KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:44 2014 Check: 00 .. Name: ENSTTRP00000011779/1-183 Len: 327 Check: 2422 Weight: 1.00 Name: ENSBTAP00000023087/1-171 Len: 327 Check: 2873 Weight: 1.00 Name: ENSP00000368572/1-171 Len: 327 Check: 4091 Weight: 1.00 Name: bmy_15354T0/1-301 Len: 327 Check: 8302 Weight: 1.00 Name: BACU011207/1-142 Len: 327 Check: 4985 Weight: 1.00 // 1 50 ENSTTRP00000011779/1-183 EEPPPLTVQV QGLGPQREEK QKKKMAKFVI RPATAADCSD ILRLIKELAK ENSBTAP00000023087/1-171 ---------- ---------- ----MAKFVI RPATAADCSD ILRLIKELAK ENSP00000368572/1-171 ---------- ---------- ----MAKFVI RPATAADCSD ILRLIKELAK bmy_15354T0/1-301 ---------- ---------- ----MAKFVI RPATAADCSD ILRLIKELAK BACU011207/1-142 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011779/1-183 YEYMEEQVIL TEK------- ---------- ---------- ---DLLEDGF ENSBTAP00000023087/1-171 YEYMEEQVML TEK------- ---------- ---------- ---DLLEDGF ENSP00000368572/1-171 YEYMEEQVIL TEK------- ---------- ---------- ---DLLEDGF bmy_15354T0/1-301 YEYMEEQVIL TEKGNASVAG RGTSVRCLPP SSRPTLSLLP LLADLLEDGF BACU011207/1-142 ---MEEQVIL TEK------- ---------- ---------- ---DLLEDGF 101 150 ENSTTRP00000011779/1-183 GEHPFYHCLV AEVPKEHMTP EGNRPLLPEA GETECS---- ---------- ENSBTAP00000023087/1-171 GEHPFYHCLV AEVPKEHLTP EG-------- ---------- ---------- ENSP00000368572/1-171 GEHPFYHCLV AEVPKEHWTP EG-------- ---------- ---------- bmy_15354T0/1-301 GEHPFYHCLV AEVPKEHVTP EGNRPLLPEA GETECCARRS GCSGGLEELF BACU011207/1-142 GEHPFYHCLV AEVPKEHVTP EG-------- ---------- ---------- 151 200 ENSTTRP00000011779/1-183 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023087/1-171 ---------- ---------- ---------- ---------- ---------- ENSP00000368572/1-171 ---------- ---------- ---------- ---------- ---------- bmy_15354T0/1-301 KYQCCGDPEK LGIKSFVVIQ FHKWFLFDPN VTVSSFAMYM ALPCTWMGGE BACU011207/1-142 ---------- ---------- ---------- ---------- ---------- 201 250 ENSTTRP00000011779/1-183 ---------- ---------- ---------- -YFTYDPWIG KLLYLEDFFV ENSBTAP00000023087/1-171 ---------- ---------- --HSIVGFAM YYFTYDPWIG KLLYLEDFFV ENSP00000368572/1-171 ---------- ---------- --HSIVGFAM YYFTYDPWIG KLLYLEDFFV bmy_15354T0/1-301 DYKMARKFNL KPLPPIGITD TRHSIVGFAM YYFTYDPWIG KLLYLEDFFV BACU011207/1-142 ---------- ---------- --HSIVGFAM YYFTYDPWIG KLLYLEDFFV 251 300 ENSTTRP00000011779/1-183 MSDYRGL--- WHRIRNSEES KPGCDEVSLA ACTSWAEWNE PSINFYKRRG ENSBTAP00000023087/1-171 MSDYRGFGIG SEILKKLSQV AMKCRCSSMH FLV--AEWNE PSINFYKRRG ENSP00000368572/1-171 MSDYRGFGIG SEILKNLSQV AMRCRCSSMH FLV--AEWNE PSINFYKRRG bmy_15354T0/1-301 MSDYRGFGIG SEILKNLSQV AMKCRCSSMH FLV--AEWNE PSINFYKRRG BACU011207/1-142 MSDYRGFGIG SEILKNLSQV AMKCRCSSMH FLV--AEWNE PSINFYKRRG 301 350 ENSTTRP00000011779/1-183 ASDLSSEEGW R--------- ------- ENSBTAP00000023087/1-171 ASDLSSEEGW RLFKIDKEYL LKMAAEE ENSP00000368572/1-171 ASDLSSEEGW RLFKIDKEYL LKMATEE bmy_15354T0/1-301 ASDLSSEEGW RLFKIDKEYL LKMAAEE BACU011207/1-142 ASDLSSEEGW RLFKIDKEYL LKMAAEE