KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:05 2014 Check: 00 .. Name: ENSP00000375894/1-319 Len: 341 Check: 9916 Weight: 1.00 Name: ENSBTAP00000023175/1-319 Len: 341 Check: 205 Weight: 1.00 Name: ENSTTRP00000013524/1-318 Len: 341 Check: 6644 Weight: 1.00 Name: BACU010967/1-341 Len: 341 Check: 2120 Weight: 1.00 Name: bmy_04898T0/1-341 Len: 341 Check: 3938 Weight: 1.00 // 1 50 ENSP00000375894/1-319 MSQQNTSGDC LFDGVNELMK TLQFAVHIPT FVLGLLLNLL AIHGFSTFLK ENSBTAP00000023175/1-319 MSQQNHSENC SFNDVKQLME TVQLAVHIPT FILGLLLNVL AIRGFSSFLK ENSTTRP00000013524/1-318 MSQRNQSENC SFHDVEVLMK TVQLAVHTPT FLLGLLLNLL AIRGFSSFLK BACU010967/1-341 MSQLNQSENC SFHDVDELMK TVQLAVHIPT FLLGLLLNLL AIRGFSSFLK bmy_04898T0/1-341 MSQLSQSEYC SFHDVDELMK TVQLAVHIPT FLLGLLLNLL AIRGFSSFLK 51 100 ENSP00000375894/1-319 NRWPDYAATS IYMINLAVFD LLLVLSLPFK MVLSQVQSPF PSLCTLVECL ENSBTAP00000023175/1-319 KRWPCYTATS IYMINLAVFD LLLVLSLPFK MFLSRRQGSF LPFCTLVECL ENSTTRP00000013524/1-318 KRWPCYAATS IYMINLAVFD LLLVFSLPFK MALSHVKAPL LPLCTLVECL BACU010967/1-341 KRWPCYAATS IYMINLAVFD LLLVLSLPFK MALSHVKAPL LPFCTLVECL bmy_04898T0/1-341 KRWPCYAATS IYMINLAVFD LLLVLSLPFK MALSHVKAPL LPFCTLVECL 101 150 ENSP00000375894/1-319 YFVSMYGSVF TICFISMDRF LAIRYPLLVS HLRSPRKIFG ICCTIWVLVW ENSBTAP00000023175/1-319 YFISMYGSIF TICFISLDRF LAIRYPILVS HIRSPRKIFG ICCIIWVLVW ENSTTRP00000013524/1-318 YFISMYGSIF TICYISLDRF LAIRYPLLVS HLRSPRKTFG ICFTIWVLVW BACU010967/1-341 YFISMYGSIF TICFISLDRF LAIRYPLLVS HLRSPRKTFG ICCAIWVLVW bmy_04898T0/1-341 YFISMYGSIF TICFISLDRF LAIRYPLLVS HLRSPRKTFG ICXVIWVLVW 151 200 ENSP00000375894/1-319 TGSIPIYSFH GKVEKYMCFH NMSDDTWSAK VFFPLEVFGF LLPMGIMGFC ENSBTAP00000023175/1-319 VGSTPVYSFH GKVQNYTCFN NMTDGTWSAK VFFPFEVFGF LLPMSIIGFC ENSTTRP00000013524/1-318 VGSTPIYSFH GKVENYTCFH NMSDGTWSAK VFFPLEVFGF LLPMSIMGFC BACU010967/1-341 VGSTPIYSFH GKVEDYRCFH NMSDGTWSAK VFFPLEVFGF LLPMSIMGFC bmy_04898T0/1-341 VGSTPIYSFH GKVEDYTCFH NMSDGTWSAK VFFPLEVFGF LLPMSIMGFC 201 250 ENSP00000375894/1-319 CSRSIHILLG RRDHTQDWVQ QKACIYSIAA SLAVFVVSFL PVHLGFFLQF ENSBTAP00000023175/1-319 SSRSIHILVA RRDHTRDWVQ QKACIWTIAV SLAVFVVSFL PVHLSFFLQF ENSTTRP00000013524/1-318 SSRSICILVA RRDHTQDWVQ QKACIWTIAA SLAVFVVSFL PVHLSFLLQF BACU010967/1-341 SYRNICILVA RQDHTQDWVQ QKACIWTIAA SLAVFVVSFL PVHLSFLLQF bmy_04898T0/1-341 SSRSICILVA RRDHTQDWVQ QKACIWTIAA SLAVFVVSFL PVHLSFLLQF 251 300 ENSP00000375894/1-319 LVRNSFIVEC RAKQSISFFL QLSMCFSNVN CCLDVFCYYF VIKEFRMNIR ENSBTAP00000023175/1-319 LVRNGFIVEC RAKQNIILFL QLSMCFSNFN CCLDVFCYYF VIKEFRMDIM ENSTTRP00000013524/1-318 LVRNGFIVEC RAKQNIILFL QLSMCFSNIN CCLDVFCYYF VIKEFRMDIM BACU010967/1-341 LVRNGFIVEC RAKKNIILFL QLSMCFSNIN CCLDVFCYYF VIKEFRTDMM bmy_04898T0/1-341 LVRNGFIVEC RAKQNIILFL QLSMCFSNIN CCLDVFCYYF VIKEFRMDMM 301 350 ENSP00000375894/1-319 AHRPSRVQLV LQDTTISRG- ---------- ---------- - ENSBTAP00000023175/1-319 AHRPSRSQLV HQDTLTTMA- ---------- ---------- - ENSTTRP00000013524/1-318 AHQPSRVQLV LQNTMHHG-- ---------- ---------- - BACU010967/1-341 AYQPPRAQLV LQDTMTTMAK GRQLCLEEGN LGLNSTADTS S bmy_04898T0/1-341 AHQPPRAQLV LQDTMTTMVK GRKLCLEEGN LGLNSTADTS S