KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:00 2014 Check: 00 .. Name: ENSP00000260649/1-685 Len: 711 Check: 7485 Weight: 1.00 Name: ENSTTRP00000001182/1-675 Len: 711 Check: 3327 Weight: 1.00 Name: ENSBTAP00000023161/1-685 Len: 711 Check: 6625 Weight: 1.00 Name: bmy_00338T0/1-388 Len: 711 Check: 1742 Weight: 1.00 Name: BACU013907/1-711 Len: 711 Check: 3476 Weight: 1.00 // 1 50 ENSP00000260649/1-685 MAEDKSKRDS IEMSMKGCQT NNGFVHNEDI LEQTPDPGSS TDNLKHSTRG ENSTTRP00000001182/1-675 MAEDKGKRDS IGMSMKGGRT NNGFVQNEDI LETDPDPGSP EDSPQHNAVD ENSBTAP00000023161/1-685 MAEDKSKRDS IGLNAKEGQT NNGFVQNEDI RETDLDPSSP VVGPQHNTVD bmy_00338T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU013907/1-711 MAEDKGKRDS VGMSMKGGQT NNGFVQNEDI LETDPEPGSP EDGPQHNAVD 51 100 ENSP00000260649/1-685 ILGSQEPDFK GVQPYAGMPK EVLFQFSGQA RYRIPREILF WLTVASVLVL ENSTTRP00000001182/1-675 IFGPAEPDLK DVRPYAGMPK EVLFRFSGQA RYRVPREILF WLTVASVLVL ENSBTAP00000023161/1-685 ILGPGEPDVK DVRPYAGMPK EVLFQFSGQA CYRIPREVLF WLTVASVLVL bmy_00338T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU013907/1-711 IFGPAGPEWK DVRPYAGMPK EVLFRFSRQA RYRVPREVLF WLTVASVLVL 101 150 ENSP00000260649/1-685 IAATIAIIAL SPKCLDWWQE GPMYQIYPRS FKDSNKDGNG DLKGIQDKLD ENSTTRP00000001182/1-675 TGATIGIIAI SPKCLDWWQA GPMYRIYPRS FKDSDKDGNG DLKGIQDKLD ENSBTAP00000023161/1-685 IAATIAIIAI SPKCLDWWQA GPMYQIYPRS FRDSNKDGDG DLKGIQDKLD bmy_00338T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU013907/1-711 IAATIAIIAV SPKCLDWWQA GPMYRIYPRS FKDSDKDGNG DLKGIQDKLD 151 200 ENSP00000260649/1-685 YITALNIKTV WITSFYKSSL KDFRYGVEDF REVDPIFGTM EDFENLVAAI ENSTTRP00000001182/1-675 YITTLNIKTV WITSFYKSSL KD-SHGV-DF REFDP----- --FETKKIEI ENSBTAP00000023161/1-685 YITTLNIKTV WITSFYKSSL KDFRHGVEDF REIDPIFGTM KDFENLVAAI bmy_00338T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU013907/1-711 YITTLNIKTV WITSFYKSSL KDFRHGIEDF REIDPIFGTM KNFENLVAAI 201 250 ENSP00000260649/1-685 HDKGLKLIID FIPNHTSDKH IWFQLSRTRT GKYTDYYIWH DCTHENGKTI ENSTTRP00000001182/1-675 RAAIHLKIID FIPNHTSDKH AWFQWSRNRT GKYTDYYIWH DCTRANG-TI ENSBTAP00000023161/1-685 HDKGLKLIID FIPNHTSDKH AWFQWSRNQT GKYTDYYIWH DCNRENGTTI bmy_00338T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU013907/1-711 HDKGLKLIID FIPNHTSDKH AWFQWSRNRT GKYTDYYIWH DCTRENGKTI 251 300 ENSP00000260649/1-685 PPNNWLSVYG NSSWHFDEVR NQCYFHQFMK EQPDLNFRNP DVQEEIK--- ENSTTRP00000001182/1-675 PPNNWLSVYG NSSWHFDEVR NQCYFHQFTK EQPDLNFRNP DVQEEIK--- ENSBTAP00000023161/1-685 PPNNWLSVYG NSSWHFDEVR KQCYFHQFMK EQPDLNFRNP DVQEEIK--- bmy_00338T0/1-388 ---------- ---------- ---------- ---------- ---------- BACU013907/1-711 PPNNWLSVYG NSSWHFDEVR NQCYFHQFMK EQPDLNFRNP DVQEEIKVNG 301 350 ENSP00000260649/1-685 ---------- ---------- ---EILRFWL TKGVDGFSLD AVKFLLEAKH ENSTTRP00000001182/1-675 ---------- ---------- ---EIIQFWL SKGVDGFSFD AVQFLLEAKH ENSBTAP00000023161/1-685 ---------- ---------- ---EIIQFWL SKGVDGFSFD ALPFLLEAKH bmy_00338T0/1-388 ---------- ---------- ---EIIQFWL SKGVDGFSFD AVQFLLEAKH BACU013907/1-711 PSNFSHLKRK GLPRGFENLD ISTEIIQFWL SKGVDGFSFD AVQFLLEAKH 351 400 ENSP00000260649/1-685 LRDEIQVNKT QIPDTVTQYS ELYHDFTTTQ VGMHDIVRSF RQTMDQYSTE ENSTTRP00000001182/1-675 LRDEAQVNKN QIPDTVTHYS ELYHDFTTTQ VGMHDIVRSF RQTMDQYSRE ENSBTAP00000023161/1-685 LRDEAQVNKT QIPDMVTHYS QLHHDFTTTQ VGMHDIVRSF RQTMNQYSRE bmy_00338T0/1-388 LRDEAQVNKT QIPDTVTHYS ELYHDFTTTQ VGMHDIVRSF RQTMDQYSRE BACU013907/1-711 LRDEAQVNKT QIPDTVTHYS ELYHDFTTTQ VGMHDIVRSF RQTMDQYSRE 401 450 ENSP00000260649/1-685 PGRYRFMGTE AYAESIDRTV MYYGLPFIQE ADFPFNNYLS MLDTVSGNSV ENSTTRP00000001182/1-675 PGRYRFMGIE AHGENIAKTM MYYGLPFIQE ADFPFNSYLG KLDMPSGNSV ENSBTAP00000023161/1-685 PGRYRFMGTE AHGESITKTM VYYGLPFIQE ADFPFNSYLS KLDKPSGNSV bmy_00338T0/1-388 PGRYRFMGTE AHGENIAKTM MYYGLPFIQE ADFPFNSYLG NLDMPSGNSV BACU013907/1-711 PGRYRFMGTE AHGENIAKTM MYYGLPFIQE ADFPFNSYLG KLDMPSGNSV 451 500 ENSP00000260649/1-685 YEVITSWMEN MPEGKWPNWM IGGPDSSRLT SRLGNQYVNV MNMLLFTLPG ENSTTRP00000001182/1-675 FEVITSWMEN MPEGKWPNWM XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000023161/1-685 SEIITSWMEN MPEGKWPNWM TGGPDSVRLT SRLGEKYVNI MNMLVFTLPG bmy_00338T0/1-388 FEVITSWMEN MPEGKWPNWM TGGPDNVRLT SRLGKQYVNI MNMLVFTLPG BACU013907/1-711 FEVITSWMEN MPEGKWPNWM TGGPDNDRLT SRLGKQYVNI MNMLVFTLPG 501 550 ENSP00000260649/1-685 TPITYYGEEI GMGNIVAANL NESYDINTLR SKSPMQWDNS SNAGFSEASN ENSTTRP00000001182/1-675 XXXXXXXXXX XXXXXXXXXX XXXXXXDTLL SKSPMQWDNS SNAGFSEGNH ENSBTAP00000023161/1-685 TPITYYGEEI GMRNILAANL NETYDAGTLF SKSPMQWDNS SNAGFSEGNH bmy_00338T0/1-388 TPITYYGEEI GMRNILATNL NETYDVDTLL SKSPMQWDNS SNAGFSEGNH BACU013907/1-711 TPITYYGEEI GMRNILATNL NETYDVDTLL SKSPMQWDNS SNAGFSEGNH 551 600 ENSP00000260649/1-685 TWLPTNSDYH TVNVDVQKTQ PRSALKLYQD LSLLHANELL LNRGWFCHLR ENSTTRP00000001182/1-675 TWLPTSSDYH TVNVDVQKTQ PRSALKLYQE LSLLHANELL LSRGWFCYLR ENSBTAP00000023161/1-685 TWLPTSSDYH TVNVDVQKTQ PRSALKLYQE LSLLHANELL LGRGWFCFLG bmy_00338T0/1-388 TWLPTSSDYH TVNVDVQKTQ PRSALKLYQE LSLLHANELL LSRGWFCYLR BACU013907/1-711 TWLPTSSDYH TVNVDVQKTQ PRSALKLYQE LSLLHANELL LSRGWFCYLR 601 650 ENSP00000260649/1-685 NDSHYVVYTR ELDGIDRIFI VVLNFGESTL LNLHNMISGL PAKMRIRLST ENSTTRP00000001182/1-675 NDNHSVVYTR ELDGIDRVFL MVLNFGELSP LNLKEMISDI PTRVRIRLST ENSBTAP00000023161/1-685 NYNHSIMYTR ELDGINRIFL MVLNFGESSV LNLKEMISNI PTRVRIRLST bmy_00338T0/1-388 NDNHSVVYTR ELDGTDRVFL MVLNFGELSL LNLKEMISNI PTRVRIRLST BACU013907/1-711 NDNHFVVYTR ELDGTDRVFL MVLNFGELSV LNLKEMISNI PTRVRIRLST 651 700 ENSP00000260649/1-685 NSADKGSKVD TSGIFLDKGE GLIFEHNTKN LLHRQTAFRD RCFVSNRACY ENSTTRP00000001182/1-675 NSAYKGREVD THAITLDKGE GLILEYNTRN LLHHQTAFQD RCFVSNRACY ENSBTAP00000023161/1-685 NSAYGGREVD THAVTLASGE GLILEYNTRN LLHRQTAFKE RCFVSNRACY bmy_00338T0/1-388 NSAYKGREVD THAITLDKGE GLILEYNTRN LLHHQTAFQD RCFVSNRACY BACU013907/1-711 NSAYKGREVD THAITLDKGE GLILEYNTRN LLHHQTAFQD RCFVSNRACY 701 750 ENSP00000260649/1-685 SSVLNILYTS C ENSTTRP00000001182/1-675 SSVLNILYSL C ENSBTAP00000023161/1-685 SRVLNILYSL C bmy_00338T0/1-388 SSVLNILYSL C BACU013907/1-711 SSVLNILYSL C