KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:40 2014 Check: 00 .. Name: ENSTTRP00000016123/1-696 Len: 767 Check: 636 Weight: 1.00 Name: bmy_11697T0/1-399 Len: 767 Check: 4268 Weight: 1.00 Name: ENSP00000402257/1-615 Len: 767 Check: 7672 Weight: 1.00 Name: BACU006974/1-606 Len: 767 Check: 1298 Weight: 1.00 Name: ENSBTAP00000023058/1-579 Len: 767 Check: 3620 Weight: 1.00 // 1 50 ENSTTRP00000016123/1-696 ILLFVLWCSG TCERSGGEAG VVILCIHIPV IVLPEETGLG SRPHVLLSSS bmy_11697T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSP00000402257/1-615 ------MCHP DKAFTSDKLQ CVFNEYKAAV WVPPRPRPLS RAPLP----- BACU006974/1-606 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023058/1-579 ---------- ---------- ---------- ---------- -NYPV----- 51 100 ENSTTRP00000016123/1-696 TFLLQVQSGV SALHLSLPGR RTRPAPCLGL CRPSPSDGPP LCRCPFQNRR bmy_11697T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSP00000402257/1-615 ---------- ---------- ---------- ---------- ---------- BACU006974/1-606 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023058/1-579 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000016123/1-696 HEPARLLLGE SHFLCVLDSG MPDRTEKHST MPDSPVDVKT PSRLTPPTMP bmy_11697T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSP00000402257/1-615 ---------- ---------- -EDRTEKHST MPDSPVDVKT QSRLTPPTMP BACU006974/1-606 ---------- ---------- ---------- MPDSPVDVKT PSRLTPPTMP ENSBTAP00000023058/1-579 ---------- ---------- -RNRTEKHST MPDSPVDVKT PSRLTPPTMP 151 200 ENSTTRP00000016123/1-696 PPPTTQGAPR TSSFTPTTLT NGTSHSPTAL NGAPSPPNGF SNG-SSSSSS bmy_11697T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSP00000402257/1-615 PPPTTQGAPR TSSFTPTTLT NGTSHSPTAL NGAPSPPNGF SNGPSSSSSS BACU006974/1-606 PPPTTQGAPR TSSFTPTTLT NGTSHSPTAL NGAPSPPNGF SNGPSSSSSS ENSBTAP00000023058/1-579 PPPTTQGAPR TSSFTPTTLT NGSSHSPTAL NGAPSPPNGF SNGPSSSSSS 201 250 ENSTTRP00000016123/1-696 SLANQQLPPA CGARQLSKLK RFLTTLQQFG NDISPEIGER VRTLVLGLVN bmy_11697T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSP00000402257/1-615 SLANQQLPPA CGARQLSKLK RFLTTLQQFG NDISPEIGER VRTLVLGLVN BACU006974/1-606 SLANQQLPPA CGARQLSKLK RFLTTLQQFG NDISPEIGER VRTLVLGLVN ENSBTAP00000023058/1-579 SLANQQLPPA CGARQLSKLK RFLTTLQQFG NDISPEIGER VRTLVLGLVN 251 300 ENSTTRP00000016123/1-696 STLTIEEFHS KLQEATNFPL RPFVIPFLK- ---------- ---------- bmy_11697T0/1-399 ---------- ---------- ---------- ---------- ---------- ENSP00000402257/1-615 STLTIEEFHS KLQEATNFPL RPFVIPFLK- ---------- ---------- BACU006974/1-606 STLTIEEFHS KLQEATNFPL RPFVIPFLKK YYFMYLKINS WTEYIKAVSG ENSBTAP00000023058/1-579 STLTIEEFHS KLQEATNFPL RPFVIPFLK- ---------- ---------- 301 350 ENSTTRP00000016123/1-696 ---------- --------XX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11697T0/1-399 ---------- --------MN L--------- ---------- -----HQIQL ENSP00000402257/1-615 ---------- --------AN LPLLQRELLH CARLAKQNPA QYLAQHEQLL BACU006974/1-606 REPGNALPKD ICTQDVQPAN LPLLQRELLH CARLAKQNPA QYLAQHEQLL ENSBTAP00000023058/1-579 ---------- --------AN LPLLQRELLH CARLAKQNPA QYLAQHEQLL 351 400 ENSTTRP00000016123/1-696 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXT KENGFDREPL HSEHPSKRPC bmy_11697T0/1-399 IQG------- ---------- ---------T KENGFDREPL HSEHPSKRPC ENSP00000402257/1-615 LDASTTSPVD SSELLLDVNE NGKRRTPDRT KENGFDREPL HSEHPSKRPC BACU006974/1-606 LDASTTSPVD SSELLLDVNE NGKRRTPDRT KENGFDREPL HSEHPSKRPC ENSBTAP00000023058/1-579 LDASTTSPVD SSELLLDVNE NGKRRTPDRT KENGFDREPL HSEHPSKRPC 401 450 ENSTTRP00000016123/1-696 TISPGQRYSP NNGLSYQPNG LPHPTPPPPQ HYRLDDMAIA HHYRDSYRHP bmy_11697T0/1-399 TISPGQRYSP NNGLSYQPNG LPHPTPPPPQ HYRLDDMAIA HHYRDSYRHP ENSP00000402257/1-615 TISPGQRYSP NNGLSYQPNG LPHPTPPPPQ HYRLDDMAIA HHYRDSYRHP BACU006974/1-606 TISPGQRYSP NNGLSYQPNG LPHPTPPPPQ HYRLDDMAIA HHYRDSYRHP ENSBTAP00000023058/1-579 TISPGQRYSP NNGLSYQPNG LPHPT-PPPQ HYRLDDMAIA HHYRDSYRHP 451 500 ENSTTRP00000016123/1-696 SHRDLRDRNR PMGLHGTRQE EMIDHRLTDR EWAEEWKHLD HLLNCIMDMV bmy_11697T0/1-399 SHRDLRDRNR PMGLHGTRQE EMIDHRLTDR EWAEEWKHLD HLLNCIMDMV ENSP00000402257/1-615 SHRDLRDRNR PMGLHGTRQE EMIDHRLTDR EWAEEWKHLD HLLNCIMDMV BACU006974/1-606 SHRDLRDRNR PMGLHGTRQE EMIDHRLTDR EWAEEWKHLD HLLNCIMDMV ENSBTAP00000023058/1-579 SHRDLRDRNR PMGLHGTRQE EMIDHRLTDR EWAEEWKHLD HLLNCIMDMV 501 550 ENSTTRP00000016123/1-696 EKTRRSLTVL RRCQEADREE LNYWIRRYSD AEDLKKGGSG SSSHSRQQSP bmy_11697T0/1-399 EKTRRSLTVL RRCQEADREE LNYWIRRYSD AEDLKKGGSG SSSHSRQQSP ENSP00000402257/1-615 EKTRRSLTVL RRCQEADREE LNYWIRRYSD AEDLKKGGGS SSSHSRQQSP BACU006974/1-606 EKTRRSLTVL RRCQEADREE LNYWIRRYSD AEDLKKGGSG SSSHSRQQSP ENSBTAP00000023058/1-579 EKTRRSLTVL RRCQEADREE LNYWIRRYSD AEDLKKGGSS SSSHSRQQSP 551 600 ENSTTRP00000016123/1-696 VNPDPVALDA HREFLHRPAS GYVPEEIWKK A--------- ---------- bmy_11697T0/1-399 VNPDPVALDA HREFLHRPAS GYVPEEIWKK AAYRVICPHY SGNDKKKKSW ENSP00000402257/1-615 VNPDPVALDA HREFLHRPAS GYVPEEIWKK A--------- ---------- BACU006974/1-606 VNPDPVALDA HREFLHRPAS GYVPEEIWKK A--------- ---------- ENSBTAP00000023058/1-579 VNPDPVALDA HREFLHRPAS GYVPEEIWKK A--------- ---------- 601 650 ENSTTRP00000016123/1-696 ---------- --EEAVNEVK RQAMTELQKA VSEAERKAHD MITSERAKME bmy_11697T0/1-399 IFCIFHLQFS LKEEAVNEVK RQAMTELQKA VSEAERKAHD MITSERAKME ENSP00000402257/1-615 ---------- --EEAVNEVK RQAMTELQKA VSEAERKAHD MITTERAKME BACU006974/1-606 ---------- --EEAVNEVK RQAMTELQKA VSEAERKAHD MITSERAKME ENSBTAP00000023058/1-579 ---------- --EEAVNEVK RQAMTELQKA VSEAERKAHD MITSERAKME 651 700 ENSTTRP00000016123/1-696 RTVAEAKRQA AEDALAVINQ QEDSSESCWN CGRKASETCS GCNTARYCGS bmy_11697T0/1-399 RTVAEAKRQA AEDALAVINQ QEDSSESCWN CGRKASETCS GCNTARYCGS ENSP00000402257/1-615 RTVAEAKRQA AEDALAVINQ QEDSSESCWN CGRKASETCS GCNTARYCGS BACU006974/1-606 RTVAEAKRQA AEDALAVINQ QEDSSESCWN CGRKASETCS GCNTARYCGS ENSBTAP00000023058/1-579 RTVAEAKRQA AEDALAVINQ QEDSSESCWN CGRKASETCS GCNTARYCGS 701 750 ENSTTRP00000016123/1-696 FCQHKDWEKH HHICGQTLQA QQQGDTPAVS SSVTPNSGAG SPMDTPPAAT bmy_11697T0/1-399 FCQHKDWEKH HHICGQTLQA QQQGDTPAVS SSVTPNSGAG SPMDTPPAAT ENSP00000402257/1-615 FCQHKDWEKH HHICGQTLQA QQQGDTPAVS SSVTPNSGAG SPMDTPPAAT BACU006974/1-606 FCQHKDWEKH HHICGQTLQA QQQGDTPAVS SSVTPNSGAG SPMDTPPAAT ENSBTAP00000023058/1-579 FCQHKDWEKH HHICGQTLQA QQQGDTPAVS SSVTPNSGAG SPMDTPPAAT 751 800 ENSTTRP00000016123/1-696 PRSTTPGTPS TIETTPR bmy_11697T0/1-399 PRSTTPGTPS TIETTPR ENSP00000402257/1-615 PRSTTPGTPS TIETTPR BACU006974/1-606 PRSTTPGTPS TIETTPR ENSBTAP00000023058/1-579 PRSTTPGTPS TIETTPR