KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:24 2014 Check: 00 .. Name: bmy_13688T0/1-611 Len: 782 Check: 5174 Weight: 1.00 Name: BACU001408/1-720 Len: 782 Check: 7871 Weight: 1.00 Name: ENSTTRP00000009614/1-720 Len: 782 Check: 8788 Weight: 1.00 Name: ENSP00000350012/1-720 Len: 782 Check: 9842 Weight: 1.00 Name: ENSBTAP00000022939/1-720 Len: 782 Check: 8151 Weight: 1.00 // 1 50 bmy_13688T0/1-611 ---------- ---------- ---------- ---------M LWRRSQACMG BACU001408/1-720 MNNHVSSKPS TMKLKHTINP ILLYFIHFII SLYTILTYIP YYFLSDSRQE ENSTTRP00000009614/1-720 MNNHISSKPS TMKLKHTINP ILLYFIHFII SLYTILTYIP YYFLSESRQE ENSP00000350012/1-720 MNNHVSSKPS TMKLKHTINP ILLYFIHFLI SLYTILTYIP FYFFSESRQE ENSBTAP00000022939/1-720 MNNHGSSKPS SMKLKHTINP ILLYFIQFII SLYTILTYIP YYFLSESRQE 51 100 bmy_13688T0/1-611 RRNRSS---- ---------- -----GVA-- ---------- ---------- BACU001408/1-720 KSNQIKAKPV NSKPESAYRS VNSLDGLASV LYPGCDTLDK VFMHAKNKFK ENSTTRP00000009614/1-720 KSNQIKAKPV NSKPESAYRS VNSLDGLASV LYPGCDTLDK VFMHAKNKFK ENSP00000350012/1-720 KSNRIKAKPV NSKPDSAYRS VNSLDGLASV LYPGCDTLDK VFTYAKNKFK ENSBTAP00000022939/1-720 KSNRTKAKPV NSKPDSAYRS VNSLDGLASV LYPGCDTLDK VFMHAKNKFK 101 150 bmy_13688T0/1-611 ---------- ---------- ------VILG NYNWLSFEDV FVRAFNFGNG BACU001408/1-720 DKRLLGTREI LNEEDEVQPN GKIFKKVILG NYNWLSFEDV FVRAFNFGNG ENSTTRP00000009614/1-720 DKRLLGTREI LNEEDEVQPN GKIFKKVILG NYNWLSFEDV FVSAFNFGNG ENSP00000350012/1-720 NKRLLGTREV LNEEDEVQPN GKIFKKVILG QYNWLSYEDV FVRAFNFGNG ENSBTAP00000022939/1-720 DKRLLGTREI LNEEDEVQPN GKVFKKVILG SYNWLSYEDV FVRAFNFGNG 151 200 bmy_13688T0/1-611 LQILGQKPKT NIAIFCETRA EWMIAAQACF MYNFQLVTLY ATLGGPAIVH BACU001408/1-720 LQILGQKPKT NIAIFCETRA EWMIAAQACF MYNFQLVTLY ATLGGPAIVH ENSTTRP00000009614/1-720 LQILGQKPKT NIAIFCETRA EWMIAAQACF MYNFQLVTLY ATLGGPAIVH ENSP00000350012/1-720 LQMLGQKPKT NIAIFCETRA EWMIAAQACF MYNFQLVTLY ATLGGPAIVH ENSBTAP00000022939/1-720 LQMLGQKPKT NIAIFCETRA EWMVAAQACF MYNFQLVTLY ATLGGPAIVH 201 250 bmy_13688T0/1-611 GLNETEVTNI ITSKELLQTK LKDIVSLVPC LRHIITVDGK PPTWSEFPKG BACU001408/1-720 GLNETEVTNI ITSKELLQTK LKDIVSLVPC LRHVITVDGK PPAWSEFPKG ENSTTRP00000009614/1-720 GLNETEVTNI ITSKELLQTK LKDIVSLVPC LRHIITVDGK PPTWSEFPKG ENSP00000350012/1-720 ALNETEVTNI ITSKELLQTK LKDIVSLVPR LRHIITVDGK PPTWSEFPKG ENSBTAP00000022939/1-720 GLNETEVTNI ITSKELLQTK LKDIVSLVPR LRHIITVDGK PPTWSEFPKG 251 300 bmy_13688T0/1-611 VIVHTMAAVQ ALGAKASVEN KPHSKPVPSD IAVIMYTSGS TGLPKGVMIS BACU001408/1-720 VVVHTMAAVQ ALGAKASAEN KPHSKPVPSD IAVIMYTSGS TGLPKGVMIS ENSTTRP00000009614/1-720 VIVHTMAAVQ ALGAKASVEN KPHSKPVPSD IAVIMYTSGS TGLPKGVMIS ENSP00000350012/1-720 IIVHTMAAVE ALGAKASMEN QPHSKPLPSD IAVIMYTSGS TGLPKGVMIS ENSBTAP00000022939/1-720 VIVHTMAAVR ALGAKASMEN KPLSKPAPSD IAVIMYTSGS TGIPKGVMIS 301 350 bmy_13688T0/1-611 HSNLIAGITG MAERIPELGE KDVYIGYLPL AHVLELSAEL VCLSHGCCIG BACU001408/1-720 HSNLIAGITG MAERIPELGE KDVYIGYLPL AHVLELSAEL VCLSHGCCIG ENSTTRP00000009614/1-720 HSNLIAGITG MAERIPDLGE KDVYIGYLPL AHVLELSAEL VCLSHGCCIG ENSP00000350012/1-720 HSNIIAGITG MAERIPELGE EDVYIGYLPL AHVLELSAEL VCLSHGCRIG ENSBTAP00000022939/1-720 HSNIIAGITG MAERIPELGE KDVYIGYLPL AHVLELSAEL VCLSHGCRIG 351 400 bmy_13688T0/1-611 YSSPQTLADQ SSKIKKGSKG DTSILKPTLM AAVPEIMDRI YKNVMNKVNE BACU001408/1-720 YSSPQTLADQ SSKIKKGSKG DTSILKPTLM AAVPEIMDRI YKNVMNKVNE ENSTTRP00000009614/1-720 YSSPQTLADQ SSKIKKGSKG DTSILKPTLM AAVPEIMDRI YKNVMNKVNG ENSP00000350012/1-720 YSSPQTLADQ SSKIKKGSKG DTSMLKPTLM AAVPEIMDRI YKNVMNKVSE ENSBTAP00000022939/1-720 YSSPQTLADQ VFKIKKGSKG DTSMLKPTLM AAVPEIMDRI YKNVMNKVNE 401 450 bmy_13688T0/1-611 MSNFQRTLFI LAYNYKMEQI SKGHGTPLCD ---------- ---------- BACU001408/1-720 MSNFQRTLFI LAYNYKMEQI SKGHGTPLCD SFIFRKVRSL LGGNIRLLLC ENSTTRP00000009614/1-720 MSNFQRPRFI LAYNYKMEQI SKGHGTPLCD SFIFWKVRSL LGGNIRLLLC ENSP00000350012/1-720 MSSFQRNLFI LAYNYKMEQI SKGRNTPLCD SFVFRKVRSL LGGNIRLLLC ENSBTAP00000022939/1-720 MSSFQRNLFI LAYNYKMEQI SKGHSTPLCD SFIFRKVRGL LGGNIRLLLC 451 500 bmy_13688T0/1-611 ---------- ---------- ---------- ---------- -----RVGAP BACU001408/1-720 GGAPLSATTQ RFMNICFCCP VGQGYGLTES CGAGTITEVW DYNTGRVGAP ENSTTRP00000009614/1-720 GGAPLSATTQ RFMNICFCCP VGQGYGLTES CGAGTITEVW DYNTGRVGAP ENSP00000350012/1-720 GGAPLSATTQ RFMNICFCCP VGQGYGLTES AGAGTISEVW DYNTGRVGAP ENSBTAP00000022939/1-720 GGAPLSATTQ RFMNICFCCP VGQGYGLTES CGAGTITEVW DYNTGRVGAP 501 550 bmy_13688T0/1-611 LVCCEIKLKN WEEGGYFNTD KPHPRGEIII GGQNVTMGYY KNEAKTKADF BACU001408/1-720 LVCCEIKLKN WEEGGYFNTD KPHPRGEIII GGQNVTMGYY KNEAKTKADF ENSTTRP00000009614/1-720 LVCCEIKLKN WEEGGYFNTD KPHPRGEIII GGQNVTMGYY KNEAKTKADF ENSP00000350012/1-720 LVCCEIKLKN WEEGGYFNTD KPHPRGEILI GGQSVTMGYY KNEAKTKADF ENSBTAP00000022939/1-720 LVCCEIKLKN WEEGGYFNTD KPHPRGEILI GGQNVTMGYY KNEAKTKADF 551 600 bmy_13688T0/1-611 FEDENGQRWL CTGDIGEFDP DGCLKIIDRK KDLVKLQAGE YVSLGKVEAA BACU001408/1-720 FEDENGQRWL CTGDIGEFDP DGCLKIIDRK KDLVKLQAGE YVSLGKVEAA ENSTTRP00000009614/1-720 FEDENGQRWL CTGDIGEFDP DGCLKIIDRK KDLVKLQAGE YVSLGKVEAA ENSP00000350012/1-720 FEDENGQRWL CTGDIGEFEP DGCLKIIDRK KDLVKLQAGE YVSLGKVEAA ENSBTAP00000022939/1-720 FEDENGQRWL CTGDIGEFDP DGCLKIIDRK KDLVKLQAGE YVSLGKVEAA 601 650 bmy_13688T0/1-611 LKNLSLIDNI CAYANSEFCQ STAVRYESDS KRGXTRYALM RVAWDGEELI BACU001408/1-720 LKNLSLIDNI CAYAN----- ---------- ---------- ---------- ENSTTRP00000009614/1-720 LKNLSLIDNI CAYAN----- ---------- ---------- ---------- ENSP00000350012/1-720 LKNLPLVDNI CAYAN----- ---------- ---------- ---------- ENSBTAP00000022939/1-720 LKNLPLIDNI CAYAN----- ---------- ---------- ---------- 651 700 bmy_13688T0/1-611 AECQRSQLTA VNAVYAMWCL NQVALHFSYH SYVIGFVVPN QKELTELARK BACU001408/1-720 ---------- ---------- -------SYH SYVIGFVVPN QKELTELARK ENSTTRP00000009614/1-720 ---------- ---------- -------SYH SYVIGFVVPN QKELTELARK ENSP00000350012/1-720 ---------- ---------- -------SYH SYVIGFVVPN QKELTELARK ENSBTAP00000022939/1-720 ---------- ---------- -------SYH SYVIGFVVPN QKELTELARR 701 750 bmy_13688T0/1-611 RGLRGTWEEL CNSCEMENEV LKVLSEAAVS ASLEKFEIPV KIRLSPEPWT BACU001408/1-720 RGLRGTWEEL CNSCEMENEV LKVLSEAAVS ASLEKFEIPV KIRLSPEPWT ENSTTRP00000009614/1-720 RGLRGTWEEL CNSCEMENEV LKVLSEAAVS ASLEKFEIPV KIRLSPEPWT ENSP00000350012/1-720 KGLKGTWEEL CNSCEMENEV LKVLSEAAIS ASLEKFEIPV KIRLSPEPWT ENSBTAP00000022939/1-720 KGLHGTWEEL CNSCEMENEV LKVLSEAAIS ASLEKFEIPV KIRLSPEPWT 751 800 bmy_13688T0/1-611 PETGLVTDAF KLKRKELKTH YQADIERMYG RK BACU001408/1-720 PETGLVTDAF KLKRKELKTH YQADIERMYG RK ENSTTRP00000009614/1-720 PETGLVTDAF KLKRKELKTH YQADIERMYG RK ENSP00000350012/1-720 PETGLVTDAF KLKRKELKTH YQADIERMYG RK ENSBTAP00000022939/1-720 PETGLVTDAF KLKRKELKTH YQADIERMYG RK