KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:03 2014 Check: 00 .. Name: ENSTTRP00000002596/1-243 Len: 275 Check: 9942 Weight: 1.00 Name: ENSP00000417175/1-243 Len: 275 Check: 6897 Weight: 1.00 Name: ENSBTAP00000023164/1-243 Len: 275 Check: 4835 Weight: 1.00 Name: bmy_00226T0/1-204 Len: 275 Check: 1463 Weight: 1.00 Name: BACU018659/1-228 Len: 275 Check: 3715 Weight: 1.00 // 1 50 ENSTTRP00000002596/1-243 MAKXXXXXXX XXXXXXXXXX PFTDVVTTNL KLGNPTDRNV CFKVKTTAPR ENSP00000417175/1-243 MAKVEQVLSL EPQHELKFRG PFTDVVTTNL KLGNPTDRNV CFKVKTTAPR ENSBTAP00000023164/1-243 MAKVEQVLSL EPQHELKFRG PFTDVVTTNL KLGNPTDRNV CFKVKTTAPR bmy_00226T0/1-204 ---------- ---------- ---------- ---------- ---------- BACU018659/1-228 ---------- -----SHSTG PFTDVVTTNL KLGNPTDRNV CFKVKTTAPR 51 100 ENSTTRP00000002596/1-243 RYCVRPNSGI IDAGASINVS VMLQPFDYDP NEKSKHKFMV QSMFAPTDTS ENSP00000417175/1-243 RYCVRPNSGI IDAGASINVS VMLQPFDYDP NEKSKHKFMV QSMFAPTDTS ENSBTAP00000023164/1-243 RYCVRPNSGI IDAGASINVS VMLQPFDYDP NEKSKHKFMV QSMFAPTDTS bmy_00226T0/1-204 ---------- ---------- -MLQPFDYDP NEKSKHKFMV QSMFAPTDTS BACU018659/1-228 RYCVRPNSGI IDAGASINVS VMLQPFDYDP NEKSKHKFMV QSMFAPTDTS 101 150 ENSTTRP00000002596/1-243 DMEAVWKEAK PEDLMDSKLR CVFELPAEND KPHDVEINKI ISTTASKTET ENSP00000417175/1-243 DMEAVWKEAK PEDLMDSKLR CVFELPAEND KPHDVEINKI ISTTASKTET ENSBTAP00000023164/1-243 DMEAVWKEAK PEDLMDSKLR CVFELPAEND KPHDVEINKI IPTTASKTET bmy_00226T0/1-204 DMEAVWKEAK PEDLMDSKLR CVFELPAEND KPHDVEINKI ISTTASKTET BACU018659/1-228 DMEAVWKEAK PEDLMDSKLR CVFELPAEND KPHDVEINKI ISTTASKTET 151 200 ENSTTRP00000002596/1-243 PTVSKALSSS LDDTEVKKVM EECKRLXXXX XXXXXXXXXX X--------- ENSP00000417175/1-243 PIVSKSLSSS LDDTEVKKVM EECKRLQGEV QRLREENKQF K--------- ENSBTAP00000023164/1-243 PTVSKALSSS LDDTEVKKVM EECKRLQSEV QRLREENKQF K--------- bmy_00226T0/1-204 PTVSKALSSS LDDTEVKKVM EECKRLQSEV QRLREENKQF KGSRGGPDTS BACU018659/1-228 PTVSKALSSS LDDTEVKKVM EECKRLQSEV QRLREENKQF K--------- 201 250 ENSTTRP00000002596/1-243 ---------- ---------- ---EEDGLRM RKAAQSNSPV PVLAAAGKEE ENSP00000417175/1-243 ---------- ---------- ---EEDGLRM RKTVQSNSPI SALAPTGKEE ENSBTAP00000023164/1-243 ---------- ---------- ---EEDGLRM RKTAQSNSPA PASAMAGKEE bmy_00226T0/1-204 TDNQCDEWCH RDGHECHGKS ARWEEDGLRM RKAAQSNSPV PALAAAGKEE BACU018659/1-228 ---------- ---------- ---EEDGLRM RKAAQSNSPV PALATAGKEE 251 300 ENSTTRP00000002596/1-243 GLSTRLLALV VLFFIVGVII GKIAL ENSP00000417175/1-243 GLSTRLLALV VLFFIVGVII GKIAL ENSBTAP00000023164/1-243 GLSTRLLALV VLFFIVGVII GKIAL bmy_00226T0/1-204 GLSARLLALV VLFFIVGVII GKIAL BACU018659/1-228 GLSTRLLALV VLFFIVGVII GKIAL