KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:57 2014 Check: 00 .. Name: ENSTTRP00000001777/1-499 Len: 545 Check: 9742 Weight: 1.00 Name: ENSP00000371548/1-545 Len: 545 Check: 6565 Weight: 1.00 Name: ENSBTAP00000023124/1-545 Len: 545 Check: 8441 Weight: 1.00 Name: bmy_02067T0/1-545 Len: 545 Check: 6874 Weight: 1.00 Name: BACU002248/1-466 Len: 545 Check: 9190 Weight: 1.00 // 1 50 ENSTTRP00000001777/1-499 ---------- ---------- ---------- ---------- ---KESIICV ENSP00000371548/1-545 MALRRGGCGA LGLLLLLLGA ACLIPRSAQV RRLARCPATC SCTKESIICV ENSBTAP00000023124/1-545 MALRRGGGGP GLLLLLLLGT ACLIPPSAQV RRLVRCPATC SCTKESIICV bmy_02067T0/1-545 MALRRGGGGA PGRLLLLLGA ACLIPPSAQV RRLARCPATC SCTKESIICV BACU002248/1-466 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000001777/1-499 SSS-VP-IVP -DISSLSLVN GTFSEIKDRM FSHLPSLQLL LLNSNSFTVI ENSP00000371548/1-545 GSSWVPRIVP GDISSLSLVN GTFSEIKDRM FSHLPSLQLL LLNSNSFTII ENSBTAP00000023124/1-545 GSSWVPRIVP GDISSLSLVN GTFSEIKDRM FSHLPSLQLL LLNSNSFTVI bmy_02067T0/1-545 GSSWVPRIVP GDISSLSLVN GTFSEIKDRM FSHLPSLQLL LLNSNSFTVI BACU002248/1-466 ---------- ---------- ---------M FSHLPSLQLL LLNSNSFTVI 101 150 ENSTTRP00000001777/1-499 RDDAFAGLFH LEYLFIEGNK IETISRNAFR GLRDLTHLSL ANXXXXXXXX ENSP00000371548/1-545 RDDAFAGLFH LEYLFIEGNK IETISRNAFR GLRDLTHLSL ANNHIKALPR ENSBTAP00000023124/1-545 RDDAFAGLFH LEYLFIEGNK IETISRNAFR GLRDLTHLSL ANNHIKALPR bmy_02067T0/1-545 RDDAFAGLFH LEYLFIEGNK IETISRNAFR GLRDLTHLSL ANNHIKALPR BACU002248/1-466 RDDAFAGLFH LEYLFIEGNK IETISRNAFR GLRDLTHLSL ANNHIKALPR 151 200 ENSTTRP00000001777/1-499 XXXXXXXXXX XXDLRGNKFE CDCKAKWLYL WLKMTNSTVS DVLCIGPPEY ENSP00000371548/1-545 DVFSDLDSLI ELDLRGNKFE CDCKAKWLYL WLKMTNSTVS DVLCIGPPEY ENSBTAP00000023124/1-545 DVFSDLDSLI ELDLRGNKFE CDCKAKWLYL WLKMTNSTVS DVLCIGPPEY bmy_02067T0/1-545 DVFSDLDSLI ELDLRGNKFE CDCKAKWLYL WLKMTNSTVS DVLCIGPPEY BACU002248/1-466 DVFSDLDSLI ELDLRGNKFE CDCKAKWLYL WLKMTNSTVS DVLCIGPPEY 201 250 ENSTTRP00000001777/1-499 QEKKLNDVTS FDYECTTTDF VVHQTLPYQS VSVDTFNSKN DVYVAIAQPS ENSP00000371548/1-545 QEKKLNDVTS FDYECTTTDF VVHQTLPYQS VSVDTFNSKN DVYVAIAQPS ENSBTAP00000023124/1-545 QEKKLNDVTS FDYECTTTDF VVHQTLPYQS VSVDTFNSKN DVYVAIAQPS bmy_02067T0/1-545 QEKKLNDVTS FDYECTTTDF VVHQTLPYQS VSVDTFNSKN DVYVAIAQPS BACU002248/1-466 QEKKLNDVTS FDYECTTTDF VVHQTLPYQS VSVDTFNSKH DVYVAIAQPS 251 300 ENSTTRP00000001777/1-499 MENCMVLEWD HIEMNFRSYD NITGQSIVGC KAILIDDQVF VVVAQLFGGS ENSP00000371548/1-545 MENCMVLEWD HIEMNFRSYD NITGQSIVGC KAILIDDQVF VVVAQLFGGS ENSBTAP00000023124/1-545 MENCMVLEWD HIEMNFRSYD NITGQSIVGC KAILIEDQVF VVVAQLFGGS bmy_02067T0/1-545 MENCMVLEWD HIEMNFRSYD NITGQSIVGC KAILIDDQVF VVVAQLFGGS BACU002248/1-466 MENCMVLEWD HIEMNFRSYD NITGQSIVGC KAILIDDQVF VVVAQLFGGS 301 350 ENSTTRP00000001777/1-499 HIYRYDESWT KFVKFQDIEV SRISKPNDIE LFQIEDETFF VIADSSKAGL ENSP00000371548/1-545 HIYKYDESWT KFVKFQDIEV SRISKPNDIE LFQIDDETFF VIADSSKAGL ENSBTAP00000023124/1-545 HIYRYDESWT KFVKFQDIEV SRISKPNDIE LFQIEDETFF VIADSSKAGL bmy_02067T0/1-545 HIYRYDESWT KFVKFQDIEV SRISKPNDIE LFQIEDEKFF VIADSSKAGL BACU002248/1-466 HIYRYDESWT KFVKFQDIEV SRISKPNDIE LFQIEDEKFF VIADSSKAGL 351 400 ENSTTRP00000001777/1-499 STVYKWNSKG FYSYQSLHEW FRDTDAEFVE IDGKSHLILS SRSQVPIILQ ENSP00000371548/1-545 STVYKWNSKG FYSYQSLHEW FRDTDAEFVD IDGKSHLILS SRSQVPIILQ ENSBTAP00000023124/1-545 STVYKWNSKG FYSYQSLHEW FRDTDAEFVD IDGKSHLILS SRSQVPIILQ bmy_02067T0/1-545 STVYKWNSKG FYSYQSLHEW FRDTDAEFVE IDGKSHLILS SRSQVPIILQ BACU002248/1-466 STVYKWNSKG FYSYQSLHEW FRDTDAEFVE IDGKSHLILS SRSQVPIILQ 401 450 ENSTTRP00000001777/1-499 WNKSSKKFVP HSDIPNMEDV LAVKSFRMQN ALYLSLTRFI GDSRVMRWNS ENSP00000371548/1-545 WNKSSKKFVP HGDIPNMEDV LAVKSFRMQN TLYLSLTRFI GDSRVMRWNS ENSBTAP00000023124/1-545 WNKSSKKFVP HSDIPNMEDV LAVKSFRMQN ALYLSLTRFI GDSRVMRWNS bmy_02067T0/1-545 WNKSSKKFVP HSDIPNMEDV LAVKSFRMQN ALYLSLTRFI GDSRVMRWNS BACU002248/1-466 WNKSSKKFVP HSDIPNMEDV LAVKSFRMQN ALYLSLTRFI GDSRVMRWNS 451 500 ENSTTRP00000001777/1-499 KQFVEVQALP SRGAMTLQPF SFKENHYLAL GSDYTFSQIY QWDKEKQLFK ENSP00000371548/1-545 KQFVEIQALP SRGAMTLQPF SFKDNHYLAL GSDYTFSQIY QWDKEKQLFK ENSBTAP00000023124/1-545 KQFVEIQALP SRGAMTLQPF SFKENHYLAL GSDYTFSQIY QWDKEKQLFK bmy_02067T0/1-545 KQFVEIQALP SRGAMTLQPF SFKENHYLAL GSDYTFSQIY QWDKEKQLFK BACU002248/1-466 KQFVEIQALP SRGAMTLQPF SFKENHYLAL GSDYTFSQIY QWDKEKQLFK 501 550 ENSTTRP00000001777/1-499 KFKEIYVQAP RSFTAVSTDR RDFFFASSFK GKTKIFEHIV VDLSL ENSP00000371548/1-545 KFKEIYVQAP RSFTAVSTDR RDFFFASSFK GKTKIFEHII VDLSL ENSBTAP00000023124/1-545 KFKEIYVQAP RSFTAVSTDR RDFFFASSFK GKTKIFEHIV VDLSL bmy_02067T0/1-545 KFKEIYVQAP RSFTAVSTDR RDFFFASSFK GKTKIFEHIV VDLSL BACU002248/1-466 KFKEIYVQAP RSFTAVSTDR RDFFFASSFK GKTKIFEHII VDLSL