KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:19:36 2014 Check: 00 .. Name: ENSP00000356094/1-424 Len: 425 Check: 5671 Weight: 1.00 Name: ENSBTAP00000022994/1-422 Len: 425 Check: 1230 Weight: 1.00 Name: bmy_02374T0/1-385 Len: 425 Check: 6683 Weight: 1.00 Name: BACU015307/1-381 Len: 425 Check: 2211 Weight: 1.00 // 1 50 ENSP00000356094/1-424 MDSGPLWDAN PTPRGTLSAP NATTPWLGRD EELAKVEIGV LATVLVLATG ENSBTAP00000022994/1-422 MDSRPPWTAA PTPGSTLSAA NATTPWLGRD EELAKVEIGV LATVLALATG bmy_02374T0/1-385 MDPGPPWITS PTPGSTLSVP NATTPWLGRD EELAKVEIGV LATVLVLATG BACU015307/1-381 MDPGPPWITS PTPGSTLSVP NATTPWLGRD EELAKVEIGV LATVLVLATG 51 100 ENSP00000356094/1-424 GNLAVLLTLG QLGRKRSRMH LFVLHLALTD LAVALFQVLP QLLWDITYRF ENSBTAP00000022994/1-422 GNLTVLLTVG QPVRKRSRMQ VFVLHLALTD LGVALFQVLP QLLWDITYRF bmy_02374T0/1-385 GNLTVLLTVG QPGRKRSRMH LFVLHLALTD LGVALFQVLP QLLWDITYRF BACU015307/1-381 GNLTVLLTVG QPGRKRSRMH LFVLHLALTD LGVALFQVLP QLLWDITYRF 101 150 ENSP00000356094/1-424 QGPDLLCRAV KYLQVLSMFA STYMLLAMTL DRYLAVCHPL RSLQQPGQST ENSBTAP00000022994/1-422 RGPDPLCRAV KYLQVLSMFA STYMLLAMTL DRYLAVCHPL RSLQQPSRST bmy_02374T0/1-385 QGPDPLCRAI KYLQVLSMFA STYMLLAMTL DRYLAVCHPL CSLQQPSRST BACU015307/1-381 QGPDPLCWAI KYLQVLSMFA STYMLLAMTL DRYLAVCHPL CSLQQPSRAL 151 200 ENSP00000356094/1-424 YLLIAAPWLL AAIFSLPQVF IFSLREVIQG SGVLDCWADF GFPWGPRAYL ENSBTAP00000022994/1-422 YPLIAAPWLL AAVLSLPQVF IFSIREVIQG SGVLDCWADF RFPWGPRAYI bmy_02374T0/1-385 YPLIAAPWLL AAILSLPQVF IFSLREVIQG SGVLDCWADF RFPWGPRAYI BACU015307/1-381 ---------- ---------- ---------- -GVLDCWADF RFPWGPRAYI 201 250 ENSP00000356094/1-424 TWTTLAIFVL PVTMLTACYS LICHEICKNL KVKTQAWRVG GGGWRTWDRP ENSBTAP00000022994/1-422 TWTTLAIFIL PVAMLTACYG LICHEICRNL KVKTEAGQAE GGSWGTGNRP bmy_02374T0/1-385 TWTTLAIFIL PVAMLTACYS LICHEICKNL KVKTGAWKVE GGGWRTRNRP BACU015307/1-381 TWTTLAIFIL PVAMLTACYS LICHEICKNL KVKTGAWKVE GGGWRTWNRP 251 300 ENSP00000356094/1-424 S-PSTLAATT RGLPSRVSSI NTISRAKIRT VKMTFVIVLA YIACWAPFFS ENSBTAP00000022994/1-422 S-ARGPVAAP RGLPSRVSSV SAISRAKIRT VKMTFVIVLA YIACWAPFFS bmy_02374T0/1-385 SPPSAPAAAT RGLPSRVSST STISRAKIRT VKMTFVIVLA YIACWAPFFS BACU015307/1-381 SPPSAPAAAT RGLPSRVSST STISRAKIRT VKMTFVIVLA YIACWAPFFS 301 350 ENSP00000356094/1-424 VQMWSVWDKN APDEDSTNVA FTISMLLGNL NSCCNPWIYM GFNSHLLPRP ENSBTAP00000022994/1-422 VQMWSVWDEN APDEDSTNVA FTISMLLGNL SSCCNPWIYM GFNSHLWLHA bmy_02374T0/1-385 VQMWSVWDEN APDEGKCVV- ---------- ------W--- ---------- BACU015307/1-381 VQMWSVWDEN APDEGKCVVC ---------- -SCCNPWIYM GFNGHLWPRS 351 400 ENSP00000356094/1-424 LRHLACCGGP QPRMRRRLSD GSLSSRHTTL LTRSSCPATL SLSLSLTLSG ENSBTAP00000022994/1-422 LRRLACCGGP GPRMRRRLSN GSLSSRHATL LTRSSGPPAR GLSPG--LSR bmy_02374T0/1-385 --------GP GPRMCRQLSS GSPSSRRAML LTRSSVLPTL SLSPR--LSR BACU015307/1-381 LCRLACCGGP GPRMCRQLSS GSPSSRRAML LTRSSVLPTL SLSPR--LSQ 401 450 ENSP00000356094/1-424 RPRPEESPRD LELADGEGTA ETIIF ENSBTAP00000022994/1-422 RPGPKDSLRG AEQVEGDAAT ETSIF bmy_02374T0/1-385 RPGPEDPLKG EEQVDRDTIT ETSIF BACU015307/1-381 RPGPEDPLKG EEQVDRDTIT ETSIF