KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:22 2014 Check: 00 .. Name: ENSBTAP00000022932/1-373 Len: 388 Check: 7784 Weight: 1.00 Name: ENSP00000263702/1-373 Len: 388 Check: 7202 Weight: 1.00 Name: bmy_08027T0/1-294 Len: 388 Check: 5231 Weight: 1.00 Name: BACU003274/1-387 Len: 388 Check: 4717 Weight: 1.00 Name: ENSTTRP00000002414/1-369 Len: 388 Check: 7557 Weight: 1.00 // 1 50 ENSBTAP00000022932/1-373 ---------- -----MWVCG ALCRTRAPAQ LGQRLLPESR RRRPASASFS ENSP00000263702/1-373 ---------- -----MWVCS TLWRVRTPAR QWRGLLPASG CHGPAASSYS bmy_08027T0/1-294 ---------- ------MVS- ---------- ---------- ----LTTQFE BACU003274/1-387 MTYLTASGSE LTGGSMWVCG AL-GARTPAQ LRRRLFPASR RRRPAAAAFS ENSTTRP00000002414/1-369 ---------- -----MWVCG A----RTPAQ LRRRLFPAFR RRRPAAAAFS 51 100 ENSBTAP00000022932/1-373 ASAEPSRVRA LVYGHHGDPA KVVELKNLEL AAVGGSDVHV KMLAAPINPS ENSP00000263702/1-373 ASAEPARVRA LVYGHHGDPA KVVELKNLEL AAVRGSDVRV KMLAAPINPS bmy_08027T0/1-294 LSAGTA---- -VSGIDGIP- ---------- --------WV RL-------- BACU003274/1-387 ASAERSRVRA LVYEHHGDPA KVVELKNLEL AAVGRSDVHV KMLAAPVNPS ENSTTRP00000002414/1-369 ASAEPSRVRA LVYGHHGDPA KVVELKNLEL AAVGGSDVHV KMLAAPVNPS 101 150 ENSBTAP00000022932/1-373 DINMIQGNYG LLPQLPAVGG NEGVGQVVAV GSGVTGVKPG DWVIPANPGL ENSP00000263702/1-373 DINMIQGNYG FLPELPAVGG NEGVAQVVAV GSNVTGLKPG DWVIPANAGL bmy_08027T0/1-294 ---------G L--------- ---VSLVVAV GSSVTGVKPG DWVIPANPGL BACU003274/1-387 DINMIQGNYG LLPKLPAVGG NEGVGQVVAV GSSVTRVKPG DWVIPANAGL ENSTTRP00000002414/1-369 DINMIQGNYG LLPRLPAVGG NEGVGQVVAV GSSVTRVKPG DWVIPANAGL 151 200 ENSBTAP00000022932/1-373 GTWRTEAVFG EEELITVPSD IPLQSAATLG VNPCTAYRML VDFERLRPGD ENSP00000263702/1-373 GTWRTEAVFS EEALIQVPSD IPLQSAATLG VNPCTAYRML MDFEQLQPGD bmy_08027T0/1-294 GTWRTEAVFS EEALISVPSD IPLQSAATLG VNPCTAYRML MDFERLRPGD BACU003274/1-387 GTWRTEAVFS EEALISVPSD IPLQSAATLG VNPCTAYRML MDFERLRPGD ENSTTRP00000002414/1-369 GTWRTEAVFS EEALISVPSD IPLQSAATLG VNPCTAYRML MDFEQLRPGD 201 250 ENSBTAP00000022932/1-373 SIIQNASNSG VGQAVIQIAA ARGLRTINVL RDRPDLQKLT DRLKNLGANH ENSP00000263702/1-373 SVIQNASNSG VGQAVIQIAA ALGLRTINVV RDRPDIQKLS DRLKSLGAEH bmy_08027T0/1-294 SVIQNASNSG VGQAVIQIAA ALGLRTINVV RDRPDIQKLT DRLKNLGAHH BACU003274/1-387 SVIQNASNSG VGQAVIQIAA ALGLRTINVV RDRPDIQKLT DRLKNLGAHH ENSTTRP00000002414/1-369 SVIQNASNSG VGQAVIQIAA ALGLRTINVV RDRPDIQKLT DRLKNLGAHH 251 300 ENSBTAP00000022932/1-373 VVTEEELRKP EMKSFFKDVP QPRLALNCVG GKSSTELLRH LAPGGPPSAS ENSP00000263702/1-373 VITEEELRRP EMKNFFKDMP QPRLALNCVG GKSSTELLRQ LARGGTMVTY bmy_08027T0/1-294 VVTEEELRKH EMKNFFKDVP QPQLALNCVG GKSSTELLRH LAPGGTMVTY BACU003274/1-387 VVTEEELRKH EMKNFFKDVP QPQLALNCVG GKSSTELLRH LAPGGTMVTY ENSTTRP00000002414/1-369 VVTEEELRKH EMKNFFKDVP QPQLALNCVG GKSSTELLRH LAPGGTMVTY 301 350 ENSBTAP00000022932/1-373 GQCKPRPVVT SVSQLIFKDL KLRGFWLSQW KKDHSPDQFK ELILTLCDLI ENSP00000263702/1-373 GGMAKQPVVA SVSLLIFKDL KLRGFWLSQW KKDHSPDQFK ELILTLCDLI bmy_08027T0/1-294 GGMAKQPVIA SVSLLIFKDL KLRGFWLSQW KKDHSPDQFK ELILTLCDLI BACU003274/1-387 GGMAKQPVIA SVSLLIFKDL KLRGFWLSQW KKDHSPDQFK ELILTLCDLI ENSTTRP00000002414/1-369 GGMAKQPVIA SVSLLIFKDL KLRGFWLSQW KKDHSPDQFK ELILTLCDLI 351 400 ENSBTAP00000022932/1-373 RRGQLTAPAC SEVPLQDYLC ALEASTQPFV SSKQILTM ENSP00000263702/1-373 RRGQLTAPAC SQVPLQDYQS ALEASMKPFI SSKQILTM bmy_08027T0/1-294 HRGQLTAPAC SEAPLQDYQR ALEASMQPFV SSKQILTM BACU003274/1-387 HRGQLTAPAC SEAPLQDYQR ALEASMQPFV SSKQILIM ENSTTRP00000002414/1-369 HRGQLTAPAC SEVPLQDYQR ALEASMQPFV SSKQILTM