KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:00 2014 Check: 00 .. Name: BACU012269/1-510 Len: 564 Check: 2636 Weight: 1.00 Name: bmy_07625T0/1-477 Len: 564 Check: 5213 Weight: 1.00 Name: ENSP00000334373/1-521 Len: 564 Check: 3844 Weight: 1.00 Name: ENSTTRP00000000071/1-498 Len: 564 Check: 5731 Weight: 1.00 Name: ENSBTAP00000023150/1-521 Len: 564 Check: 3538 Weight: 1.00 // 1 50 BACU012269/1-510 ---------- ---------- ----MRRQRN EVVVELRKNK RDEHLLKRRN bmy_07625T0/1-477 MADNEKLDNQ RLKNFKNKGR DLE------- --------NK RDEHLLKRRN ENSP00000334373/1-521 MADNEKLDNQ RLKNFKNKGR DLETMRRQRN EVVVELRKNK RDEHLLKRRN ENSTTRP00000000071/1-498 ---------- ---------- ---TMRRQRN EVVVELRKNK RDEHLLKRRN ENSBTAP00000023150/1-521 MADNEKLDNQ RLKNFKNKGR DLETMRRQRN EVVVELRKNK RDEHLLKRRN 51 100 BACU012269/1-510 VPHEDICEDS DIDGDYRVQN TSLEAIVQNA SSDNQGIQLS AVQAARKLLS bmy_07625T0/1-477 VPHEDICEDS DIDGDYRVQN TSLEAIVQNA SSDNQGIQLS AVQAARKLLS ENSP00000334373/1-521 VPHEDICEDS DIDGDYRVQN TSLEAIVQNA SSDNQGIQLS AVQAARKLLS ENSTTRP00000000071/1-498 VPHEDICEDS DIDGDYRVQN TSLEAIVQNA SSDNQGIQLS AVQAARKLLS ENSBTAP00000023150/1-521 VPHEDICEDS DIDGDYRVQN TSLEAIVQNA SSDNQGIQLS AVQAARKLLS 101 150 BACU012269/1-510 SDRNPPIDDL IKSGILPILV HCLERDDNPS LQFEAAWALT NIASGTSEQT bmy_07625T0/1-477 SDRNPPIDDL IKSGILPILV HCLERDDNPS LQFEAAWALT NIASGTSEQT ENSP00000334373/1-521 SDRNPPIDDL IKSGILPILV HCLERDDNPS LQFEAAWALT NIASGTSEQT ENSTTRP00000000071/1-498 SDRNPPIDDL IKSGILPILV HCLERDDNPS LQFEAAWALT NIASGTSEQT ENSBTAP00000023150/1-521 SDRNPPIDDL IKSGILPILV HCLERDDNPS LQFEAAWALT NIASGTSEQT 151 200 BACU012269/1-510 QAVVQSS--- ---------- ---------- ------DGPQ CRDYVISLGV bmy_07625T0/1-477 QAVVQSS--- ---------- ---------- ------DGPQ CRDYVISLGV ENSP00000334373/1-521 QAVVQSNAVP LFLRLLHSPH QNVCEQAVWA LGNIIGDGPQ CRDYVISLGV ENSTTRP00000000071/1-498 QAVVQSNAVP LFLRLLHSPH QNVCEQAVWA LGNIIGDGPQ CRDYVISLGV ENSBTAP00000023150/1-521 QAVVQSNAVP LFLRLLHSPH QNVCEQAVWA LGNIIGDGPQ CRDYVISLGV 201 250 BACU012269/1-510 VKPLLSFISP SIPITFLRNV TWVMVNLCRH KDPPPPMETI QEILPALCVL bmy_07625T0/1-477 VKPLLSFISP SIPITFLRNV TWVMVNLCRH KDPPPPMETI QEILPALCVL ENSP00000334373/1-521 VKPLLSFISP SIPITFLRNV TWVMVNLCRH KDPPPPMETI QEILPALCVL ENSTTRP00000000071/1-498 VKPLLSFISP SIPITFLRNV TWVMVNLCRH KDPPPPMETI QEILPALCVL ENSBTAP00000023150/1-521 VKPLLSFISP SIPITFLRNV TWVMVNLCRH KDPPPPMETI QEILPALCVL 251 300 BACU012269/1-510 IHHTDVNILV DTVWALSYLT DAGNEQIQMV IDSGIVPHLV PLLSHQEVKV bmy_07625T0/1-477 IHHTDVNILV DTVWALSYLT DAGNEQIQMV IDSGIVPHLV PLLSHQEVKV ENSP00000334373/1-521 IHHTDVNILV DTVWALSYLT DAGNEQIQMV IDSGIVPHLV PLLSHQEVKV ENSTTRP00000000071/1-498 IHHTDVNILV DTVWALSYLT DAGNEQIQMV IDSGIVPHLV PLLSHQEVKV ENSBTAP00000023150/1-521 IHHTDVNILV DTVWALSYLT DAGNEQIQMV IDSGIVPHLV PLLSHQEVKV 301 350 BACU012269/1-510 QTAALRAVGN IVTGTDEQTQ VVLNCDALSH FPALLTHPKE KINKEAVWFL bmy_07625T0/1-477 QTAALRAVGN IVTGTDEQTQ VVLNCDALSH FPALLTHPKE KINKEAVWFL ENSP00000334373/1-521 QTAALRAVGN IVTGTDEQTQ VVLNCDALSH FPALLTHPKE KINKEAVWFL ENSTTRP00000000071/1-498 QTAALRAVGN IVTGTDEQTQ VVLNCDALSH FPALLTHPKE KINKEAVWFL ENSBTAP00000023150/1-521 QTAALRAVGN IVTGTDEQTQ VVLNCDALSH FPALLTHPKE KINKEAVWFL 351 400 BACU012269/1-510 SNITAGNQQQ VQAVIDANLV PMIIHLLDKG DFGTQKEAAW AISNLTISGR bmy_07625T0/1-477 SNITAGNQQQ VQAVIDANLV PMIIHLLDKG DFGTQKEAAW AISNLTISGR ENSP00000334373/1-521 SNITAGNQQQ VQAVIDANLV PMIIHLLDKG DFGTQKEAAW AISNLTISGR ENSTTRP00000000071/1-498 SNITAGNQQQ VQAVIDANLV PMIIHLLDKG DFGTQKEAAW AISNLTISGR ENSBTAP00000023150/1-521 SNITAGNQQQ VQAVIDANLV PMIIHLLDKG DFGTQKEAAW AISNLTISGR 401 450 BACU012269/1-510 KDQVAYLIQQ NVIPPFCNLL TVKDAQVVQV VLDGLSNILK MAEDEAETIA bmy_07625T0/1-477 KDQVAYLIQQ NVIPPFCNLL TVKDAQVVQV VLDGLSNILK MAEDEAETIA ENSP00000334373/1-521 KDQVAYLIQQ NVIPPFCNLL TVKDAQVVQV VLDGLSNILK MAEDEAETIG ENSTTRP00000000071/1-498 KDQVAYLIQQ NVIPPFCNLL TVKDAQVVQV VLDGLSNILK MAEDEAETIA ENSBTAP00000023150/1-521 KDQVAYLIQQ NVIPPFCNLL TVKDAQVVQV VLDGLSNILK MAEDEAETIA 451 500 BACU012269/1-510 NLIEECGGLE KIEQLQNHEN EDIYKLAYEI IDQFFSSDDV FNNFIIFLVL bmy_07625T0/1-477 NLIEECGGLE KIEQLQNHEN EDIYKLAYEI IDQFFSSDDI ---------- ENSP00000334373/1-521 NLIEECGGLE KIEQLQNHEN EDIYKLAYEI IDQFFSSDDI ---------- ENSTTRP00000000071/1-498 NLIEECGGLE KIEQLQNHEN EDIYKLAYEI IDQFFSSDDI ---------- ENSBTAP00000023150/1-521 NLIEECGGLE KIEQLQNHEN EDIYKLAYEI IDQFFSSDDI ---------- 501 550 BACU012269/1-510 CINISLDEIL KKILALFQRQ YKVVVEYRAV FKCYLFSNFV FYEN-DMETS bmy_07625T0/1-477 ------DEDP SLVPEAIQG- ---------- ------GTFG FNSSTNVPTE ENSP00000334373/1-521 ------DEDP SLVPEAIQG- ---------- ------GTFG FNSSANVPTE ENSTTRP00000000071/1-498 ------DEDP SLVPEAIQG- ---------- ------GTFG FNSSANVPTE ENSBTAP00000023150/1-521 ------DEDP SLVPEAIQG- ---------- ------GTFG FNSSANVPTE 551 600 BACU012269/1-510 KMEFGAYVLL NKDR bmy_07625T0/1-477 GFQF------ ---- ENSP00000334373/1-521 GFQF------ ---- ENSTTRP00000000071/1-498 GFQF------ ---- ENSBTAP00000023150/1-521 GFQF------ ----