KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:01 2014 Check: 00 .. Name: ENSP00000238788/1-689 Len: 787 Check: 3931 Weight: 1.00 Name: ENSBTAP00000023162/1-687 Len: 787 Check: 900 Weight: 1.00 Name: BACU014540/1-645 Len: 787 Check: 5666 Weight: 1.00 Name: ENSTTRP00000004821/1-687 Len: 787 Check: 1422 Weight: 1.00 Name: bmy_01068T0/1-783 Len: 787 Check: 3224 Weight: 1.00 // 1 50 ENSP00000238788/1-689 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023162/1-687 ---------- ---------- ---------- ---------- ---------- BACU014540/1-645 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004821/1-687 ---------- ---------- ---------- ---------- ---------- bmy_01068T0/1-783 PDANPTPRVG EPGKHERLQV PGRLAGGVTR REALRGDVAE RCASAPDRKA 51 100 ENSP00000238788/1-689 ---------- -MATKTAGVG RWEVVKKGRR PGVGAGAGGR GGGRNRRALG ENSBTAP00000023162/1-687 ---------- -MAAKTAGGG RWEVVKKGRR P--GAGGSGK GGGGDRRALG BACU014540/1-645 ---------- ---------- -MAVM----- ----MGSPVK QLWGNRRP-- ENSTTRP00000004821/1-687 ---------- -MSARTAGGG RWEVVKKGRR P--GAGSSGK GGGGDRRALG bmy_01068T0/1-783 QGGGRGGRVG AMSARTAGGG RWEVVKKGRR P--GAGGSGK GGGGDRRALG 101 150 ENSP00000238788/1-689 EANGVWKYDL TPAIQTTSTL YERGFENIMK RQNKEQVPPP AVEPKKPGNK ENSBTAP00000023162/1-687 EANGVWKYDL TPPIQTTSTL YERGFEKIMK RQNKEQVPPP AVEPKKPGNK BACU014540/1-645 -----W---L RAPIQTTSTL YERGFEKIMK RQNKEQVPPP AVEPKKPGNK ENSTTRP00000004821/1-687 EANGVWKYDL TPPIQTTSTL YERGFEKIMK RQNKEQVPPP AVEPKKPGNK bmy_01068T0/1-783 EANGVWKYDL TPPIQTTSTL YERGFEKIMK RQNKEQVPPP AVEPKKPGNK 151 200 ENSP00000238788/1-689 KQPKKVATPP NQNQKQGRFR SLEEALKALD VADLQKELDK SQSVFSGNPS ENSBTAP00000023162/1-687 KQAKKVATLT NQNQKQGRFR SLEEALKALD LADLQKELDK SQSVFSGNPS BACU014540/1-645 KQTKKVATLT NQNQKQGRFR SLEEALKALD LAALQKELDK SQSVFSGNPS ENSTTRP00000004821/1-687 KQTKKVATLT NQNQKQGRFR SLEEALKALD LAALQKELDK SQSVFSGNPS bmy_01068T0/1-783 KQTKKVATLT NQNQKQGRFR SLEEALKALD LAALQKELDK SQSVFSGNPS 201 250 ENSP00000238788/1-689 IWLKDLASYL NYKLQAPLSE PTLSQHTHDY PYSLVSRELR GIIRGLLAKA ENSBTAP00000023162/1-687 VWLKDLASYL NYKLQVPPSE PTLSQHPHDY PYSLVSRELR GIIRGLLAKA BACU014540/1-645 VWLKDLASYL NYKLQVPPSE PTLSQHTHDY PYSLVSRELR GIIRGLLAKA ENSTTRP00000004821/1-687 VWLKDLASYL NYKLQVPPSE PTLSQHTHDY PYSLVSRELR GIIRGLLAKA bmy_01068T0/1-783 VWLKDLASYL NYKLQVPPSE PTLSQHTHDY PYSLVSRELR GIIRGLLAKA 251 300 ENSP00000238788/1-689 AGSLELFFDH CLFTMLQELD KTPGESLHGY RICIQAILQD KPKIATANLG ENSBTAP00000023162/1-687 AGSLELFFDH CLFTMLQELD KTPGESLHGY RICIQAILQD KPKIVTTNLG BACU014540/1-645 AESLELFFDH CLFTMLQELD KTPGESLHGY RICIQAILQD KPKIATMNLG ENSTTRP00000004821/1-687 AESLELFFDH CLFTMLQELD KTPGESLHGY RICIQAILQD KPKIATMNLG bmy_01068T0/1-783 AESLELFFDH CLFTMLQELD KTPGESLHGY RICIQAILQD KPKIATMNLG 301 350 ENSP00000238788/1-689 KFLELLRSHQ SRPAKCLTIM WALGQAGFAN LTEGLK---- ---------- ENSBTAP00000023162/1-687 KFLELLRSHQ SRPAKCLTIM WALGQAGFTN LTEGLR---- ---------- BACU014540/1-645 KFLELLRSHQ SRPAKCLTIM WALGQAGFAN LTEGLR---- ---------- ENSTTRP00000004821/1-687 KFLELLRSHQ SRPAKCLTIM WALGQAGFAN LTEGLR---- ---------- bmy_01068T0/1-783 KFLELLRSHQ SQPAKCLTIM WALGQAGFAN LTEGLRGNEE VGKEEGGFGA 351 400 ENSP00000238788/1-689 ---------- ---------- ---VWLGIML PVLGIKSLSP FAITYLDRLL ENSBTAP00000023162/1-687 ---------- ---------- ---VWLGIML PVLGIKSLSP FAIAYLDRLL BACU014540/1-645 ---------- ---------- ---VWLGIML PVLGIKSLSP FAIAYLDRLL ENSTTRP00000004821/1-687 ---------- ---------- ---VWLGIML PVLGIKSLSP FAIAYLDRLL bmy_01068T0/1-783 RKLLFNVPSG SRPEASSLTF VSTVWLGIML PVLGIKSLSP FAIAYLDRLL 401 450 ENSP00000238788/1-689 LMHPNLTKGF GMIGPKDFFP LLDFAYMPNN SLTPSLQEQL CQLYPRLKVL ENSBTAP00000023162/1-687 LMHPNLTKGF GMIGPKDLFP LLDFAYMPNN SLTPSLQEQL CQLYPRLKVL BACU014540/1-645 LMHPNLTKGF GMIGPKDLFP LLDFAYMPNN SLTPSLQEQL CQLYPRLKVL ENSTTRP00000004821/1-687 LMHPNLTKGF GMIGPKDLFP LLDFAYMPNN SLTPSLQEQL CQLYPRLKVL bmy_01068T0/1-783 LMHPNLTKGF GMIGPKDLFP LLDFAYMPNN SLTPSLQEQL CQLYPRLKVL 451 500 ENSP00000238788/1-689 AFGAKPDSTL HTYFPSFLSR ATPSCPPEMK KELLSSLTEC LTVDPLSASV ENSBTAP00000023162/1-687 AFGAKPESTL HTYFPSFLSR ATPGCPLEMK KELLRSLTEC LMVDPLSTSV BACU014540/1-645 AFGAKPESTL HTYFPSFLSR ATPSCPPEMK KELLSSLTEC LAVDPFSTGV ENSTTRP00000004821/1-687 AFGAKPESTL HTYFPSFLSR ATPGCPPEMK KELLSSLTEC LTVDPFSTGV bmy_01068T0/1-783 AFGAKPESTL HTYFPSFLSR ATPSCPPEMK KELLSSLTEC LAVDPFSTGV 501 550 ENSP00000238788/1-689 WRQLYPKHLS QSSLLLEHLL SSWEQIPKKV QKSLQETIQS LKLTNQELLR ENSBTAP00000023162/1-687 WRQLYPKHLS QSSLLLEHLL RSWERIPKKT QKSLQETIQS FKLTNQDLLR BACU014540/1-645 WRQLYPKHAS Q--------- ------SRQT QKSLQETIQS FKLTNQDLLG ENSTTRP00000004821/1-687 WRQLYPKHLS QSSLLLEHLL RSWERIPKKT QKSLQETIQS FKLTNQDLLG bmy_01068T0/1-783 WRQLYPKHAS H--LLLEHLL RSWERIPKKT QKSLQETIQS FKLTNQDLLG 551 600 ENSP00000238788/1-689 KGSSNNQDVV TCDMACKGLL QQVQGPRLPW TRLLLLLLVF AVGFLCHDLR ENSBTAP00000023162/1-687 KGGGSNQDVV TCDSACKSLL QQARGFQLPW TRLLLLVLVF AIGFLCHDFR BACU014540/1-645 KGSCSNQDVI ACDAACKSLL QQARGFWLPW TRLLVLVLVF AIGFLCHDLW ENSTTRP00000004821/1-687 KGSCSNQDVI TCDAACKSLL QQARGFWLPW TRLLLLVLVF AIGFLCHDFR bmy_01068T0/1-783 KGSCSNQDVI ACDAACKSLL QQARGFWLPW TRLLVLVLVF AIGFLCHDFR 601 650 ENSP00000238788/1-689 SHSSFQASLT GRLLRSSGFL PASQQACAKL YSYSLQGYSW LGETLPLWGS ENSBTAP00000023162/1-687 SHSSFQASLS GQLLQSSGVL PAGQQACTKI YSYSLQGYSW LEKTLPAWGS BACU014540/1-645 SHSSFQASLS GRLLHSSGVL PAVQQACTKI YSYSLQGYSW LEETLPAWGS ENSTTRP00000004821/1-687 SHSSFQASFS GRLLHSSGVL PAGQQACTKI YSYSLQGYSW LEETLPAWGS bmy_01068T0/1-783 SHSSFQASLS GRLLHSSGVL PAVQQACTKI YSYSLQGYSW LEETLPAWGS 651 700 ENSP00000238788/1-689 HLLTVVRPSL QLAWAHTNAT VSFLSAHCAS HLAWFGDSLT SLSQRLQIQL ENSBTAP00000023162/1-687 HLLTVVRPGL QLAWAHTNAT VGFLSAHCAS HLAWFGDSLA NLFQRLQTQL BACU014540/1-645 HLLIMVRPSL QLAWAHTNAT VSFLSAHCAS HLAWLGDSLT SLSQRLQIQL ENSTTRP00000004821/1-687 HLLTMVRPSL QLAWAHTSAT VSFLSAHCAS HLAWFGDSLT SLSQRLQTQL bmy_01068T0/1-783 HLLTMVRPSL QLAWAHTNAT VSFLSAHCAS HLAWLGDSLT SLSQRLQIQL 701 750 ENSP00000238788/1-689 PDSVNQLLRY LRELPLLFHQ NVLLPLWHLL LEALAWAQEH CHEACRGEVT ENSBTAP00000023162/1-687 PDTLNQLLRS LRELLLFLYH SILLPTWHML LEALAQIQEH CHEACRGEVT BACU014540/1-645 PDALNQLLHS LRELLLFLYQ SVLLPTWHML LEALARVQEH CHEACRGGVT ENSTTRP00000004821/1-687 PDALNQLLHS LRELLLFLYQ NVLLPTWHML LEALARAQEH CHEACRGGVT bmy_01068T0/1-783 PEALNQLLRS LRELLLFLYQ SVLLPTWHML LEALARVQEH CHEACRGGVT 751 800 ENSP00000238788/1-689 WDCMKTQLSE AVHWTWLCLQ DITVAFLDWA LALISQQ ENSBTAP00000023162/1-687 WDCMKTQLSE AAHWTWLRLQ DTTVAFLDWA LAMISQQ BACU014540/1-645 WDCVKTQLSE AAHRTWLCLQ DTTVAFLDWA FAMLSQQ ENSTTRP00000004821/1-687 WDCVKTQLSE AAHQTWLCLQ ETTVAFLNWA FAMIPQQ bmy_01068T0/1-783 WDCVKTQLSE AAHRTWLCLQ DTTVAFLDWA FAMISQQ