KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:19:29 2014 Check: 00 .. Name: ENSBTAP00000022964/1-533 Len: 604 Check: 2993 Weight: 1.00 Name: ENSTTRP00000015205/1-573 Len: 604 Check: 3391 Weight: 1.00 Name: bmy_07526T0/1-545 Len: 604 Check: 8973 Weight: 1.00 Name: BACU001743/1-586 Len: 604 Check: 9192 Weight: 1.00 // 1 50 ENSBTAP00000022964/1-533 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015205/1-573 -----DSGAG LRGGRGRTDG PRRDGGCGRS ARVLRVGQRH SDHQCPGPLR bmy_07526T0/1-545 ---------- ---------- ---------- ---------- ---------- BACU001743/1-586 SGSPQDSGAG LRGGRGRTDG PRRDGGCGRS ARVLRVGQRH SDHQCPGPLR 51 100 ENSBTAP00000022964/1-533 ------MFQF HAGSWESWCC CCCLIPGDRP WDRGRRWRLE MADTRSVHET ENSTTRP00000015205/1-573 LLLEMLFLSF HAGSWERWCC CCCLIPADRP WDRGRRWRLE MADTRSVHET bmy_07526T0/1-545 ------MFQF HAGSWESWCC CCCLIPADRP WDRGRRWRLE MADTRSVHET BACU001743/1-586 LLLEMLFLSF HAGSWESWCC CCCLIPADRP WDRGRRWRLE MADTRSVHET 101 150 ENSBTAP00000022964/1-533 RFEAAVKVIQ SLPKNGSFQP TNEMMLKFYS FYKQATEGPC KLSKPGFWDP ENSTTRP00000015205/1-573 RFEAAVKVIQ SLPKNGSFQP TNEMMLKFYS FYKQATEGPC KLSRPGFWDP bmy_07526T0/1-545 RFEAAVKVIQ SLPKNGSFQP TNEMMLKFYS FYKQATEGPC KLSRPGFWDP BACU001743/1-586 RFEAAVKVIQ SLPKNGSFQP TNEMMLKFYS FYKQATEGPC KLSRPGFWDP 151 200 ENSBTAP00000022964/1-533 VGRYKWDAWS SLGDMTKEEA MIAYVEEMKK ILETMPMTEK VEELLHVIGP ENSTTRP00000015205/1-573 IGRYKWDAWS SLGDMTKEEA MIAYVEEMKK ILETMPMTEK VEELLHVIGP bmy_07526T0/1-545 IGRYKWDAWN SLGDMTKEEA MIAYVEEMKK ILETMPMTEK VEELLHVIGP BACU001743/1-586 IGRYKWDAWN SLGDMTKEEA MIAYVEEMKK ILETMPMTEK VEELLHVIGP 201 250 ENSBTAP00000022964/1-533 FYEIVEDKKS GRSSDLTSVR LEKISKCLED LGNVLASTPN AKTVNGKAES ENSTTRP00000015205/1-573 FYEIIEDKKS GRSSDLTS-- ---------D LGNVLTSTPN AKTLNGKAES bmy_07526T0/1-545 FYEIVEDKKS GRSSDLTSVR VEKISKYLED LGNVLTSTPN AKTLNGKAES BACU001743/1-586 FYEIVEDKKS GRSSDLTSVQ VEKISKYLED LGNVLTSTPN AKTLNGKAES 251 300 ENSBTAP00000022964/1-533 SDSGAESEEE AAQEDPKRPE PCDSDKKMMK KSADHKNLEI IVSNGYDKDS ENSTTRP00000015205/1-573 SDSGAESEEE EAQEGVKGAE QSDSDKKMMK KSADHKNLEI VVTNGYEKDS bmy_07526T0/1-545 SDSGAESEEE EAQEGVKGAE QSDNDMKMMK KSADHKNLEI VVTNGYEKDS BACU001743/1-586 SDSGAESEEE EAQEGVKGAE QSDNDKKMMK KSADHKNLEI VVTNGYEKDS 301 350 ENSBTAP00000022964/1-533 FVQGVQNSIH TSPSLNGRCT EEVKSVDENL EQTGKTVVFV HQ-----DVN ENSTTRP00000015205/1-573 FVQGVQNDIH ASPSLNGRGA ETVKSADQNL EQTEETAVCV HQ-----DVN bmy_07526T0/1-545 FVQGVQNDIH ASPSLNGRGA ETVKXVDQNL EQTEKTAVCV HQGQQNKDVN BACU001743/1-586 FVQGVQNDIH ASPSLNGRGA ETVKSVDQNL EQTEKTAVCV HQ-----DVN 351 400 ENSBTAP00000022964/1-533 SDHVEDISGI QHLTSDSDSE VYCDSMEQFG QEESLDGFIS NNGPFSYYLG ENSTTRP00000015205/1-573 DDHVEDVSAI QHLTSDSDSE VYCDSMEQFG QEESSDSFTS NNGPFRYYLG bmy_07526T0/1-545 DDHVEDVSAI QHLTSDSDSE VYCDSMEQFG QEESLDSFTS NSGPFRYYLG BACU001743/1-586 DDHVEDVSAI QHLTSDSDSE VYCDSMEQFG QEESLDSFTS NNGPFRYYLG 401 450 ENSBTAP00000022964/1-533 GNPSQPLESS GFPEAVQGLP GNGSPEDMQG TVVEGKGEVK RGGEDGGSNS ENSTTRP00000015205/1-573 GNPSQPLESS GFPEDVQVSP GNGNRGDTQA AAVEGKGEVK HGGEDGGNNS bmy_07526T0/1-545 GNPSQPLESS GFPEDVQVSP GNGHRGDTQA AAVEGKGEVK HGGEDGGSNS BACU001743/1-586 GNPSQPLESS GFPEDVQVSP GNGNRGDTQA AAVEGKGEVK HGGEDGGSNS 451 500 ENSBTAP00000022964/1-533 GAPHREKRAG ESEEFSNIRR GRGHRMQHLS EGSKGRQVGS GGDGERWGSD ENSTTRP00000015205/1-573 GAPHREKRAG ESEEFSNVRR GRGHRMQHLS EGSKGRQVGS GGDGERWGSD bmy_07526T0/1-545 GAPHREKRAG ESEEFSNIRR GRGHRMQHLS EGSKGRQVGS GGDGERWGSD BACU001743/1-586 GAPHREKRAG ESEEFSNIRR GRGHRMQHLS EGSKGRQVGS GGDGERWGSD 501 550 ENSBTAP00000022964/1-533 RGSRGSLNEQ IALVLMRLQE DMQNVLQRLH KLEMLAASQA KSSALQTSNQ ENSTTRP00000015205/1-573 RGSRGSLNEQ IALVLMRLQE DMQNVLQRLH KLETLTASQA KSSALQTSNQ bmy_07526T0/1-545 RGSRGSLNEQ IALVLMRLQE DMQNVLQRLH KLETLTASQA KSSALQTGNQ BACU001743/1-586 RGSRGSLNEQ IALVLMRLQE DMQNVLQRLH KLETLTASQA KSSALQTDNQ 551 600 ENSBTAP00000022964/1-533 PTSP------ ----RPSWWP FEMSPGALTF AIIWPFIAQW LVHLYYQRRR ENSTTRP00000015205/1-573 PPSL------ ----RPSWWP FEMSPGALIF AIIWPFIAQW LVHLYYQRRR bmy_07526T0/1-545 PPSPTGDQLI LFSQRPSWWP FEMSPGALIF AIIWPFIAQW LVHLYYQRRR BACU001743/1-586 PPSP------ ----RPSWWP FEMSPGALIF AIIWPFIAQW LVHLYYQRRR 601 650 ENSBTAP00000022964/1-533 RKLN ENSTTRP00000015205/1-573 RKLN bmy_07526T0/1-545 R--- BACU001743/1-586 R---