KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:38 2014 Check: 00 .. Name: ENSP00000360270/1-524 Len: 524 Check: 850 Weight: 1.00 Name: ENSTTRP00000006972/1-523 Len: 524 Check: 3331 Weight: 1.00 Name: ENSBTAP00000023044/1-523 Len: 524 Check: 5310 Weight: 1.00 Name: bmy_19544T0/1-492 Len: 524 Check: 6509 Weight: 1.00 Name: BACU000221/1-524 Len: 524 Check: 8739 Weight: 1.00 // 1 50 ENSP00000360270/1-524 MSFICGLQSA ARNHVFFRFN SLSNWRKCNT LASTSRGCHQ VQVNHIVNKY ENSTTRP00000006972/1-523 MSFICGLQFA ARNCVFFRFN LLTSWRKCNT QAVTSLDCHQ VKINNIVNKS ENSBTAP00000023044/1-523 MSFIYGLQSA ARNCFFFRFN LLTNWRKCNT QAVTSRDFHQ VKINHIVNKS bmy_19544T0/1-492 MSFICGLQFA ARNCVFFRFN LLTSWRKCNT QAVTSLDCHQ VKINNIVNKS BACU000221/1-524 MSFICGLQFA ARNCVFFRLN LLTSWRKCNT QAVTSLDCHQ VKINNIVNKS 51 100 ENSP00000360270/1-524 QGLGVNQCDR WSFLPGNFHF YSTFNNKRTG GLSSTKSKEI WRITSKCTVW ENSTTRP00000006972/1-523 LGLGVNQGDR WTFLPENVHF CRTFNNKRTG FLLSTRSKET WMIPQKCTAW ENSBTAP00000023044/1-523 LGLGVNHGDR WTPLPENFLF YRTFNTKRKG CLLSSRSKEI WMISRKCTAW bmy_19544T0/1-492 LGLGVNQGDR WTFLPENFHF YRTFNNKRTG CLLSTRSKEI WMITQKCTAW BACU000221/1-524 LGLGVNQGDR WTFLPENFHF YRTFNNKRTG CLLSTRSKEI WMITQKCTAW 101 150 ENSP00000360270/1-524 NDAFSRQLLI KEVTAVPSLS VLHPLSPASI RAIRNFHTSP RFQAAPVPLL ENSTTRP00000006972/1-523 NNSFSRQLLM KDVLVVPALS VVHPLNCLPT RDIRRFHTSS RFQAAPVPLL ENSBTAP00000023044/1-523 TDSFSRQLPM KNVPVVPAHS MSHPLNCLPT RDIRSFHTSP RCQAAPAPLL bmy_19544T0/1-492 NNSFSRQLLM KDILVVPALS VVHPLNCLPT RDIRSFHTSP RFQAAPVPLL BACU000221/1-524 NNSFSRQLLM KDVPVVPALS VVHPVNCLPT RDIRSFHTSP RFQAAPVPLL 151 200 ENSP00000360270/1-524 LMILKPVQKL FAIIVGRGIR KWWQALPPNK KEVVKENIRK NKWKLFLGLS ENSTTRP00000006972/1-523 LMILKPVQKL LAIIVGRGIR KWWQALPPNK KELFKESVRK NKWKLFLGLS ENSBTAP00000023044/1-523 LMILKPAQKL LAIIVGRGIR KWWQALPPNK KELFKESLRK NKWKLFLGLS bmy_19544T0/1-492 LMILKPVQKL LAIIVGRGIR KWWQALPPNK KELFKESVRK NKWKLFLGLS BACU000221/1-524 LMILKPVQKL LAIIVGRGIR KWWQALPPNK KELFKESVRK NKWKLFLGLS 201 250 ENSP00000360270/1-524 SFGLLFVVFY FTHLEVSPIT GRSKLLLLGK EQFRLLSELE YEAWMEEFKN ENSTTRP00000006972/1-523 SFGLLFVLFY FTHLEVSPVT GRSKLLLLGK EHFRLLSELE YEAWMEEFKN ENSBTAP00000023044/1-523 SFGLLFVVFY FTHLEVSPVT GRSKLLILGK EHFRLLSELE YEAWMEEFKN bmy_19544T0/1-492 SFGLLFVVFY FTHLEVSPVT GRSKLLLLGK EHFRLLSELE YEAWMEEFKN BACU000221/1-524 SFGLLFVVFY FTHLEVSPVT GRSKLLLLGK EHFRLLSELE YEAWMEEFKN 251 300 ENSP00000360270/1-524 DMLTEKDARY LAVKEVLCHL IECNKDVPGI SQINWVIHVV DSPIINAFVL ENSTTRP00000006972/1-523 DMLTEKDTRY MAVKEVVHHL IECNKDIPGI SEINWIIHVV DSPDINAFVL ENSBTAP00000023044/1-523 DMLTEKDARY VAVKAVVHHL IECNQDIPGI SEINWIIHVV DSPDINAFVL bmy_19544T0/1-492 DMLTEKDARY VAVKEVVHHL IECNKDIPGI SEINWIIHVV DSPDINAFVL BACU000221/1-524 DMLTEKDTRY VAVKEVVHHL IECNKDIPGI SEINWIIHVV DSPDINAFVL 301 350 ENSP00000360270/1-524 PNGQMFVFTG FLNSVTDIHQ LSFLLGHEIA HAVLGHAAEK AGMVHLLDFL ENSTTRP00000006972/1-523 PNGQVFIFTG LLNSVTDIHQ LSFLLGHEIA HAILEHAAEK ASLVHFLDFL ENSBTAP00000023044/1-523 PNGQVFVFTG LLNSVTDIHQ LSFLLGHEIA HAVLEHAAEK ASLVHLLDFL bmy_19544T0/1-492 PNGQVFIFTG LLNSVTDIHQ LSFLLGHEIA HAVLEHAAEK ASLVHFLDFL BACU000221/1-524 PNGQVFIFTG LLNSVTDIHQ LSFLLGHEIA HAVLEHAAEK ASLVHFLDFL 351 400 ENSP00000360270/1-524 GMIFLTMIWA ICPRDSLALL CQWIQSKLQE YMFNRPYSRK LEAEADKIGL ENSTTRP00000006972/1-523 GLIFLTMIWA ICPRDSLALL GQWIQSK-QE FMFDRPYSRT LEAEADKIGL ENSBTAP00000023044/1-523 GLIFLTTIWA ICPRDSLALL GQWIQSKLQE FLFDRPYSRT LEAEADRIGL bmy_19544T0/1-492 GLIFLTMIWA ICPRDSLALL GQWIQSKLRE FMFDRPYSRT LEAEADKIGL BACU000221/1-524 GLIFLTMIWA ICPRDSLALL GQWIQSKLQE FMFDRPYSRT LEAEADKIGL 401 450 ENSP00000360270/1-524 LLAAKACADI RASSVFWQQM EFVDSLHGQP KMPEWLSTHP SHGNRVEYLD ENSTTRP00000006972/1-523 QLAAKXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000023044/1-523 QLAAKACVDV RASSVFWQQM EFAESLHGHP KLPEWLSTHP SHGNRAEHLD bmy_19544T0/1-492 QLAAKACVDV RASSVFWQQM EFAESLHGLP KLPEWLSTHP SHGNRAEHLD BACU000221/1-524 QLAAKACVDV RASSVFWQQM EFAESLHGLP KLPEWLSTHP SHGNRAEHLD 451 500 ENSP00000360270/1-524 RLIPQALKIR EMCNCPPLSN PDPRLLFKLS TKHFLEESEK EDLNITKKQK ENSTTRP00000006972/1-523 XXXXXALKIR ESCNCPPLSG TDPRLLFKLS MKNFLEEAEK EDLNITVKPK ENSBTAP00000023044/1-523 RLIPQALKIR ETCNCPPLSG PDPRLLFKLS MKNFL-EAEK EDLNITVKQK bmy_19544T0/1-492 RLIPQCPGI- ----CLPFTD PPP------- ---------- ------APSP BACU000221/1-524 RLIPQALKIR ETCNCPPLSG PDPRLLFKLS MKNFLEEAEK EDLNTTVKPK 501 550 ENSP00000360270/1-524 MDTLPIQKQE QIPLTYIVEK RTGS ENSTTRP00000006972/1-523 MDTLPIQNEK QIALTCIVEK RTGS ENSBTAP00000023044/1-523 MDALPIQNQK QIPLTCIVDK RTGS bmy_19544T0/1-492 YQPLRLSAE- ---LFCVASA QGEL BACU000221/1-524 MDTLPIQNEK QIPLTCIVEK RTGS