KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:19:59 2014 Check: 00 .. Name: ENSTTRP00000015937/1-729 Len: 825 Check: 7102 Weight: 1.00 Name: ENSP00000329967/1-729 Len: 825 Check: 5014 Weight: 1.00 Name: bmy_20951T0/1-810 Len: 825 Check: 737 Weight: 1.00 Name: ENSBTAP00000023134/1-729 Len: 825 Check: 5475 Weight: 1.00 // 1 50 ENSTTRP00000015937/1-729 ---------- ---------- ---------- -------MQS TSNHLWLLSD ENSP00000329967/1-729 ---------- ---------- ---------- -------MQS TSNHLWLLSD bmy_20951T0/1-810 ALEAGSGLRH REAAGARWRW RGGDRASITR GSPDHAEMQS TSNHLWLLSD ENSBTAP00000023134/1-729 ---------- ---------- ---------- -------MQS TSNHLWLLSD 51 100 ENSTTRP00000015937/1-729 ILGQGATANV FRGRHKKTGD LFAIKVFNNI SFLRPVDVQM REFEVLKKLN ENSP00000329967/1-729 ILGQGATANV FRGRHKKTGD LFAIKVFNNI SFLRPVDVQM REFEVLKKLN bmy_20951T0/1-810 ILGQGATANV FRGRHKKTGD LFAIKVFNNI SFLRPVDVQM REFEVLKKLN ENSBTAP00000023134/1-729 ILGQGATANV FRGRHKKTGD LFAIKVFNNI SFLRPVDVQM REFEVLKKLN 101 150 ENSTTRP00000015937/1-729 HKNIVKLFAI EEEXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000329967/1-729 HKNIVKLFAI EEETTTRHKV LIMEFCPCGS LYTVLEEPSN AYGLPESEFL bmy_20951T0/1-810 HKNIVKLFAI EEEVTTRHKV LIMEFCPCGS LYTVLEEPCN AYGLPESEFL ENSBTAP00000023134/1-729 HKNIVKLFAI EEETTTRHKV LIMEFCPCGS LYTVLEEPSN AYGLPESEFL 151 200 ENSTTRP00000015937/1-729 XXXXXXXGGM NHLRENGIVH RDIKPGNIMR VIGEDGQSVY KLTDFGAARE ENSP00000329967/1-729 IVLRDVVGGM NHLRENGIVH RDIKPGNIMR VIGEDGQSVY KLTDFGAARE bmy_20951T0/1-810 IVLRDVVGGM NHLRENGIVH RDIKPGNIMR VIGEDGQSVY KLTDFGAARE ENSBTAP00000023134/1-729 IVLRDVVGGM NHLRENGIVH RDIKPGNIMR VIGEDGQSVY KLTDFGAARE 201 250 ENSTTRP00000015937/1-729 LEDDEQFVSL YGTEEYLHPD MYERAVLRKD HQKKYGATVD LWSIGVTFYH ENSP00000329967/1-729 LEDDEQFVSL YGTEEYLHPD MYERAVLRKD HQKKYGATVD LWSIGVTFYH bmy_20951T0/1-810 LEDDEQFVSL YGTEEYL--- ---------- --KKYGATVD LWSIGVTFYH ENSBTAP00000023134/1-729 LEDDEQFVSL YGTEEYLHPD MYERAVLRKD HQKKYGATVD LWSIGVTFYH 251 300 ENSTTRP00000015937/1-729 AATGSLPFRP FEGPRRNKEV M--------- ---------- ---------- ENSP00000329967/1-729 AATGSLPFRP FEGPRRNKEV M--------- ---------- ---------- bmy_20951T0/1-810 AATGSLPFRP FEGPRRNKEV INFMVQLTVP LDNMDGKINV FVVNIKMLFY ENSBTAP00000023134/1-729 AATGSLPFRP FEGPRRNKEV M--------- ---------- ---------- 301 350 ENSTTRP00000015937/1-729 ---------- ---------- ---------- YKIITGKPSG AISGVQKAEN ENSP00000329967/1-729 ---------- ---------- ---------- YKIITGKPSG AISGVQKAEN bmy_20951T0/1-810 GTLRAQMKIN YGINKIIVQP LFYFSQSDSK YKIITGKPSG AISGVQKAEN ENSBTAP00000023134/1-729 ---------- ---------- ---------- YKIITGKPSG AISGVQKAEN 351 400 ENSTTRP00000015937/1-729 GPIDWSGDMP VSCSLSRGLQ VLLTPVLANI LEADQEKCWG FDQFFAETSD ENSP00000329967/1-729 GPIDWSGDMP VSCSLSRGLQ VLLTPVLANI LEADQEKCWG FDQFFAETSD bmy_20951T0/1-810 GPIDWSGDMP VSCSLSRGLQ VLLTPVLANI LEADQEKCWG FDQFFAETSD ENSBTAP00000023134/1-729 GPIDWSGDMP VSCSLSRGLQ VLLTPVLANI LEADQEKCWG FDQFFAETSD 401 450 ENSTTRP00000015937/1-729 ILHRMIIHVF SLQQMTAHKI YIHSYNTXXX XXXXXXXXXX XXXSNQELIY ENSP00000329967/1-729 ILHRMVIHVF SLQQMTAHKI YIHSYNTATI FHELVYKQTK IISSNQELIY bmy_20951T0/1-810 ILHRMIIHVF SLQQMTAHKI YIHGYNTATV FHELVYKQTK IISSNQELIY ENSBTAP00000023134/1-729 ILHRMIVHVF SLQQMTAHKV YIHGYNTATV FHELVYKQTK IISSNQELIY 451 500 ENSTTRP00000015937/1-729 EGRRLVLEPG RLAQHFPKTA DENPIFVVSR EPLSTIGLIY EKISLPKVHP ENSP00000329967/1-729 EGRRLVLEPG RLAQHFPKTT EENPIFVVSR EPLNTIGLIY EKISLPKVHP bmy_20951T0/1-810 EGRRLVLEPG RLAQHFPKTT EENPIFVVSR EPLSTIGLIY EKISLPKVHP ENSBTAP00000023134/1-729 EGRRLVLEPG RLAQHFPKTS EENPIFVVSR EPLSTIGLIY EKISLPKVHP 501 550 ENSTTRP00000015937/1-729 RYDLDGDASM AKAVTGVVCY ACRIASTLLL YQELMRKGIR WLIELVKDDY ENSP00000329967/1-729 RYDLDGDASM AKAITGVVCY ACRIASTLLL YQELMRKGIR WLIELIKDDY bmy_20951T0/1-810 RYDLDGDASM AKAVTGVVCY ACRIASTLLL YQELMRKGIR WLIELVKDDY ENSBTAP00000023134/1-729 RYDLDGDASM AKAMTGVVCY ACRIASTLLL YQELVRKGIR WLIELVKDDY 551 600 ENSTTRP00000015937/1-729 NETVHKKTEV VITLDFCIRN IEKTVKVYEK LMKINLEAAE LGEISDIHTK ENSP00000329967/1-729 NETVHKKTEV VITLDFCIRN IEKTVKVYEK LMKINLEAAE LGEISDIHTK bmy_20951T0/1-810 NETVHKKTEV VITLDFCIRN IEKTVKVYEK LMKINLEAAE LGEISDIHTK ENSBTAP00000023134/1-729 NETVHKKTEV VITLDFCIRN IEKTVKVYEK LMKINLEAAE LGEISDIHTK 601 650 ENSTTRP00000015937/1-729 LLRLSSSQGT IETSLQDIES KLSPGGLLAD TWTHQEGTHP KDRHVEKLQV ENSP00000329967/1-729 LLRLSSSQGT IETSLQDIDS RLSPGGSLAD AWAHQEGTHP KDRNVEKLQV bmy_20951T0/1-810 LLRLSSSQGT IETSLXDIES KLSPGGLLAD TWTHQEGTHP KDRHIEKLQV ENSBTAP00000023134/1-729 LLRLSSSQGT IETSLQDIES KLSPGGLLAD TWTHQEGTHP KDRHVEKLQV 651 700 ENSTTRP00000015937/1-729 LLNCITEIYY QFKKDKAERR LAYNEEQIHK FDKQKLYYHA TKAMTHFTDE ENSP00000329967/1-729 LLNCMTEIYY QFKKDKAERR LAYNEEQIHK FDKQKLYYHA TKAMTHFTDE bmy_20951T0/1-810 LLNCITEIYY QFKKDKAERR LAYNEEQIHK FDKQKLYYHA TKAMTHFTDE ENSBTAP00000023134/1-729 LLNCITEIYY QFKKDKAERR LAYNEEQIHK FDKQKLYYHA TKAMTHFTDE 701 750 ENSTTRP00000015937/1-729 CVKKYEAFLD KSEEWMRKML HLRKQLLSLT NQCFDIEEEV SKYQDYTNEL ENSP00000329967/1-729 CVKKYEAFLN KSEEWIRKML HLRKQLLSLT NQCFDIEEEV SKYQEYTNEL bmy_20951T0/1-810 CVKKYEAFLD KSEEWMRKML HLRKQLLSLT NQCFDIEEEV SKYQDYTNEL ENSBTAP00000023134/1-729 CVKKYEAFLD KSEEWMRKML HLRKQLLSLT NQCFDIEEEV SKYQEYTNEL 751 800 ENSTTRP00000015937/1-729 QETLPQKMFA ASSGIKHTMT PIYPCSNTLV EMTLGMKKLK EEMEGVVKEL ENSP00000329967/1-729 QETLPQKMFT ASSGIKHTMT PIYPSSNTLV EMTLGMKKLK EEMEGVVKEL bmy_20951T0/1-810 QETLPQKMFA ASSGIKHTMT PIYPCSNTLV EMTLGMKKLK EEMEGVVKEL ENSBTAP00000023134/1-729 QETLPQKMFA ASSGIKHTMT PIYPCSNTLV EMTLGMKKLK EEMEGVVKEL 801 850 ENSTTRP00000015937/1-729 AENNHILERF GSLTMDGGLR NVDCL ENSP00000329967/1-729 AENNHILERF GSLTMDGGLR NVDCL bmy_20951T0/1-810 AENNHILERF GSLTMDGGLR NVDCL ENSBTAP00000023134/1-729 AENNHILERF GSLTMDGGLR NVDCL