KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:19:28 2014 Check: 00 .. Name: ENSP00000304908/1-553 Len: 554 Check: 1074 Weight: 1.00 Name: ENSBTAP00000022959/1-515 Len: 554 Check: 1797 Weight: 1.00 Name: bmy_14053T0/1-352 Len: 554 Check: 760 Weight: 1.00 Name: ENSTTRP00000009682/1-387 Len: 554 Check: 2388 Weight: 1.00 // 1 50 ENSP00000304908/1-553 MDVDKELGME SVKAGASGKP EMRLGTQEET SEGDANES-S LLVLSSNVPL ENSBTAP00000022959/1-515 MRSDNQ-GET NEGEDKGGQL QCQAKQRTKA VPSDQADTPS F----PEKTI bmy_14053T0/1-352 --------ME SDEAGAPEEL EMRPVHQADM NEGEATESPS LQVPSSHVTL ENSTTRP00000009682/1-387 VGCDKP-EME SDEAGAPEEP EMRPVNQADM NEGEATESPS LQVLSSHVTL 51 100 ENSP00000304908/1-553 LALEFLEIAQ AKEKAFLPMV SHTFHMRTEE SDASQEGDDL PKSSANTSHP ENSBTAP00000022959/1-515 L--------- -SKEREILDS PQQNILPKQA ATLNSSIQTI S--------P bmy_14053T0/1-352 L------VPA HTPEAFVHEV SNVQHIPAER SEVLQAMDTL P--------P ENSTTRP00000009682/1-387 L------VPA HTREAFVHEV SNVQHTPAER SEVLQAMDTL P--------P 101 150 ENSP00000304908/1-553 KQDDSPKSSE ETIQPKEGDI PKAPEETIQS KKEDLPKSSE KAIQPKESNI ENSBTAP00000022959/1-515 KQGNIPNFPE KNILPKEGDI LNPPSKTTLH KQANTPNSSE KTTLPKQGDT bmy_14053T0/1-352 EQGS------ --------DT LSSPAQTIPP KQADTPNSPT QNIL------ ENSTTRP00000009682/1-387 EQGS------ --------DT LSSPAQTIPP KQADTPNSPT QTVLPDQADT 151 200 ENSP00000304908/1-553 PKSSAKPIQP KLGNIPKASV KPSQPKEGDI PKAPEETIQS KKEDLPKSSE ENSBTAP00000022959/1-515 PKPSAKINPS RQADSPKFPA KIILPKQADS PNSPNQILPP KRTDSPSFPG bmy_14053T0/1-352 ---------- ---------- ----PKQGDF LSSSAKPIPP EQADAPSFPE ENSTTRP00000009682/1-387 ---------- -----LNFPE ETIPPKEGDI LNFPAKIIPP KQADTPNSPA 201 250 ENSP00000304908/1-553 EAIQPKEGDI PKSSAKPIQP KLGNIAKTSV KPSQPKESDI PKSPEETIQP ENSBTAP00000022959/1-515 KIISSQQADS PKFPLKTA-- ---------- ---LHRQVDI PTSSEKNISP bmy_14053T0/1-352 KIILPNEGGI LNSPEKTI-- ---------- ---LPNQAGT PNSSTQTVSP ENSTTRP00000009682/1-387 EIISPKKGDT PSSPLKTI-- ---------- ---LCKQADI PNSSEKNTSP 251 300 ENSP00000304908/1-553 KEGDIPKSSA KPIQPKLGNI PKASVKPSQP KEGDISKSPE EAIQPKEGDL ENSBTAP00000022959/1-515 KQDNTPNFPA KFSLPKKSKT HKFTTKAILS KQGDTPKSSA KTIVPKEGET bmy_14053T0/1-352 KQGDTPKSPE KTIPPKEG-- ---------- ---------- ---------- ENSTTRP00000009682/1-387 KQGNTPNFPA KFILPGQGHT HKLS------ ---------- ---------- 301 350 ENSP00000304908/1-553 PKSLEEAIQP KEGDIPKSPE EAIQPKEGDI PKSLEEAIQP KEGDIPKSPE ENSBTAP00000022959/1-515 PKPSAETILP KAGEIPKSSA ETILPKEGET LKSSAKTILP KDGETPKSST bmy_14053T0/1-352 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009682/1-387 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000304908/1-553 ETIQPKKGDI PKSPEEAIQP KEGDIPKSPK QAIQPKEGDI PKSLEEAIPP ENSBTAP00000022959/1-515 KTILLKEGET PKSSAETILP KDGETPKSSA ETILPKEGET PKSSAETILP bmy_14053T0/1-352 --------EI LNSPLKTILR KQGNTLKLSA KTILPKEGDT PKSLEDTIQP ENSTTRP00000009682/1-387 -AILSKLCDT LKFSAKTVLP KEGDAPKSSA ETVLPKEGDT PKSLEDTIQP 401 450 ENSP00000304908/1-553 KEIDIPKSPE ETIQPKEDDS PKSLEEATPS KEGDILKPEE ETMEFPEGDK ENSBTAP00000022959/1-515 KEGETPKSST ETILLKAGET TRSLEHTVWS AEGNSLQSEE DT-ELLDDNL bmy_14053T0/1-352 IEVN------ ---------- ---------- -----LQSAD EAMEVLAEDL ENSTTRP00000009682/1-387 IEGN------ ---------- ---------- -----LQSAD EAMEVLEEDL 451 500 ENSP00000304908/1-553 VKVILSKEDF EASLKEAGER LVAVDFSATW CGPCRTIRPF FHALSVKHED ENSBTAP00000022959/1-515 VKVILSKDDF KMALKEAGEQ LVAVDFSATW CRPCKTIKSL FQALSLKHED bmy_14053T0/1-352 VKVILSKEDF EVALKEAGER LVAVDFSATW CRPCRSIKPL FQSLCMKHKG ENSTTRP00000009682/1-387 VKVILSKEDF EVALKEAGER LVAVDFSAMW CRPCRSIKPL FRSLSMKHKD 501 550 ENSP00000304908/1-553 VVFLEVDADN CEEVVRECAI MCVPTFQFYK KEEKVDELCG ALKEKLEAVI ENSBTAP00000022959/1-515 VVFLEVDADE CEELVRECKV DCIPTFQFYR KEEKVGQFSG ALHEKLETLI bmy_14053T0/1-352 VVFLEVGADE CEGLAKDCNI VCIPTFQFYK KEEKVGEXSG ALKEKLETLI ENSTTRP00000009682/1-387 VVFLEVDADE CEGLAKDCNI VCVPTFQFYK KEEKVGEFSG ALKEKLETFI 551 600 ENSP00000304908/1-553 AELK ENSBTAP00000022959/1-515 AELK bmy_14053T0/1-352 TALK ENSTTRP00000009682/1-387 TALK