EDAALDGAGT 401 450 ENSP00000320076/1-461 PRGRLQSSPS LDDDSLGSAN SLQDRSCGEE LPWDELDLGL DEDLEPETSP ENSBTAP00000022930/1-462 PRGRLQSSTS LDDDSLGSAN SLQDRSCGEE LPWDELDLGL DEDLEPETSP ENSTTRP00000002450/1-519 PRGRLQSSPS LDDDSLGSAN SLQDRSCGEE LPWDELDLGL DEDLEPETSP bmy_15321T0/1-460 PRGRLQSSPS LDDDSLGSAN SLQDRSCGEE LPWDELDLGL DEDLEPETSP BACU011499/1-461 PRGRLRSSPS LDDDSLGSAN SLQDRSCGEE LPWDELDLGL DEDLEPETSP 451 500 ENSP00000320076/1-461 LETFLASLHM EDFAALLRQE KIDLEALMLC SDLDLRSISV PLGPRKKILG ENSBTAP00000022930/1-462 LETFLASLHM EDFTSLLRQE KIDLEALMLC SDLDLRSISV PLGPRKKILG ENSTTRP00000002450/1-519 LETFLASLHM EAFTTILRQE KIDLEALMLC SDLDLRSINV PLGPRKKIMG bmy_15321T0/1-460 LETFLASLHM EDFTSILRQE KIDLEALMLC SDLDLRSISV PLGPRKKIMG BACU011499/1-461 LETFLASLHM EDFTSILRQE KIDLEALMLC SDLDLRSISV PLGPRKKIMG 501 550 ENSP00000320076/1-461 AVRRRRQAME RPPALEDTEL ENSBTAP00000022930/1-462 AVRRRRQALE RPPALEDTEL ENSTTRP00000002450/1-519 AVRRRRQALE RPPALEDTEL bmy_15321T0/1-460 AVRRRRQALE RPPALEDTD- BACU011499/1-461 AVRRRRQALE RPPALEDTEL