KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:07 2014 Check: 00 .. Name: ENSP00000300179/1-841 Len: 850 Check: 6452 Weight: 1.00 Name: ENSBTAP00000023195/1-845 Len: 850 Check: 8968 Weight: 1.00 Name: ENSTTRP00000008422/1-841 Len: 850 Check: 1892 Weight: 1.00 Name: bmy_16108T0/1-847 Len: 850 Check: 6831 Weight: 1.00 Name: BACU012078/1-829 Len: 850 Check: 9442 Weight: 1.00 // 1 50 ENSP00000300179/1-841 MNLLYRKTKL EWRQHKEEEA KRSSSKEVAP AG-SAGPAAG QGPGVRVRDI ENSBTAP00000023195/1-845 MNLLYRKTKL EWRQHKEEEA KRSSSKEVAP AGPAAGPGAG PGPGVRVRDI ENSTTRP00000008422/1-841 MNLLYRKTKL EWRQHKEEEA KRSSSKEGAP AG-SSGPGAG PGPGVRVRDV bmy_16108T0/1-847 MNLLYRKTKL EWRQHKEEEA KRSSSKEGAP AG-SAGPGAG PGPGVRVRDV BACU012078/1-829 MNLLYRKTKL EWRQHKEEEA KRSSSKEGAP AG-SAGPGAG PGPGVRVRDV 51 100 ENSP00000300179/1-841 ASLRRSLRMG FMTMPASQEH TPHPCRSAMA PRSLSCHSVG SMDSVGGGPG ENSBTAP00000023195/1-845 ASLRRSLRMG FMTMPASQEH TPHPCRSAMA PRSLSCHSVG SMDSVGGGPG ENSTTRP00000008422/1-841 ASLRRSLRMG FMTMPASQEH TPHPCRSAMA PRSLSCHSVG SMDSVGGVPG bmy_16108T0/1-847 ASLRRSLRMG FMTMPASQEH TPHPCRSAMA PRSLSCHSVG SMDSVGGGPE BACU012078/1-829 ASLRRSLRMG FMTMPASQEH TPHPCRSAMA PRSLSCHSVG SMDSVGGGPE 101 150 ENSP00000300179/1-841 GASGGLTEDS STRRPPAKPR RHPSTKLSMV GPGSGAETPP SKKAGSQKPT ENSBTAP00000023195/1-845 GGSGGLTEDG GTRRPPAKPR RHPSTKLSMA GS--GAETPP SKKAGSQKPT ENSTTRP00000008422/1-841 GGGGGLTEDG STRRPPAKPR RHPSTKLSMA GP--GAETPP SKKAGSQKPT bmy_16108T0/1-847 GGRGGLTEDG STRRPPAKPR RHPSTKLSMA GP--GSETPP SKKAGSQKPT BACU012078/1-829 GGGGGLTEDG STRRPPAKPR RHPSTKLSMA GP--GSETPP SKKAGSQKPT 151 200 ENSP00000300179/1-841 PEGRESSRKV PPQKPRRSPN TQLSVSFDES CPPGPSPRGG NLPLQRLTRG ENSBTAP00000023195/1-845 PEGRESGRKV PPQKPRRSPN TQLSVSFDES CPPAPSPRGG NLPLQRLSRG ENSTTRP00000008422/1-841 PEGRESSRKV PPQKPRRSPN TQLSVSFDES CPPAASPRGG NPPLHRLSRG bmy_16108T0/1-847 PEGRESSRKV PPQKPRRSPN TQLSVSFDES CPPIASPRGG NPPLQRLSRG BACU012078/1-829 PEGRESSRKV PPQKPRRSPN TQLSVSFDES CPPIASPRGG NPPLQRLSRG 201 250 ENSP00000300179/1-841 SRVAGDPDVG AQEE-PVYIE MVGDVFRGGG RSGGGLAGPP LG-GGGPTPP ENSBTAP00000023195/1-845 SCMAGDPEAG AQEEEPVYIE MVGDVFKGGG RSGGGLTGPP LG-GGGPTPP ENSTTRP00000008422/1-841 SCVAGDPEVG AQEEEPVYIE MVGDVFRGGG RSGGGLTGPP LGGGGGPTPT bmy_16108T0/1-847 SCVAGDPEVG AQEEEPVYIE MVGDVFRGGG RSGGGLTGPP LGGGGGPTPT BACU012078/1-829 SCVAGDPEVG AQEEEPVYIE MVGDVFRGGG RSGGGLTGPP LGGGGGPTPT 251 300 ENSP00000300179/1-841 AGADSDSEES EAIYEEMKYP LPEEAGEGRA NGPPPLTATS PPQQPHALPP ENSBTAP00000023195/1-845 VGADSDSDES EAIYEEMKYP LPEEAGEGRA NGAPALTAAS TPHQPHALQP ENSTTRP00000008422/1-841 AGADSDSEES EAIYEEMKYP LPEEAGEGRA NGAPPLTASS TPHQPHALQL bmy_16108T0/1-847 AGADSDSEES EAIYEEMKYP LPEEAGEGRA NGAPPLTASS TPHQPHALQL BACU012078/1-829 AGADSDSEES EAIYEEMKYP LPEEAGEGRA NGAPPLMASS TPHQPHALQL 301 350 ENSP00000300179/1-841 HAHRRPASAL PSRRDGTPTK TTPCEIPPPF PNLLQHRPPL LAFPQAKSAS ENSBTAP00000023195/1-845 HTHRRPASAL PSRRDGTPTK TTPCEIPPPF PNLLQHRPPL LAFPQAKSAS ENSTTRP00000008422/1-841 HTQRRPASAL PSRREGTPTK TTPCE-PPPF P--LQHRPPL LAFPQAKPAS bmy_16108T0/1-847 HTQRRPASAL PSRREGTPTK TTPCEIPPPF PNLLQHRPPL LAFPQAKPAS BACU012078/1-829 HTQRRPASAL PSRREGTPTK TTPCEIPPPF PNLLQHRPPL LAFPQAKPAS 351 400 ENSP00000300179/1-841 RTPGDGVSRL PVLCHSKEPA GSTPAPQVPA RERETPPPPP PPPAANLLLL ENSBTAP00000023195/1-845 RTPGDGVSRL PVLCHSKEPA GSTPAPQVPA RERETPPLPP PPPAANLLLL ENSTTRP00000008422/1-841 RAPGDGVSRL PVLCHSKEPA GSTPAPQVPA RERETPPPPP PPPAANLLLL bmy_16108T0/1-847 RAPGDGVSRL PVLCHSKEPA GSTPAPQVPA RERETPPPPP PPPAANLLLL BACU012078/1-829 RAPGDGVSRL PVLCHSKEPA GSTPAPQVPA RERETPPPPP PPPAANLLLL 401 450 ENSP00000300179/1-841 GPSGRARSHS TPLPPQGSGQ PRGERELPNS HSMICPKAAG APAAPPAPAA ENSBTAP00000023195/1-845 GPSGRARSHS TPLPPQGSGQ PRGERELPNS HSMICPKAAG APAAPPAPAA ENSTTRP00000008422/1-841 GPSGRARSHS TPLPPQGSGQ PRGERELPNS HSMICPKAAG VPAAPPAPAA bmy_16108T0/1-847 GPSGRARSHS TPLPPQGSGQ PRGERELPNS HSMICPKVAG VPAAPPAPAA BACU012078/1-829 GPSGRARSHS TPLPPQGSGQ PRGERELPNS HSMICPKVAG VPAAPPAPAA 451 500 ENSP00000300179/1-841 LLPGPPKDKA VSYTMVYSAV KVTTHSVLPA GPPLGAGEPK TEKEISVLHG ENSBTAP00000023195/1-845 LLPGAPKDKA VSYTMVYSAV KVTTHSVLPA GPPLGAGEPK TEKEIAVLHG ENSTTRP00000008422/1-841 LLPGPPKDKA VSYTMVYSAV KVTTHSVLPT GPPLGAGEPK TEKEISVLHG bmy_16108T0/1-847 LLPGLPKDKA VSYTMVYSAV KVTTHSVLPT GPPLGAGEPK TEKEISVLHG BACU012078/1-829 LLPGPPKDKA VSYTMVYSAV KVTTHSVLPT GPPLGAGEPK TEKEISVLHG 501 550 ENSP00000300179/1-841 MLCTSSRPPV PGKTSPHGGA MGAAAGVLHH RGCLASPHSL PDPTVGPLTP ENSBTAP00000023195/1-845 MLCTSSRPPV PGKSSPHSGA LGAAAGVLHH RACLASPHSL PDPTTGPLTP ENSTTRP00000008422/1-841 MLCTRSRPPV PGKSSPHGGA MGAAAGVLHH RACLASPHSL PDPTAGPLTP bmy_16108T0/1-847 MLCTRSRPPV PGKSSPHGGA MGAAAGVLHH RACLASPHSL PDPTAGPLTP BACU012078/1-829 MLCTRSRPPV PGKSSPHGGA MGAAAGVLHH RACLASPHSL PDPTAGPLTP 551 600 ENSP00000300179/1-841 LWTYPATAAG LKRPPAYESL KAGGVLNKGC GVGAPSPMVK IQLQEQGTDG ENSBTAP00000023195/1-845 LWTYPAAAAG LKRPPAYESL KAGGVLNKGC GMGAPSPMVK IQLQEQGTDG ENSTTRP00000008422/1-841 LWTYPAAAAG LKRPPAYESL KAGGVLNKGC GMGAPSPMVK IQLQEQGTDG bmy_16108T0/1-847 LWTYPAAAAG LKRPPAYESL KAGGVLNKGC GMGAPSPVVK IQLQEQGTDG BACU012078/1-829 LWTYPAAAAG LKRPPAYESL KAGGVLNKGC GMGAPSPVVK IQLQEQGTDG 601 650 ENSP00000300179/1-841 GAFASISCAH VIASAGTPEE EEEEVGAATF GAGWALQRKV LYGGRKAKEL ENSBTAP00000023195/1-845 GAFASISCAH VIASAGTP-E EEEEMGASTF GAGWALQRKV LYGGRKAKEL ENSTTRP00000008422/1-841 GAFASLSCAH VIASAGTPEE EEEEMGASTF GAGWALQRKV LYGGRKAKEL bmy_16108T0/1-847 GAFASLSCAH VIASAGTPEE EEEEMGASTF GAGWALQRKV LYGGRKAKEL BACU012078/1-829 GAFASLSCAH VIASAGTPEE EEEEMGASTF GAGWALQRKV LYGGRKAKEL 651 700 ENSP00000300179/1-841 D-KVEDGARA WNGSAEGPGK VEREDRGPGT SGIPVRSQGA EGLLARIHH- ENSBTAP00000023195/1-845 D-KIEDGARA WNGSAEGLGK VEHEDRGPLA SGIPVRSQGA EGLLARIHHG ENSTTRP00000008422/1-841 D-KVEDSVQA WNGSAEGAGK VEREDRGSVA SGIPVRSQGA EGLLARIHHG bmy_16108T0/1-847 DTEVEDSVRA WNGSAEGPSK VEHEDRGSMA SGIPVRSQGA EGLLARIHHG BACU012078/1-829 DTEVEDSVRA WNGSTEGPSK LEHEDRGSVA SGIPVRSQGA EGLLARIHHG 701 750 ENSP00000300179/1-841 GDRGGSRTAL PIPCQTFPAC HRNGDFTGGY RLGRSASTSG VRQVVLHTPR ENSBTAP00000023195/1-845 GDRGGGRTAL PIPCQTFPAC HRNGDFTGGY RLGRSASTSG VRQAALHTPR ENSTTRP00000008422/1-841 GDRGGSRPAL PIPCQTFPAC HRNGDFTGGY RLGRSASTSG VRQAALHTPR bmy_16108T0/1-847 GDRGGSRTAL PIPCQTFPAC HRNGDFTGGY RLGRSASTSG VRQAALHTPR BACU012078/1-829 GDRGGSRTAL PIPCQTFPAC HRNGDFTGGY RLGRSASTSG VRQAALHTPR 751 800 ENSP00000300179/1-841 PCSQPRDALS QPHPA----L PLPLPLPPQP ARERDGKLLE VIERKRCVCK ENSBTAP00000023195/1-845 PCSQPRDAPS QTQPALPLPL PLPLPLPPQP ARERDGKLLE VIERKRCVCK ENSTTRP00000008422/1-841 PCSQPRDALS QIQPA--LPL PLPLPLPPQA TRERDGKLLE VIERKRCVCK bmy_16108T0/1-847 PCSQPRDAPS QTQPALPLPL PLPLPLPPQA ARERDGKLLE VIERKRCVCK BACU012078/1-829 PCSQPRDAPS ---------- --------QA ARERDGKLLE VIERKRCVCK 801 850 ENSP00000300179/1-841 EIKARHRPDR GLCKQESMPI LPSWRRGPEP RKSGTPPCRR QHTVLWDTAI ENSBTAP00000023195/1-845 EIKARHRPDR GLCKQESMPI LPSWRRGPEP RKSGTPPCRR QHTVLWDTAI ENSTTRP00000008422/1-841 EIKARHRPDR GLCKQESMPI LPSWRRGPEP RKSGTPPCRR QHTVLWDTAI bmy_16108T0/1-847 EIKARHRPDR GLCKQESMPI LPSWRRGPEP RKSGTPPCRR QHTVLWDTAI BACU012078/1-829 EIKARHRPDR GLCKQESMPI LPSWRGGPEP RKSGTPPCRR QHTVLWDTAI