KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:19:40 2014 Check: 00 .. Name: ENSP00000268919/1-673 Len: 684 Check: 2189 Weight: 1.00 Name: ENSBTAP00000023059/1-683 Len: 684 Check: 9792 Weight: 1.00 Name: bmy_17959T0/1-389 Len: 684 Check: 4018 Weight: 1.00 Name: BACU006859/1-216 Len: 684 Check: 9003 Weight: 1.00 // 1 50 ENSP00000268919/1-673 MASQFCLPES PCLSPLKPLK PHFGDIQEGI YVAIQRSDKR IHLAVVTEIN ENSBTAP00000023059/1-683 MASQLFRPLT PRLSSLTPVK PHFGHLQAGI SVAIQRTDGR IHLAVVTEVR bmy_17959T0/1-389 ---------- ---------- ---------- ---------- ---------- BACU006859/1-216 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000268919/1-673 RENYWVTVEW VEKAVKKGKK IDLETILLLN PALDSAEHPM PPPPLSPLAL ENSBTAP00000023059/1-683 RDNAWVTVEW AEKGVKKGKK VALETIFLLN PALALAGPAA QGRASRSVSL bmy_17959T0/1-389 ---------- ---------- ---------- ---------- ---------- BACU006859/1-216 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000268919/1-673 APSSAIRDQR TATKWVAMIP QKNQTASGDS LDVRVPSKPC LMKQKKSPCL ENSBTAP00000023059/1-683 APPSVIGDQR TAARWAGKIP QRNETPSGDS LAVRVPSSPC LMTQRKSACL bmy_17959T0/1-389 ---------- ---------- ---------- ---------- ---------- BACU006859/1-216 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000268919/1-673 WEIQKLQEQR EKRRRLQQEI RARRALDVNT RNPNYEIMHM IEEYRRHLDS ENSBTAP00000023059/1-683 REIEKLQKQR ERRRRLHREI RAQRARDADT GNAHYEIRRL IEECRRRLRG bmy_17959T0/1-389 ---------- ---------- ---------- ---------- ---------- BACU006859/1-216 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000268919/1-673 SKISVLEPPQ EHRICVCVRK RPLNQRETTL KDLDIITVPS DNVVMVHESK ENSBTAP00000023059/1-683 GRISGPEPRD GRRICVCVRK RPLNRQEATR EDLDIVTIPS DNVVMVHESK bmy_17959T0/1-389 ---------- ---------- ---------- ---------- ---------- BACU006859/1-216 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000268919/1-673 QKVDLTRYLQ NQTFCFDHAF DDKASNELVY QFTAQPLVES IFRKGMATCF ENSBTAP00000023059/1-683 QKVDLTRYLE NQTFCFDHAF DDTASNELVY QFTAQPLVES IFRHGMATCF bmy_17959T0/1-389 ---------- ---------- ---------- ---------- -----MATCF BACU006859/1-216 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000268919/1-673 AYGQTGSGKT YTMGGDFSGT AQDCSKGIYA LVAQDVFLLL RNSTYEKLDL ENSBTAP00000023059/1-683 AYGQTGSGKT HTMGGGFSGR DQDCSKGIYA MVAQDVFLLL KTSAYEKLNL bmy_17959T0/1-389 AYGQTGSGKT HTMGGAFSGR DQDCSKGIYA MVAQDVFLLL KTSAYKKLDL BACU006859/1-216 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000268919/1-673 KVYGTFFEIY GGKVYDLLNW KKKLQVLEDG NQQIQVVGLQ EKEVCCVEEV ENSBTAP00000023059/1-683 KVYGTFFEIY GGKVYDLLNW KKKLQVLEDG SQQIQVVGLQ EQEVCCVEDM bmy_17959T0/1-389 KVYGTFFEIY GGKVYDLLNW KKTLQVLEDG SQQIQVVGLQ EQGVCCVEDM BACU006859/1-216 ---------- ---------- ---------- ---------- ---------M 401 450 ENSP00000268919/1-673 LNLVEIGNSC RTSRQTPVNA HSSRSHAVFQ IILKSGRIMH GKFSLVDLAG ENSBTAP00000023059/1-683 LNLVELGNSC RTSGQTSVNA HSSRSHAVFQ IILKSRGKLH GKFSLVDLAG bmy_17959T0/1-389 LNLVELGNSC RTSGQTSVNA HSSRSHAVFQ IILKSRGKLH GKFSLVDLAG BACU006859/1-216 LNLAELGNSC RTSGQTSVNA HSSRSHTVFQ IILKSRGKLH GKFSLVDLAG 451 500 ENSP00000268919/1-673 NERGADTTKA SRKRQLEGAE INKSLLALKE CILALGQNKP HTPFRASKLT ENSBTAP00000023059/1-683 NERGADTAKA NRKRQLEGAE INKSLLALKE CIRALGQNKS HTPFRASKLT bmy_17959T0/1-389 NERGADTAKA NQKRQLEGAK VNKSLLALKE CIRALGQNKS HTPFRASKLT BACU006859/1-216 NERGADTAKA NRKRQLEGAE INKSLLALKE CLRALGQNKF HTPFRASKLT 501 550 ENSP00000268919/1-673 LVLRDSFIGQ NSSTCMIATI SPGMTSCENT LNTLRYANRV KKLNVDVRPY ENSBTAP00000023059/1-683 QVLRDSFIGQ NSSTCMIATI SPGMASCENT LNTLRYANRV KEITLNLRPR bmy_17959T0/1-389 QVLRDSFIGQ NSSTCMIATI SPGMASCENT LNTLRYANRV KEVTLDLRPH BACU006859/1-216 QVLRDSFIGQ NSSTCMIATI YPGMASCENT LNTLRYANRV KEITLDLRPH 551 600 ENSP00000268919/1-673 HRGHYPIGHE APRMLKSHIG NSEMSLQRDE FIKIPYVQSE EQKEIEEVET ENSBTAP00000023059/1-683 HRCLYPAERE MPRVLENHIR NSEMSLQGDE FIRIPCLQSE EEKETEEIKV bmy_17959T0/1-389 HRCLYPAERE VPRMLENHIR NSEMSLQGNE FIKMPCTQSE KEEETKEIKA BACU006859/1-216 HRCLYPTERE VPRMLENHIR NLQMSLQGNE FIKMPCMQSE KEEETKEIKA 601 650 ENSP00000268919/1-673 LPTLLGKDTT ISGKGSSQWL EN-IQERAGG VHHDIDFCIA RSLSILEQKI ENSBTAP00000023059/1-683 LSSPLV-DTT ISWKEASQWP DNKIQDTSDE VNCNVDFCIA QLLSILEKKI bmy_17959T0/1-389 LSSPLMEDTA ISWKESSQRP GNNIQETADG VNCDVDFCIA QLLSXLEQKI BACU006859/1-216 PSFPLMEDTA ISWKE----- ---------- ---------- ---------- 651 700 ENSP00000268919/1-673 DALTEIQKKL KLLLADLHVK SKVE------ ---- ENSBTAP00000023059/1-683 DILTEIRRKL KLLQADLQKE NRHGEVNGER SDLK bmy_17959T0/1-389 GFLTEIQRKL KLLRADLQKK SKYSEANGER SDLK BACU006859/1-216 ---------- ---------- ---------- ----