KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:06 2014 Check: 00 .. Name: ENSBTAP00000023190/1-866 Len: 867 Check: 7480 Weight: 1.00 Name: ENSP00000434199/1-867 Len: 867 Check: 8048 Weight: 1.00 Name: bmy_03640T0/1-846 Len: 867 Check: 8858 Weight: 1.00 Name: BACU005598/1-862 Len: 867 Check: 889 Weight: 1.00 Name: ENSTTRP00000005390/1-866 Len: 867 Check: 2397 Weight: 1.00 // 1 50 ENSBTAP00000023190/1-866 MENEKENLFF EPHKRGLMKT PLKESTAANI VLADIQPDFG PLTTPTKPKE ENSP00000434199/1-867 MENEKENLFC EPHKRGLMKT PLKESTTANI VLAEIQPDFG PLTTPTKPKE bmy_03640T0/1-846 -----ENLFF EPHKRGLVKT PLKESTAANI VLAEIQPDFG PLTTPTKPKE BACU005598/1-862 ----QENLFF EPHKRGLVKT PLKESTAANI LLAEIQPDFG PLTTPTKPKE ENSTTRP00000005390/1-866 MENEKENLFF EPHKRGLVKT PLKESTAANI VLAEIQPDFG PLTTPTKPKE 51 100 ENSBTAP00000023190/1-866 ISQGEPWTPT ANLKMLISAV SPEIRNRDQK RGLFDNRNGL SDVKDCLHEH ENSP00000434199/1-867 GSQGEPWTPT ANLKMLISAV SPEIRNRDQK RGLFDNRSGL PEAKDCIHEH bmy_03640T0/1-846 ISQGEPWTPT ANLKMLISAV SPEIRYRDQK RGLFDNGNGL PEARDCLHEH BACU005598/1-862 ISQGEPWTPT ANLKMLISAV SPEIRYRDQK RGLFDNGNGL PEARDCLHEH ENSTTRP00000005390/1-866 ISQGEPWTPT ANLKMLISAV SPEIRYRDQK RGLFDNGNGL PEARDCLHEH 101 150 ENSBTAP00000023190/1-866 FSGDEYEKSQ PSRKEKSLGL LCHKFLARYP NYPNPAVNND ICLDEVAEEL ENSP00000434199/1-867 LSGDEFEKSQ PSRKEKSLGL LCHKFLARYP NYPNPAVNND ICLDEVAEEL bmy_03640T0/1-846 LSGDEYEKSQ PSRKEKSLGL LCHKFLARYP NYPNPAVNND ICLDEVAEEL BACU005598/1-862 LSGDEYEKSQ PSRKEKSLGL LCHKFLARYP NYPNPAVNND ICLDEVAEEL ENSTTRP00000005390/1-866 LSGDEYEKSQ PSRKEKSLGL LCHKFLARYP NYPNPAVNND ICLDEVAEEL 151 200 ENSBTAP00000023190/1-866 NVERRRIYDI VNVLESLHMV SRLAKNRYTW HGRHNLNQIL ETLKSVGEEN ENSP00000434199/1-867 NVERRRIYDI VNVLESLHMV SRLAKNRYTW HGRHNLNKTL GTLKSIGEEN bmy_03640T0/1-846 NVERRRIYDI VNVLESLHMV SRLAKNRYTW HGRHNLNQTL GTLKSVGEEN BACU005598/1-862 NVERRRIYDI VNVLESLHMV SRLAKNRYTW HGRHNLNQTL GTLKSVGEEN ENSTTRP00000005390/1-866 NVERRRIYDI VNVLESLHMV SRLAKNRYTW HGRHNLNQTL GTLKSVGEEN 201 250 ENSBTAP00000023190/1-866 KYAEQIMMIK KKEYEQEFEV SKSYNTEDPI IKSNTGQNGH PDMCCAERPG ENSP00000434199/1-867 KYAEQIMMIK KKEYEQEFDF IKSYSIEDHI IKSNTGPNGH PDMCFVELPG bmy_03640T0/1-846 KYAEQIMMIK KKEYEQEFDF XKSYRIEDPI IKSNTGQNGH PDMCFVELPG BACU005598/1-862 KYAEQIMMIK KKEYEQEFDF SKSYRIEDPI IKSNTGQNGH PDMCFVELPG ENSTTRP00000005390/1-866 KYAEQIMMIK KKEYEQEFDF SKSYRIEDPI IKSNTGQNGH PDMCFVELPG 251 300 ENSBTAP00000023190/1-866 VELRAASVNS RKDKSLKVMS QKFVTLFLVS TPQIVSLEIA AKILTWEDHV ENSP00000434199/1-867 VEFRAASVNS RKDKSLRVMS QKFVMLFLVS TPQIVSLEVA AKILIGEDHV bmy_03640T0/1-846 VEFRAASVNS RKDKSLRVMS QKFVMLFLVS TPQIVSLEIA AKILIGEDHV BACU005598/1-862 VEFRAASVNS RKDKSLRVMS QKFVMLFLVS TPQIVSLEIA AKILIGEDHV ENSTTRP00000005390/1-866 VEFRAASVNS RKDKSLRVMS QKFVMLFLVS TPQIVSLEVA AKILIGEDHV 301 350 ENSBTAP00000023190/1-866 EDLDRSKFKT KIRRLYDIAN VLSSLDLIKK VHVTEERGRK PAFKWTGPEI ENSP00000434199/1-867 EDLDKSKFKT KIRRLYDIAN VLSSLDLIKK VHVTEERGRK PAFKWTGPEI bmy_03640T0/1-846 EDLDKSKFKT KIRRLYDIAN VLSSLDLIKK VHVTEERGRK PAFKWTGPEI BACU005598/1-862 EDLDKSKFKT KIRRLYDIAN VLSSLDLIKK VHVTEERGRK PAFKWTGPEI ENSTTRP00000005390/1-866 EDLDKSKFKT KIRRLYDIAN VLSSLDLIKK VHVTEERGRK PSFKWTGPEI 351 400 ENSBTAP00000023190/1-866 SPNPSGLSPV LPCAASDLEA RQSSKENCAK NLFSTRGKPN FTRHPSLIKL ENSP00000434199/1-867 SPNTSGSSPV IHFTPSDLEV RRSSKENCAK NLFSTRGKPN FTRHPSLIKL bmy_03640T0/1-846 SPNSSGLGPV LPFAASDLEG RRSSKENCAK NLFSTRGKPN FTRHPSLIKL BACU005598/1-862 SPNSSGLGPV LPFAASDLEG RRSSKENCAK NLFSTRGKPN FTRHPSLIKL ENSTTRP00000005390/1-866 SPNPSGLGPV LPFAPSDLEG RRSSKENCAK NLFSARGRPN FTRHPSLIKL 401 450 ENSBTAP00000023190/1-866 VKSIESDRRK INSAPSSPIK THKAESTQNS VPFRSKMAQL AAICKMQLEE ENSP00000434199/1-867 VKSIESDRRK INSAPSSPIK TNKAESSQNS APFPSKMAQL AAICKMQLEE bmy_03640T0/1-846 VKSIESDRRK INSAPTSPIK TNKAESSQNS VPFPSKMAQL AAICKMQLEE BACU005598/1-862 VKSIESDRRK INSAPTSPIK TNKAESSQNS VPFPSKMAQL AAICKMQLEE ENSTTRP00000005390/1-866 VKSIESDRRK INSAPTSPIK TNKAESSQNS VPFPSKMAQL AAICKMQLEE 451 500 ENSBTAP00000023190/1-866 QSSEPRKNVT VQLAGSGHCK SVAPLDTPAN AEPEMMAPSL IQPLGVVPLL ENSP00000434199/1-867 QSSESRQKVK VQLARSGPCK PVAPLDPPVN AEMELTAPSL IQPLGMVPLI bmy_03640T0/1-846 QSSDPRKKVK VQLARSGHCK PVAPLDTPAN AELEMTAPSL IQPLGVVPLI BACU005598/1-862 QSSDPRKKVK VQLARSGHCK PVAPLDTPAN AELEMTAPSL IQPLGVVPLI ENSTTRP00000005390/1-866 QSSEPRKKVK VQLARSGHCK PVAPLDTPAN AELEMTAPSL IQPLGVVPLI 501 550 ENSBTAP00000023190/1-866 PSPLSPAVPV ILPQTPSGTS YAIYLQPAQA -QTITPPPGL SPTVCPTTSS ENSP00000434199/1-867 PSPLSSAVPL ILPQAPSGPS YAIYLQPTQA HQSVTPPQGL SPTVCTTHSS bmy_03640T0/1-846 PSPLSSAVPV ILPQAPSGPS YAIYLQPAQA -QTMTPPQGL SPTVCPTPSS BACU005598/1-862 PSPLSSAVPM ILPQAPSGPS YAIYLQPAQA -QTMTPPQGL SPTVCPTPSS ENSTTRP00000005390/1-866 PSPLPSAVPV ILPQAPSGPS YAIYLQPAQA -QTMTPPQGL SPTVCPTPSS 551 600 ENSBTAP00000023190/1-866 NAMISEDSTD ATGENADSDA PKSSVSTRPG SLLPGPERQG AKNREREPAR ENSP00000434199/1-867 KATGSKDSTD ATTEKAANDT SKASASTRPG SLLPAPERQG AKSRTREPAG bmy_03640T0/1-846 NATRSKGSTD TTTENAANDA PKSSASARPG SLLPGLERQG TKNRDREPAG BACU005598/1-862 NATRSKGSTD TTTENAANDA PKSSASTRPG SLLPGLERQG TKNRDREPAG ENSTTRP00000005390/1-866 NATRSKGSTD TTTENAANDA PKSSASARPG SLLPGLERQG TKNRDREPAG 601 650 ENSBTAP00000023190/1-866 EKGSKRASML EDSGSKKKFK EDQKAPENVS TTLFPSGYLI PLTQCSTLGA ENSP00000434199/1-867 ERGSKRASML EDSGSKKKFK EDLKGLENVS ATLFPSGYLI PLTQCSSLGA bmy_03640T0/1-846 ERGSKRASML EDSGSKKKFK EDLKGLENVS TTLFPSGYLI PLTQCSTLGA BACU005598/1-862 ERGSKRASML EDSGSKKKFK EDLKGLENVS TTLFPSGYLI PLTQCSTLGA ENSTTRP00000005390/1-866 ERGSKRASML EDNGSKRKFK EDLKGLENVS TTLFPSGYLI PLTQCSTLGA 651 700 ENSBTAP00000023190/1-866 ESILSSNENS GTLSPNHSIY SSPIAGVIPV TSSELTAVNF PSFQVTPLKL ENSP00000434199/1-867 ESILSGKENS SALSPNHRIY SSPIAGVIPV TSSELTAVNF PSFHVTPLKL bmy_03640T0/1-846 ESILSSKESS GTLSPNHRIY SSSIAGVIPV TSSELTAVNF PSFHVTPLKL BACU005598/1-862 ESILSSKESS GTLSPNHRIY SSPIAGVIPV TSSELTAVNF PSFHVTPLKL ENSTTRP00000005390/1-866 ESILSSKESS GTLSPNHRIY SSPIAGVIPV TSSELTAVNF PSFHVTPLKL 701 750 ENSBTAP00000023190/1-866 MVSPTSMAAV PVGNSPALSS SHPLPIQNPS SAIVNFTLQH LGLISPGVQV ENSP00000434199/1-867 MVSPTSVAAV PVGNSPALAS SHPVPIQNPS SAIVNFTLQH LGLISPNVQL bmy_03640T0/1-846 MVSPTSVAAV PVGNSPALTS SHPVPVQNPS SAVVNFTLQH LGLISPGVQV BACU005598/1-862 MVSPTSVAAV PVGNSPALTS SHPVPVQNPS SAVVNFTLQH LGLISPGVQV ENSTTRP00000005390/1-866 MVSPTSVAAV PVGNSSALTS SHPVPVQNPS SAVVNFTLQH LGLISPGMQV 751 800 ENSBTAP00000023190/1-866 STSPGPGTIA VSPRIEAVSV TPENAGAEQG RATKCDASIL SQNQTNGQSF ENSP00000434199/1-867 SASPGSGIVP VSPRIESVNV APENAGTQQG RATNYDSPVP GQSQPNGQSV bmy_03640T0/1-846 SASPGPGTVP VSPRIEAVSV TPENAGTQQG RATKYDVSVL GQNQTNGQSV BACU005598/1-862 SASPGPGTVP VSPRIEAVSV TPENAGTQQG RATKYDVSVL GQNQTNGQSV ENSTTRP00000005390/1-866 SASPGPGTVP VSPRIEAVSV TPENAGTQQG RATKYDVSVL GQNQTNGQSV 801 850 ENSBTAP00000023190/1-866 AGTGAQQPVP VTPKGSQPVA ESFFRTPGGP TKPTGSPCTD FDGANYTSVG ENSP00000434199/1-867 AVTGAQQPVP VTPKGSQLVA ESFFRTPGGP TKPTSSSCMD FEGANKTSLG bmy_03640T0/1-846 AVTGAQQGER VRCSSC---- -AYTIMPNN- -------CVK VYFPLSESVT BACU005598/1-862 AVTGAQQPVP VTPKGSQLVA ESFFRTPGGP TKPAGSSCMD FDGANNTSIG ENSTTRP00000005390/1-866 AVTGAQQPVP VTPKGSQLVA ESFFRTPGGP TKPKGSSCVD FDGANNTSIG 851 900 ENSBTAP00000023190/1-866 TLLVPQRKLE VSVEDVH ENSP00000434199/1-867 TLFVPQRKLE VSTEDVH bmy_03640T0/1-846 GLM--QRSLQ LCTKKTL BACU005598/1-862 TLFVPQRKLE VSTEDVH ENSTTRP00000005390/1-866 TLFVPQRKLE VSTEDVH