KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:04 2014 Check: 00 .. Name: ENSP00000386543/1-727 Len: 727 Check: 176 Weight: 1.00 Name: ENSBTAP00000023171/1-727 Len: 727 Check: 9395 Weight: 1.00 Name: ENSTTRP00000001185/1-726 Len: 727 Check: 7557 Weight: 1.00 Name: bmy_00336T0/1-638 Len: 727 Check: 3576 Weight: 1.00 Name: BACU013906/1-614 Len: 727 Check: 5980 Weight: 1.00 // 1 50 ENSP00000386543/1-727 MQQKTKLFLQ ALKYSIPHLG KCMQKQHLNH YNFADHCYNR IKLKKYHLTK ENSBTAP00000023171/1-727 MQQKSKLFLQ ALKYSIPHLG KCMQKEHLNH CNFADRYYHR IKLKKYHLTK ENSTTRP00000001185/1-726 MQQKSKLFLQ ALKYSIPHLG KCMQKQHVNH CNFADHYYNR IKLKKYHLTK bmy_00336T0/1-638 ---------- ---------- ---------- ---------- ---------- BACU013906/1-614 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000386543/1-727 CLQNKPKISE LARNIPSRSF SCKDLQPVKQ ENEKPLPENM DAFEKVRTKL ENSBTAP00000023171/1-727 CLQNKPSISE LARNIPSRNF SCKEFLPVLP VQLKELTEQI SIYLEIKNQL ENSTTRP00000001185/1-726 CLQNKPRISE LARNIPSRNF SCKEFLPIKQ ENKKSLSENM DAFEKVRTKL bmy_00336T0/1-638 ---------- ---------- ---------- ---------M DAFEKVRTKL BACU013906/1-614 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000386543/1-727 ETQPQEEYEI INVEVKHGGF VYYQEGCCLV RSKDEEADND NYEVLFNLEE ENSBTAP00000023171/1-727 QGKPMEEYEI INAEIKHGGF VYYQEGCCLV RSKDEEADND NYEVLFNLEE ENSTTRP00000001185/1-726 ETQPQEEYEI INAEIKHGGF VYYQEGCCLV RSKDEEADND NYEVLFNLEE bmy_00336T0/1-638 ETQPQEEYEI INAEIKHGGF VYYQEGCCLV RSKDEEADND NYEVLFNLEE BACU013906/1-614 ---------- ---QIKHGGF VYYQEGCCLV RSKDEEADND NYEVLFNLEE 151 200 ENSP00000386543/1-727 LKLDQPFIDC IRVAPDEKYV AAKIRTEDSE ASTCVIIKLS DQPVMEASFP ENSBTAP00000023171/1-727 LKLEQPFIDC IRVAPDEKYV AAKIRTEDSE ASTCIVVKLS DQPVMEASFP ENSTTRP00000001185/1-726 LKLEQPFIDC IRVAPDEKYV AAKIRTEDSE ASTCVVVKLG DQPVMEASFP bmy_00336T0/1-638 LKLEQPFIDC IRVAPDEKYV AAKIRTEDSE ASTCVVVKLS DQPVMEASFP BACU013906/1-614 LKLEQPFIDC IRVAPDEKYV AAKIRTEDSE ASTCVVVKLS DQPVMEASFP 201 250 ENSP00000386543/1-727 NVSSFEWVKD EEDEDVLFYT FQRNLRCHDV YRATFGDNKR NERFYTEKDP ENSBTAP00000023171/1-727 NVSSFEWVKD EEDEDVLFYT FQRNLRCHDV YRATFGDNKR NERFYTEKDP ENSTTRP00000001185/1-726 NVSSFEWVKD EEDEDVLFYT FQRNLRCHDV YRATFGDNRR NERFYTEKDP bmy_00336T0/1-638 NVSSFEWVKD EEDEDVLFYT FQRNLRCHDV YRATFGDNRR NERFYTEKDP BACU013906/1-614 NVSSFEWVKD EEDEDVLFYT FQRNLRCHDV YRATFGDNRR NERFYTEKDP 251 300 ENSP00000386543/1-727 SYFVFLYLTK DSRFLTINIM NKTTSEVWLI DGLSPWDPPV LIQKRIHGVL ENSBTAP00000023171/1-727 SFFVFLYLTK DSRFLTMNIM SKTTSEVWLI DGLSPWDPPV LIQKRIHGVL ENSTTRP00000001185/1-726 SFFVFLYLTK DSRFLTMNIM NKTTSEVWLI DGMSPWDPPV LIQKRIHGVL bmy_00336T0/1-638 SFFVFLYLTK DSRFLTMNIM NKTTSEVWLI DGMSPWDPPV LIQKRIHGVL BACU013906/1-614 SFFVFLYLTK DSRFLTMNIM NKTTSEVWLI DGMSPWDPPV LIQKRIHGVL 301 350 ENSP00000386543/1-727 YYVEHRDDEL YILTNVGEPT EFKLMRTAAD TPAIMNWDLF FTMKRNTKVI ENSBTAP00000023171/1-727 YYVEHRDDEL YILTNVGEPT EFKLMRTAAD TPAIMNWDLF FTMKRNTKVV ENSTTRP00000001185/1-726 YYVEHRDDEL YILTNVGEPT EFKLMRTAAD TPAIMNWDLF FTMKRNTKVV bmy_00336T0/1-638 YYVEHRDDEL YILTNVGEPT EFKLMRTAAD TPAIMNWDLF FTMKRNTKVV BACU013906/1-614 YYVEHRDDEL YILTNVGEPT EFKLMRTAAD TPAIMNWDLF FTMKRNTKVV 351 400 ENSP00000386543/1-727 DLDMFKDHCV LFLKHSNLLY VNVIGLADDS VRSLKLPPWA CGFIMDTNSD ENSBTAP00000023171/1-727 DLDMFKDHCV LFLKHSNLLY VNVIGLADDS VRSLKLPPWA CGFIIDTNSD ENSTTRP00000001185/1-726 DLDMFKDHCV LFLKHSNLLY VNVIGLADDS VRSLKLPPWA CGFIMDTNSD bmy_00336T0/1-638 DLDMFKDHCV LFLKHSNLLY VNVIGLADDS VRSLKLPPWA CGFIMDTNSD BACU013906/1-614 DLDMFKDHCV LFLKHSNLLY VNVIGLADDS VRSLKLPPWA CGFIMDTNSD 401 450 ENSP00000386543/1-727 PKNCPFQLCS PIRPPKYYTY KFAEGKLFEE TGHEDPITKT SRVLRLEAKS ENSBTAP00000023171/1-727 PKNCPFQLCS PIRPPKYYTY KFAEGKLFEE TGHEDPITKT SRVLRMEAKS ENSTTRP00000001185/1-726 PKNCPFQLCS PIRPPKYYTY KFSEGKLFEE TGHEDPITKT SRVLRIEAKS bmy_00336T0/1-638 PKNCPFQLCS PIRPPKYYTY KFAEGKLFEE TGHEDPITKT SRVLRIEAKS BACU013906/1-614 PKNCPFQLCS PIRPPKYYTY KFAEGKLFEE TGHEDPITKT SRVLRIEAKS 451 500 ENSP00000386543/1-727 KDGKLVPMTV FHKTDSEDLQ KKPLLVHVYG AYGMDLKMNF RPERRVLVDD ENSBTAP00000023171/1-727 KDGKLVPMTV FHKTDSEDLQ KKPLLVQVYG AYGMDLKMNF RPERRVLVDD ENSTTRP00000001185/1-726 EDGKLVPMTI FHKTDSEDLQ KKPLLVHVYG AYGMDLKMNF RPERRVLVDD bmy_00336T0/1-638 KDGKLVPMTI FHKTDSEDLQ KKPLLVHVYG AYGMDLKMNF RPERRVLVDD BACU013906/1-614 KDGKLVPMTI FHKTDSEDLQ KKPLLVHVYG AYGMDLKMNF RPERRVLVDD 501 550 ENSP00000386543/1-727 GWILAYCHVR GGGELGLQWH ADGRLTKKLN GLADLEACIK TLHGQGFSQP ENSBTAP00000023171/1-727 GWILAYCHVR GGGELGLQWH ADGRLTKKLN GLADLEACIK TLHDQGFSQP ENSTTRP00000001185/1-726 GWILAYCHVR GGGELGLQWH ADGRLTKKLN GLADLEACIK TLHGQGFSQP bmy_00336T0/1-638 GWILAYCHVR GGGELGLQWH ADGRLTKKLN GLADLEACIK TLHGQGFSQP BACU013906/1-614 GWILAYCHVR GGGELGLQWH ADGRLTKKLN GLADLEACIK TLHGQGFSQP 551 600 ENSP00000386543/1-727 SLTTLTAFSA GGVLAGALCN SNPELVRAVT LEAPFLDVLN TMMDTTLPLT ENSBTAP00000023171/1-727 SLTALTAFSA GGVLVGALCN SSPELLRAVT LEAPFLDVLN TMMDTTLPLT ENSTTRP00000001185/1-726 SLTTLTAFSA GGVLVGALCN SNPELLRAVT LEAPFLDVLN TMMDTTLPLT bmy_00336T0/1-638 SLTTLTAFSA GGVLVGALCN SNPELLRAVT LEAPFLDVLN TMMDTTLPLT BACU013906/1-614 SLTTLTAFSA GGVLVGALCN SNPELLRAVT LEAPFLDVLN TMMDTTLPLT 601 650 ENSP00000386543/1-727 LEELEEWGNP SSDEKHKNYI KRYCPYQNIK PQHYPSIHIT AYENDERVPL ENSBTAP00000023171/1-727 LEELEEWGNP SSDENHKNYI KRYCPCQNIK PQHYPSIHIT AYENDERVPL ENSTTRP00000001185/1-726 LEELEEWGNP SSDEKHKNYI KRYCPYQNIK PKHYPSIHIT AYENDERVPL bmy_00336T0/1-638 LEELEEWGNP SSDEKHKNYI KRYCPYQNIK PKHYPSIHIT AYENDERVPL BACU013906/1-614 LEELEEWGNP SSDEKHKNYI KRYCPYQNIK PKHYPSIHIT AYENDERVPL 651 700 ENSP00000386543/1-727 KGIVSYTEKL KEAIAEHAKD TGEGYQTPNI ILDIQPGGNH VIEDSHKKIT ENSBTAP00000023171/1-727 KGIVNYTEKL KEAIAEHAKD SGEGYQVPNI ILDIQPGGNH VIEDSHKKIT ENSTTRP00000001185/1-726 KGIVNYTEKL KEAIVEHAKD TGEGYQAPNI ILDIQPGGSH VIEDSHKKIT bmy_00336T0/1-638 KGIVNYTEKL KEAIVEHAKD TGEGYQAPNI ILDIQPGGNH VIEDSHKKIT BACU013906/1-614 KGIVNYTEKL KEAIVEHAKD TGEGYQAPNI ILDIQPGGNH VIEDSHKKIT 701 750 ENSP00000386543/1-727 AQIKFLYEEL GLDSTSVFED LKKYLKF ENSBTAP00000023171/1-727 AQIKFLYEEL GLDSTSVFDN LKKYLKF ENSTTRP00000001185/1-726 AQIKFLYEEL GLDSTSVFEN LKKYL-F bmy_00336T0/1-638 AQIKFLYEEL GLDSTSVFEN LKKYLKF BACU013906/1-614 AQIKFLYEEL GLDSTSVFEN LKKYLKF