KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:24 2014 Check: 00 .. Name: ENSP00000358490/1-351 Len: 352 Check: 2090 Weight: 1.00 Name: ENSBTAP00000022936/1-338 Len: 352 Check: 6068 Weight: 1.00 Name: bmy_10613T0/1-295 Len: 352 Check: 1936 Weight: 1.00 Name: ENSTTRP00000002236/1-344 Len: 352 Check: 4725 Weight: 1.00 Name: BACU002673/1-340 Len: 352 Check: 2215 Weight: 1.00 // 1 50 ENSP00000358490/1-351 MSFPCKFVAS FLLIFNVSSK GAVSKEITNA LETWGALGQD INLDIPSFQM ENSBTAP00000022936/1-338 MNLACEILAS FLLIFTVPTK GEDPE----S IVVWGALDHD LNLDIPGFPR bmy_10613T0/1-295 MSLTCKILAS FLLIFAVSTK GEVSE---NT KVIWGRLDHD INLDIPDFQM ENSTTRP00000002236/1-344 MSLTCKILTS FLLIFTVSTK GEVSE---NT EVIWGCLDHD INLDIPGFQM BACU002673/1-340 MSLTCKILAS FLLIFAVSTK GEVSE---NT KVIWGRLDHD INLDIPGFQM 51 100 ENSP00000358490/1-351 SDDIDDIKWE KTSDKKKIAQ FRKEKETFKE KDTYKLFKNG TLKIKHLKTD ENSBTAP00000022936/1-338 SDIVADIKWN R--NKNKIAR IKKDMPLHNE MDKYDMFTNG TLKIKTLMRN bmy_10613T0/1-295 NDGIADTRWD K--NKIKIAQ LKQDKPPYQI TDTYVMLKNG TLKIKALKRN ENSTTRP00000002236/1-344 NDRVADTRWD K--NKIKIAQ LKQHKPPYQI TDTYVMLKNG TLKIKALKRN BACU002673/1-340 NDGIADTRWD K--NKIKIAQ LKQDKPPYQI TDTYVMLKNG TLKIKALKRN 101 150 ENSP00000358490/1-351 DQDIYKVSIY DTKGKNVLEK IFDLKIQERV SKPKISWTCI NTTLTCEVMN ENSBTAP00000022936/1-338 DSGLYEVEVY DSNGVNLLSK KFDLKIQEML SGPEINWICT NRTVSCKVEN bmy_10613T0/1-295 DSDVYTVSVY DSNGKNILEK AFDLKIQEVV SKPVISWSCT NRTLICEVAK ENSTTRP00000002236/1-344 DSDVYTVSVY DLNGKNILEK AFDLKVQEMV SKPVISWSCT NRTLICEVAK BACU002673/1-340 DSDVYTVSVY DSNGKNILEK AFDLKIQEVV SKPVISWSCT NRTLICEVAK 151 200 ENSP00000358490/1-351 GTDPELNLYQ DGKHLKLS-Q RVITHKWTTS LSAKFKCTAG NKVSKESSVE ENSBTAP00000022936/1-338 GSNPKLQLFL NTTRVKQDHG KLITYTWNTR WNKTFMCVAS NHVDKKVSTE bmy_10613T0/1-295 GSDPKLKLFL NETSIKESHQ KVITHKWNSK WTASFNCVAS NN---RKVWI ENSTTRP00000002236/1-344 GSDPQLKLFI NETRIKESHQ KVITYKLKSK RTESFNCVAS NNVGAQTSRV BACU002673/1-340 GSDPKLKLFL NETRIKESHQ KVITHKWNSK WTASFNCMAS NNVSAQKSTV 201 250 ENSP00000358490/1-351 PVSCPEKGLD IYLIIGICGG GSLLMVFVAL LVFYITKRKK QRSRRNDEEL ENSBTAP00000022936/1-338 IAVCPDEGLD LYLIIGICVG GAVFLLFVAL LIFYISRRKK QSRRRDDEEL bmy_10613T0/1-295 SISSS----- ---------- ---------- -AFAEEAPSS LSSWRYSFST ENSTTRP00000002236/1-344 TISCSEKGLD IYLIIGICVG GTVFLVFVAL LVFYISKRKK QRSRRNDEEM BACU002673/1-340 TISCSEKGLD IYLIIGICGG GTVFLVFVAL LVFYISKRKK QRRKRNDEEL 251 300 ENSP00000358490/1-351 ETRAHRVATE ERGRKPHQIP ASTPQNPATS QHPPPPPGHR SQAPSHRPPP ENSBTAP00000022936/1-338 EIKAQRAILE ERGRKPQQTP VSTPANPGMS QT-PPVPGHR SQPPAHRPRA bmy_10613T0/1-295 LARGK----- NRGVR----- ------EMMS QT-PPIPGHR SQAPARRPRP ENSTTRP00000002236/1-344 EIRGKRLTPE ERGWKPHQIS GSTPQDPAMS K--PPIPGHR PQAPAHRPRP BACU002673/1-340 EIRGKRVTPE ERGLKPHQIP GSTPQNPAMS QT-PPIPGHR SQAPAHRPRP 301 350 ENSP00000358490/1-351 PGHRVQHQPQ KRPPAPSGTQ VHQQKGPPLP RPRVQPKPPH GAAENSLSPS ENSBTAP00000022936/1-338 LGPRVQPQQ- KRLPPTPGTQ VHQQKGPPLP KPRVQTKPPC DAEENS---- bmy_10613T0/1-295 PGPRVQHQQK KRPPPTLGKQ VHQQKGPPLP KPRVQMKPPC EAEENS---- ENSTTRP00000002236/1-344 PGPRVQHQQK KRPP-TPGKQ VHLQKGPPLP KPRVQTKPPC EVEENSLSSS BACU002673/1-340 PGPRVQHQQK KRPPPTLGKQ VHQQKGPPLP KPRVQTKPPC EAEENS---- 351 400 ENSP00000358490/1-351 SN ENSBTAP00000022936/1-338 -- bmy_10613T0/1-295 -- ENSTTRP00000002236/1-344 SN BACU002673/1-340 --