KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:27 2014 Check: 00 .. Name: ENSP00000340983/1-305 Len: 311 Check: 4888 Weight: 1.00 Name: ENSBTAP00000022955/1-306 Len: 311 Check: 4340 Weight: 1.00 Name: ENSTTRP00000004101/1-308 Len: 311 Check: 6259 Weight: 1.00 Name: bmy_02631T0/1-265 Len: 311 Check: 1884 Weight: 1.00 Name: BACU016658/1-309 Len: 311 Check: 6632 Weight: 1.00 // 1 50 ENSP00000340983/1-305 MGGTLAWTLL LP---LLLRE SDSLEPSCTV SSADVDWNAE FSATCLNFSG ENSBTAP00000022955/1-306 MGGPLMWALL LP---LLLHQ AGSQTSSCSV LSGYMDWTKE YFDTCLNFSG ENSTTRP00000004101/1-308 MGGAPVWVLL LP--LLLLLR PGSQELSCHV SSGDVDWTRE FTDTCLNFSG bmy_02631T0/1-265 MGGALVWVLL LPLLLLLLLH PGSQELSCPV SSGDVDWTRE FTDTCLNFSG BACU016658/1-309 MGGALVWVLL LP--LLLLLH PGSQELSCPV SSGDVDWTRE FSDTCLNFSG 51 100 ENSP00000340983/1-305 LSLS-LPHNQ SLRASNVILL DLSGNGLREL PVTFFAHLQK LEVLNVLRNP ENSBTAP00000022955/1-306 KILTQLPQNQ SLRARSVQLL DLSANGLQRL PWSFFRDLEQ LQLLIVTNNS ENSTTRP00000004101/1-308 QNLSLLPQNQ SLQASSLLHL DLSGNGLRKL PPLFFAHLGK LQVLDVTNNP bmy_02631T0/1-265 QNLSLLPQNQ SLQASSVLLL DLSGNGLREL PPLFFAHLGK LQVLDVTNNP BACU016658/1-309 QSLSLLPQNQ SLQASSVLLL DLSGNGLQEL PPLFFAHLGK LQVLDVTNNP 101 150 ENSP00000340983/1-305 LSRVDGALAA RCDLDLQADC NCALESWHDI RRDNCSGQKP LLCWDTTSSQ ENSBTAP00000022955/1-306 LDFVDRALAE RCGLELLADC SCALLDWHTD RQDNCSGPEL PRCLDVPTGA ENSTTRP00000004101/1-308 LDLVDRALAE HCDLDVRADC SCGLSPWHEV RRDNCSGPQP LLCLDVSTGA bmy_02631T0/1-265 LDPVGRALAE RCDLDLRADC SCVLLPWHKV RRDNCSGPLP LRCLDVSTGA BACU016658/1-309 LDPVGRALAE RCDLDLRADC SCVLLPWHKV RRDNCSGSLP LRCLDVSTSA 151 200 ENSP00000340983/1-305 -HNLSAFLEV SCAPGLASAT IGAVVVSGCL LLGLAIAGPV LAWRLWRCRV ENSBTAP00000022955/1-306 WHNLSVFLDV SCPSGLTKIA IGALAASGSL LLVLAIAGPV LAWRFCRHRM ENSTTRP00000004101/1-308 WCNVSAFLEV RCGLPLTMIT TGALVAGGSL LLMLAIAGPV LAWRLRRRRV bmy_02631T0/1-265 WHNVSAFLEV GCAPRLTMTI IGALVASGSL LLVLAIAGPV LAWRRCRHRV BACU016658/1-309 WHNVSAFLEV GCAPRLTMTT IGALVASGSL LLVLAIAGPA LAWRLCRHRV 201 250 ENSP00000340983/1-305 ARSRELNKPW AAQDGPKPGL GLQPRYGSRS -APKPQVAVP SCPSTPDYEN ENSBTAP00000022955/1-306 DQN--LSKTW ASQDGSRSGS GRQPRYSSQG RRPKSPANTP PRSSTPDYEN ENSTTRP00000004101/1-308 GSSWGMSKTW AAQNGPRSGS GQQPRYSSRG LSPKLPAATL PGSSTSDYEN bmy_02631T0/1-265 GSSRGMSKTW AAQNGPRSGS GQQPRYSSRG LSPKLPAATR PGSSTSDYEN BACU016658/1-309 GSSRGMSKTW AAQCGPRSGS GQQPRYSSRG LSPKLPAATR PGSSTSDYEN 251 300 ENSP00000340983/1-305 MFVGQPAAEH QWDEQGAHPS EDNDFYINYK DIDLASQPVY CNLQSLGQAP ENSBTAP00000022955/1-306 MFVGPPAARH QWDELRSPPS EGGDFYMTYD SLQHESQPVY CNLQSLSQVP ENSTTRP00000004101/1-308 MFVGQPAARH QWAEHRPHPS EDNDFYMNYE S-RHMSQPVY CNLQSLGQAP bmy_02631T0/1-265 M--------- ---------- ---------- ----SASPFR ------GQRL BACU016658/1-309 MFVGQPAARH QWAEHRPHPS EDSDFYMNYK SLHHDSQPVY CNLQSLGQAP 301 350 ENSP00000340983/1-305 MDEEEYVIPG H ENSBTAP00000022955/1-306 LDDEEYVVPG R ENSTTRP00000004101/1-308 SDEEEYVISG R bmy_02631T0/1-265 LHEL------ - BACU016658/1-309 LDEEEYVIPG R