KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:05 2014 Check: 00 .. Name: ENSTTRP00000008831/1-377 Len: 427 Check: 5509 Weight: 1.00 Name: ENSP00000386264/1-408 Len: 427 Check: 7246 Weight: 1.00 Name: ENSBTAP00000023181/1-400 Len: 427 Check: 2185 Weight: 1.00 Name: bmy_02987T0/1-320 Len: 427 Check: 3018 Weight: 1.00 Name: BACU014131/1-402 Len: 427 Check: 7691 Weight: 1.00 // 1 50 ENSTTRP00000008831/1-377 ---------- ----RPPRAL P--------- ---PV-PS-- IDDIPLSRPK ENSP00000386264/1-408 MRTDSGARLE EGHLRPPRAL P--------- ---PV-PS-- QDDIPLSRPK ENSBTAP00000023181/1-400 MGKKQ----- ---VRPPRAL P--------- ---PV-PSAI QDDIPLSRPK bmy_02987T0/1-320 MRADSG---- ---LRVEEDH PFSFSFPHSV LHEPFHLC-- QDDIPLSRPK BACU014131/1-402 MRADSG---- ---LRVDEDH P--------- ---VS----- -DDIPLSRPK 51 100 ENSTTRP00000008831/1-377 KKKPRTKTTL ASASLEGLVQ TAVHRPPEGS EPPTKDPIEH QEAPVQRRQK ENSP00000386264/1-408 KKKPRTKNTP ASASLEGLAQ TAGRRPSEGN EPSTKELKEH PEAPVQRRQK ENSBTAP00000023181/1-400 KKKPRTKTPL ASASSEGLVQ TAVHRPPEGS EPPTKDSIEH QEAPVQRRQK bmy_02987T0/1-320 KKKPRTKTTL ASASLEGLVQ TAVHRPPEGS EPPTKDPIDH QEAPVQRRQK BACU014131/1-402 KKKPRTKTTL ASASLEGLVQ TAVHRPPEGS EPPTKDPIEH QEAPVQRRQK 101 150 ENSTTRP00000008831/1-377 KTKLPLELET AFTQKKTSSA SLLPNENGIN VEPAEEPAIQ KPRRKTKKTQ ENSP00000386264/1-408 KTRLPLELET SSTQKKSSSS SLLRNENGID AEPAEEAVIQ KPRRKTKKTQ ENSBTAP00000023181/1-400 KTRLPLELET TLTQKKTASP SLLPNENGIN VEPDEEPVIQ KPRRKTKKTQ bmy_02987T0/1-320 KTKLPLELET AFTQKKTSSS SLLPNENGIN VEPAEEPAIQ KPRRKTK--- BACU014131/1-402 KTKLPLDLET AFTQKKTSSP SLLPNENGIN VEPAEEPAIR KPRRKTKKTQ 151 200 ENSTTRP00000008831/1-377 PAELHYANEL GVEDEDIITD EQSSPEQQSV LTAPTGISQP V----GKVFV ENSP00000386264/1-408 PAELQYANEL GVEDEDIITD EQTTVEQQSV FTAPTGISQP V----GKVFV ENSBTAP00000023181/1-400 PAELHYANEL GVEDEDIITD EQSSPEQQSV FTAPTGISQP V----GKVFV bmy_02987T0/1-320 ---------- ---------- ---------- ---------- ---------- BACU014131/1-402 PAELHYANEL GVEDEDIITD EQSSPEQQSV LTAPTGISQP VFSAIGSGIG 201 250 ENSTTRP00000008831/1-377 EKSRRFQAAD RSELIKTTEK IDVSMDMKPS WTTRDVALSV NRAFRMIGLF ENSP00000386264/1-408 EKSRRFQAAD RSELIKTTEN IDVSMDVKPS WTTRDVALTV HRAFRMIGLF ENSBTAP00000023181/1-400 EKSRRFQAAD RAELIKTTEK IDVSMDMKPS WTTRDVALSV HRAFRMIGVF bmy_02987T0/1-320 ---------- ---------- ---------- ---------- -----MIGLF BACU014131/1-402 GGAGRFQAAD RSELIKTTEK IDVSMDMKPS WTTRDVALSV NRAFRMIGLF 251 300 ENSTTRP00000008831/1-377 SHGFLAGCAV WNIVVIYVLA GDELSNLSNL LQQYKTLAYP FQSLLYLLLA ENSP00000386264/1-408 SHGFLAGCAV WNIVVIYVLA GDQLSNLSNL LQQYKTLAYP FQSLLYLLLA ENSBTAP00000023181/1-400 SHGFLAGCAV WNIVVIYVLA GDELSDLSNL LQQYKTLAYP FQSLLYLLLA bmy_02987T0/1-320 SHGFLAGCAV WNIVVIYVLA GDKLSNLSNL LQQYKTLAYP FQSLLYLLLA BACU014131/1-402 SHGFLAGCAV WNIVVIYVLA GDELSNLSNL LQQYKTLAYP FQSLLYLLLA 301 350 ENSTTRP00000008831/1-377 LSTVSAFD-- ---------- -----SPTAL ASFLYFTALI LSLSQQMTSD ENSP00000386264/1-408 LSTISAFDRI DFAKISVAIR NFLALDPTAL ASFLYFTALI LSLSQQMTSD ENSBTAP00000023181/1-400 LSTVSAFDRI DFAKTSVAIR NFLALDPRAL ASFLYFTALV LSLSQQMTSD bmy_02987T0/1-320 LSTVSAFDRI DFAKTSVAIR NFLALDPTAL ASFLYFTALI LSLSQQMTSD BACU014131/1-402 LSTVSAFDRI DFAKTSVAIR NFLALDPTAL ASFLYFTALI LSLSQQMTSD 351 400 ENSTTRP00000008831/1-377 RIHLYTPSSV NGSLXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000386264/1-408 RIHLYTPSSV NGSLWEAGIE EQILQPWIVV NLVVALLVGL SWLFLSYRPG ENSBTAP00000023181/1-400 RIHLYTPSSV NGSLWAEGIE EQVLQPWIVV NLVVAVLVGL SWLFLSYRPG bmy_02987T0/1-320 RIHLYTPSSV NGSLWAEGVE EQVLQPWIVV NLVVALLVGL SWLFLSYRPG BACU014131/1-402 RIHLYTPSSV NGSLWAEGVE EQVLQPWIVV NLVVALLVGL SWLFLSYRPG 401 450 ENSTTRP00000008831/1-377 XXXXXXLMFS SDVEEYPDKD RGIKASS ENSP00000386264/1-408 MDLSEELMFS SEVEEYPDKE KEIKASS ENSBTAP00000023181/1-400 MDLSEELMFS SDVEEYPDK- -GIKVSS bmy_02987T0/1-320 MDLSEELMFS SDVEEYPDKD KGIKASS BACU014131/1-402 MDLSEELMFS SDVEEYPDKD KGIKASS