KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:41 2014 Check: 00 .. Name: ENSP00000311697/1-268 Len: 308 Check: 3253 Weight: 1.00 Name: ENSBTAP00000023064/1-270 Len: 308 Check: 213 Weight: 1.00 Name: ENSTTRP00000008665/1-267 Len: 308 Check: 1669 Weight: 1.00 Name: bmy_05819T0/1-192 Len: 308 Check: 8274 Weight: 1.00 Name: BACU000823/1-270 Len: 308 Check: 9549 Weight: 1.00 // 1 50 ENSP00000311697/1-268 ---------- ---------- ---------- --------MS LSFLLLLFFS ENSBTAP00000023064/1-270 ---------- ---------- ---------- --------MS LSFLLLLFLS ENSTTRP00000008665/1-267 ---------- ---------- ---------- --------MS LSFLLLLFLS bmy_05819T0/1-192 YVHPVRRGGQ RQRHTAARGL QSPEPALQNA PRTPAAGRMS LSFLLLLFLS BACU000823/1-270 ---------- ---------- ---------- --------MS LSFLFLLFLS 51 100 ENSP00000311697/1-268 HLILSAWAHG EKRLAPKGQP GPAATDRNPR GSSSRQSSSS AMSSSS--AS ENSBTAP00000023064/1-270 HLILSAWAQG EKRLAPKGQP GPAATERNPG GASSRRSSSS TATSSSSPAS ENSTTRP00000008665/1-267 HLILSAWAQG EERLAPKGQP GQAATGRNPG GASSSRSSSS TKSSSSSSVS bmy_05819T0/1-192 HLILSAWAQG EKRLAPKGQP GPAATGRNPG GASSSRSSSS TKSSSSSSAS BACU000823/1-270 HLILSAWAQG EKRLAPKGQP GPAATGRNAG GASSSRSSSS TKSSSSSSAS 101 150 ENSP00000311697/1-268 SSPAASLGSQ GSGLEQSSFQ WSPSGRRTGS LYCRVGIGFH LQIYPDGKVN ENSBTAP00000023064/1-270 SSSAASRGGP GSSLEQSSFQ WSPSGRRTGS LYCRVGIGFH LQIYPDGKVN ENSTTRP00000008665/1-267 SSPGAPLGSQ GNGLEQSSFQ WTPSGRRTGS LYCRVGIGFH LQIYPDGKVN bmy_05819T0/1-192 SSPGASLGSQ GSGLEQSSFQ WSPSGRRTGS LYCRVGIGFH LQIYPDGKVN BACU000823/1-270 SSPGASLGSQ GSGLEQSSFQ WSPSGRRTGS LYCRVGIGFH LQIYPDGKVN 151 200 ENSP00000311697/1-268 GSHEANMLSV LEIFAVSQGI VGIRGVFSNK FLAMSKKGKL HASAKFTDDC ENSBTAP00000023064/1-270 GSHEANMLSI LEIFAVSQGI VGIRGVFSNK FLAMSKKGKL HASAKFTDDC ENSTTRP00000008665/1-267 GSHEANMLSI LEIFAVS-GI VGIRGVFSNK FLAMSK--KL HASAKFTDDC bmy_05819T0/1-192 GSHEANTLSI LEIFAVSQGI VGIRGVFSNK FLAMSKKGKL HA-------- BACU000823/1-270 GSHEANTLSI LEIFAVSQGI VGIRGVFSNK FLAMSKKGKL HASAKFTDDC 201 250 ENSP00000311697/1-268 KFRERFQENS YNTYASAIHR TEKTGREWYV ALNKRGKAKR GCSPRVKPQH ENSBTAP00000023064/1-270 KFRERFQENS YNTYASAIHR TEKTGREWYV ALNKRGKAKR GCSPRVKPQH ENSTTRP00000008665/1-267 KFRERFQENS YNTYASAIHR TEKTGREWYV ALNKRGKAKR GCSPRVKPQH bmy_05819T0/1-192 ---------- ---------- ---------- ---------- ---------- BACU000823/1-270 KFRERFQENS YNTYASAIHR TEKTGREWYV ALNKRGKAKR GCSPRVKPQH 251 300 ENSP00000311697/1-268 ISTHFLPRFK QSEQPELSFT VTVPEKKKPP SPIKPKIPLS APRKNTNSVK ENSBTAP00000023064/1-270 VSTHFLPRFK QLEQPELSFT VTVPEKKKPP NPVKPKVPLS APRRSPNTVK ENSTTRP00000008665/1-267 ISTHFLPRFK QSEQPELSFT VTVPEKKKPP NPIKPKVPLS APRRSPNTVK bmy_05819T0/1-192 ---------- ---------- ---------- ---------- ---------- BACU000823/1-270 ISTHFLPRFK QSEQPELSFT VTAPEKKKPP NPIKPKVPLS APRRSPNTVK 301 350 ENSP00000311697/1-268 YRLKFRFG ENSBTAP00000023064/1-270 YRLKFRFG ENSTTRP00000008665/1-267 YRLKFRFG bmy_05819T0/1-192 -------- BACU000823/1-270 YRLKFRFG