KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:19:59 2014 Check: 00 .. Name: ENSBTAP00000023144/1-445 Len: 541 Check: 6617 Weight: 1.00 Name: bmy_19386T0/1-535 Len: 541 Check: 1972 Weight: 1.00 Name: BACU013826/1-535 Len: 541 Check: 1972 Weight: 1.00 Name: ENSTTRP00000014013/1-535 Len: 541 Check: 1856 Weight: 1.00 Name: ENSP00000381034/1-535 Len: 541 Check: 5702 Weight: 1.00 // 1 50 ENSBTAP00000023144/1-445 MKKISLKTFR KSFNLSKSKE DAEFMVVQQP ALAGDFGKEE SLFGSCYGKE bmy_19386T0/1-535 MKKISLKTFR KSFNLNKSKE EADFMVVQQP SLASDFGKED SLFGSCYGKD BACU013826/1-535 MKKISLKTFR KSFNLNKSKE EADFMVVQQP SLASDFGKED SLFGSCYGKD ENSTTRP00000014013/1-535 MKKISLKTFR KSFNLNKSKE EADFMVVQQP SLASDFGKED SLFGSCYGKD ENSP00000381034/1-535 MKKISLKTLR KSFNLNKSKE ETDFMVVQQP SLASDFGKDD SLFGSCYGKD 51 100 ENSBTAP00000023144/1-445 MAGCELHGED EKGGGGKNRA KSESLMGTLK RRLSAKQKAK GKGGAAAGGA bmy_19386T0/1-535 IASCDLNSED EK--GGKSRS KSESLMGTLK RRLSAKQKPK GKGGAPSGGS BACU013826/1-535 IASCDLNSED EK--GGKSRS KSESLMGTLK RRLSAKQKPK GKGGAPSGGS ENSTTRP00000014013/1-535 IASCDLNSED EK--GGKSRS KSESLMGTLK RRLSAKQKPK GKGGAPSGGS ENSP00000381034/1-535 MASCDINGED EK--GGKNRS KSESLMGTLK RRLSAKQKSK GKAGTPSGSS 101 150 ENSBTAP00000023144/1-445 ADEDTFSSSS APLVFKDARA PRPMRSTSLR SHHYSPTPWP LRPTASEETC bmy_19386T0/1-535 ADEDTFSSSS APIVFKDVRA QRPMRSTSLR SHHYSPTPWP LRPTTSEETC BACU013826/1-535 ADEDTFSSSS APIVFKDVRA QRPMRSTSLR SHHYSPTPWP LRPTTSEETC ENSTTRP00000014013/1-535 ADEDTFSSSS APIVFKDVRA QRPMRSTSLR SHHYSPTPWP LRPTASEETC ENSP00000381034/1-535 ADEDTFSSSS APIVFKDVRA QRPIRSTSLR SHHYSPAPWP LRPTNSEETC 151 200 ENSBTAP00000023144/1-445 IRMEVRVKAL VHSPGTGPAL NGVRKDFGEL RPAAEPACPC PEPPAAPGSP bmy_19386T0/1-535 IKMEVRVKAL VHSPGPGPAL NGVRKDFHDL QADT----AC QEQTNSLKSS BACU013826/1-535 IKMEVRVKAL VHSPGPGPAL NGVRKDFHDL QADT----AC QEQTNSLKSS ENSTTRP00000014013/1-535 IKMEVRVKAL VHSPGPGPAL NGVRKDFHDL QADT----AC QEQTNSLKSS ENSP00000381034/1-535 IKMEVRVKAL VHSSSPSPAL NGVRKDFHDL QSET----TC QEQANSLKSS 201 250 ENSBTAP00000023144/1-445 APVAGDLRLR LGEHVPVVLG LLPQDYLPYT VP-------- -------LDG bmy_19386T0/1-535 ESQDGDLHLH LEEHVPVVIG LVPQDYIQYT VPLEEGMYPL EGPRGYCLDG BACU013826/1-535 ESQDGDLHLH LEEHVPVVIG LVPQDYIQYT VPLEEGMYPL EGPRGYCLDG ENSTTRP00000014013/1-535 ESQDGDLHLH LEEHVPVVIG LVPQDYIQYT VPLEEGMYPL EGPRGYCLDG ENSP00000381034/1-535 ASHNGDLHLH LDEHVPVVIG LMPQDYIQYT VPLDEGMYPL EGSRSYCLDS 251 300 ENSBTAP00000023144/1-445 SSPMX----- ---------- ---------- ---------- ---------- bmy_19386T0/1-535 SSPMEVSAVP PPGGGGSFPE DENQVDPDLV VAPEIFVDQS VNGLLIGTTG BACU013826/1-535 SSPMEVSAVP PPGGGGSFPE DENQVDPDLV VAPEIFVDQS VNGLLIGTTG ENSTTRP00000014013/1-535 SSPMEVSAVP PPVGGGSFPE DENQVDPDLV VAPEIFVDQS VNGLLIGTTG ENSP00000381034/1-535 SSPMEVSAVP PQVGGRAFPE DESQVDQDLV VAPEIFVDQS VNGLLIGTTG 301 350 ENSBTAP00000023144/1-445 ---------- ---------- ---------- ------GPDA HAADSVRCHL bmy_19386T0/1-535 VVLQSPRASP DDAPPLSPLL PPLQTNQIQR NFGGLAGSDA HVAESMRCHL BACU013826/1-535 VVLQSPRASP DDAPPLSPLL PPLQTNQIQR NFGGLAGSDA HVAESMRCHL ENSTTRP00000014013/1-535 VVLQSPRASP DDAPPLSPLL PPLQTNQIQR NFGGLAGSDA HVAESMRCHL ENSP00000381034/1-535 VMLQSPRAGH DDVPPLSPLL PPMQNNQIQR NFSGLTGTEA HVAESMRCHL 351 400 ENSBTAP00000023144/1-445 NFDPTSAPGV ARVYDSVQSS GPLAVTSLTE ELKKLAKQGW YWGPITRWEA bmy_19386T0/1-535 NFDPNSAPGV ARVYDSVQSS GPMVVTSLTE ELKKLAKQGW YWGPITRWEA BACU013826/1-535 NFDPNSAPGV ARVYDSVQSS GPMVVTSLTE ELKKLAKQGW YWGPITRWEA ENSTTRP00000014013/1-535 NFDPNSAPGV ARVYDSVQSS GPMVVTSLTE ELKKLAKQGW YWGPITRWEA ENSP00000381034/1-535 NFDPNSAPGV ARVYDSVQSS GPMVVTSLTE ELKKLAKQGW YWGPITRWEA 401 450 ENSBTAP00000023144/1-445 EGKLANVPDG SFLVRDSSDD RYLLSLSFRS HGKTLHTRIE HSNGRFSFYE bmy_19386T0/1-535 EGKLANVPDG SFLVRDSSDD RYLLSLSFRS HGKTLHTRIE HSNGRFSFYE BACU013826/1-535 EGKLANVPDG SFLVRDSSDD RYLLSLSFRS HGKTLHTRIE HSNGRFSFYE ENSTTRP00000014013/1-535 EGKLANVPDG SFLVRDSSDD RYLLSLSFRS HGKTLHTRIE HSNGRFSFYE ENSP00000381034/1-535 EGKLANVPDG SFLVRDSSDD RYLLSLSFRS HGKTLHTRIE HSNGRFSFYE 451 500 ENSBTAP00000023144/1-445 QPDVEGHTSI VDLIEHSIRD SENGAFCYSR SRLPGSATYP VRLTNPVSRF bmy_19386T0/1-535 QPDVEGHTSI VDLIEHSVRD SENGAFCYSR SRLPGSATYP VRLTNPVSRF BACU013826/1-535 QPDVEGHTSI VDLIEHSVRD SENGAFCYSR SRLPGSATYP VRLTNPVSRF ENSTTRP00000014013/1-535 QPDVEGHTSI VDLIEHSVRD SENGAFCYSR SRLPGSATYP VRLTNPVSRF ENSP00000381034/1-535 QPDVEGHTSI VDLIEHSIRD SENGAFCYSR SRLPGSATYP VRLTNPVSRF 501 550 ENSBTAP00000023144/1-445 MQVRSLQYLC RFVIRQYTRI DLIQKLPLPN KMKDYLQEKH Y bmy_19386T0/1-535 MQVRSLQYLC RFVIRQYTRI DLIQKLPLPN KMKDYLQEKH Y BACU013826/1-535 MQVRSLQYLC RFVIRQYTRI DLIQKLPLPN KMKDYLQEKH Y ENSTTRP00000014013/1-535 MQVRSLQYLC RFVIRQYTRI DLIQKLPLPN KMKDYLQEKH Y ENSP00000381034/1-535 MQVRSLQYLC RFVIRQYTRI DLIQKLPLPN KMKDYLQEKH Y