KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:19:26 2014  Check: 00 ..

 Name: ENSP00000286428/1-197     Len:    197  Check:  2289  Weight:  1.00
 Name: BACU010890/1-145          Len:    197  Check:  7075  Weight:  1.00
 Name: ENSBTAP00000022946/1-197  Len:    197  Check:  1609  Weight:  1.00
 Name: bmy_17932T0/1-170         Len:    197  Check:  4301  Weight:  1.00
 Name: ENSTTRP00000015412/1-197  Len:    197  Check:  2255  Weight:  1.00

//


                          1                                                   50
ENSP00000286428/1-197     MAAVKDSCGK GEMATGNGRR LHLGIPEAVF VEDVDSFMKQ PGNETADTVL 
BACU010890/1-145          MAAVKDDCGL GEVAGGNGRR LHLGIPEAVF VEDVDSFMKQ PGNETADTVL 
ENSBTAP00000022946/1-197  MAASKDGCGV GEVAAGNGRR LHLGIPEAVF VEDVDSFMKQ PGNETADIVL 
bmy_17932T0/1-170         MAAGKDDCGL GEVAGGNGRR LHLGIPEAVF VEDVDSFMKQ PGNETADTVL 
ENSTTRP00000015412/1-197  MAAGKEGCVL GEVAGGNGRR LHLGIPEAVF VEDVDSFMKQ PGNETADTVL 


                          51                                                 100
ENSP00000286428/1-197     KKLDEQYQKY KFMELNLAQK KRRLKGQIPE IKQTLEILKY MQKKKESTNS 
BACU010890/1-145          KKLDEQYQKY KFMELNLAQK KRRLKGQIPE IKQTLEILKY MQKKK----- 
ENSBTAP00000022946/1-197  KKLDEQYQKY KFMELNLAQK KRRLKGQIPE IKQTLEILKY MQKKKESTSS 
bmy_17932T0/1-170         KKLDEQYQK- ---------- ---LKGQIPE IKQTLEILKY MQKKKESTNS 
ENSTTRP00000015412/1-197  KKLDEQYQKY KFMELNLAQK KRRLKGQIPE IKQTLEILKY MQKKKESTNS 


                          101                                                150
ENSP00000286428/1-197     METRFLLADN LYCKASVPPT DKMCLWLGAN VMLEYDIDEA QALLEKNLST 
BACU010890/1-145          ---------- ---------- --------AN VMLEYDIDEA QALLEKNLST 
ENSBTAP00000022946/1-197  LETRFLLADN LYCKASVPPT DKVCLWLGAN VMLEYDIDEA QALLEKNLLT 
bmy_17932T0/1-170         LETRFLLADN LYCKASVPPT DKVCLWLG-- ---------- -ALLEKNLST 
ENSTTRP00000015412/1-197  LETRFLLADN LYCKASVPPT DKVCLWLGAN VMLEYDIDEA QALLEKNLST 


                          151                                                200
ENSP00000286428/1-197     ATKNLDSLEE DLDFLRDQFT TTEVNMARVY NWDVKRRNKD DSTKNKA 
BACU010890/1-145          ATKNLDSLEE DLDFLRDQFT TTEVSILS-- ---------- ------- 
ENSBTAP00000022946/1-197  ATKNLDSLEE DLDFLRDQFT TTEVNMARVY NWDVKRRNKD DSTKNKA 
bmy_17932T0/1-170         ATKNLDSLEE DLDFLRDQFT TTEVNMARVY NWDVKRRNKD DPTKNKA 
ENSTTRP00000015412/1-197  ATKNLDSLEE DLDFLRDQFT TTEVNMARVY NWDVKRRNKD DSTKNKA