KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:10 2014 Check: 00 .. Name: bmy_22123T0/1-346 Len: 502 Check: 2662 Weight: 1.00 Name: ENSP00000378058/1-493 Len: 502 Check: 6686 Weight: 1.00 Name: ENSBTAP00000023206/1-498 Len: 502 Check: 7716 Weight: 1.00 Name: BACU013858/1-498 Len: 502 Check: 9918 Weight: 1.00 Name: ENSTTRP00000001367/1-489 Len: 502 Check: 4143 Weight: 1.00 // 1 50 bmy_22123T0/1-346 ---------- ---------- ---------- ---------- ---------- ENSP00000378058/1-493 MLKALFLTML TLALVKSQDT EETITYTQCT DGYEWDPVRQ QCKDIDECDI ENSBTAP00000023206/1-498 MLKALFLTML TLALVKSQDT EETITYTQCT DGYEWDPVRQ QCKDIDECDI BACU013858/1-498 MVKALFLIML TLALVKSQDT EETITYTQCT DGYEWDPIRQ QCKDIDECDI ENSTTRP00000001367/1-489 MVKALFLIML TLALVKSQDT EETITYTQCT DGYEWDPVRQ QCKDIDECDI 51 100 bmy_22123T0/1-346 ---------- MMAKWRNYQH LHNRLKL--- ---------- ---------- ENSP00000378058/1-493 VPDACKGGMK CVNHYGGYLC LPKTAQIIVN NEQPQQETQP AEG------- ENSBTAP00000023206/1-498 VPDACKGGMK CVNHYGGYLC LPKTAQIIVN NEQPQQETPA AEGAGAAANA BACU013858/1-498 VPDACKGGMK CVNHYGGYLC LPKTAQIIVN NEQPQQETPS AEGAGAATNA ENSTTRP00000001367/1-489 VPDACKGGMK CVNHYGGYLC LPKTAQIIVN NEQPQQETPA AEG------- 101 150 bmy_22123T0/1-346 ---------- ---------- ------FLCC MSL------- ---------- ENSP00000378058/1-493 --TSGATTGV VAASSMATSG VLPGGGFVAS AAAVAGPEMQ TGRNNFVIRR ENSBTAP00000023206/1-498 AATSSTGTGG VAATGVAASG VVPGGGFVAS AAA----EVQ TGRNNFVTRR BACU013858/1-498 AVTSGTGTGG VAASGMAASG AVPGGGFVAS AAA----EVQ TGRNNFVIRR ENSTTRP00000001367/1-489 --TSSTGTGG VAASGMAASG AVPGGGFVAS AAA----EVQ TGRNNFVIRR 151 200 bmy_22123T0/1-346 ---------- ---------- ---------- TDIDECTAGT HNCRADQVCI ENSP00000378058/1-493 NPADPQRIPS NPSHRIQCAA GYEQSEHNVC QDIDECTAGT HNCRADQVCI ENSBTAP00000023206/1-498 NPSDPQRIPI NPSHRIQCAT GYEQSEHNVC QDIDECTAGT HNCRADQVCI BACU013858/1-498 NPADPQRIPS NPSHRIQCAT GYEQSEHNVC QDIDECTAGT HNCRADQVCI ENSTTRP00000001367/1-489 NPADPQRIPS NPSHRIQCAT GYEQSEHNVC QDIDECTAGT HNCRADQVCI 201 250 bmy_22123T0/1-346 NLRGSFTCQC PPGYQKRGEQ CVDIDECTIP PYCHQRCVNT PGSFYCQCSP ENSP00000378058/1-493 NLRGSFACQC PPGYQKRGEQ CVDIDECTIP PYCHQRCVNT PGSFYCQCSP ENSBTAP00000023206/1-498 NLRGSFACQC PPGYQKRGEQ CVDVDECTIP PYCHQRCVNT PGSFYCQCNP BACU013858/1-498 NLRGSFTCQC PPGYQKRGEQ CVDIDECTVP PYCHQRCVNT PGSFYCQCSP ENSTTRP00000001367/1-489 NLRGSFTCQC PPGYQKRGEQ CVDIDECTIP PYCHQRCVNT PGSFYCQCSP 251 300 bmy_22123T0/1-346 GFQLAANNYT CVDINECDAS NQCAQQCYNI LGSFICQCNQ GYELSSDRLN ENSP00000378058/1-493 GFQLAANNYT CVDINECDAS NQCAQQCYNI LGSFICQCNQ GYELSSDRLN ENSBTAP00000023206/1-498 GFQLAANNYT CVDINECDAS NQCAQQCYNI LGSFICQCNQ GYELSSDRLN BACU013858/1-498 GFQLAANNYT CVDINECDAS NQCAQQCYNI LGSFICQCNQ GYELSSDRLN ENSTTRP00000001367/1-489 GFQLAANNYT CVDINECDAS NQCAQQCYNI LGSFICQCNQ GYELSSDRLN 301 350 bmy_22123T0/1-346 CEDIDECRTS SYLCQYQCVN EPGKFSCMCP QGYQVVRSRT CQDINECETT ENSP00000378058/1-493 CEDIDECRTS SYLCQYQCVN EPGKFSCMCP QGYQVVRSRT CQDINECETT ENSBTAP00000023206/1-498 CEDIDECRTS SYLCQYQCVN EPGKFSCMCP QGYQVVRGRT CQDINECETT BACU013858/1-498 CEDIDECRTS SYLCQYQCVN EPGKFSCMCP QGYQVVRSRT CQDINECETT ENSTTRP00000001367/1-489 CEDIDECRTS SYLCQYQCVN EPGKFSCMCP QGYQVVRSRT CQDINECETT 351 400 bmy_22123T0/1-346 NECREDEMCW NYHGGFRCYP RNPCQDPYVL TSENRCVCPV SNALCRELPQ ENSP00000378058/1-493 NECREDEMCW NYHGGFRCYP RNPCQDPYIL TPENRCVCPV SNAMCRELPQ ENSBTAP00000023206/1-498 NECREDEMCW NYHGGFRCYP RNPCQDPYVL TSENRCVCPV SNAMCREIPQ BACU013858/1-498 NECREDEMCW NYHGGFRCYP RNPCQDPYIL TSENRCVCPV SNALCRELPQ ENSTTRP00000001367/1-489 NECREDEMCW NYHGGFRCYP RNPCQDPYVL TSENRCVCPV SNALCRELPQ 401 450 bmy_22123T0/1-346 SIVYKYMSIR SDRSVPSDIF QIQATTIYPN TINTFRIKSG NENREFYLRQ ENSP00000378058/1-493 SIVYKYMSIR SDRSVPSDIF QIQATTIYAN TINTFRIKSG NENGEFYLRQ ENSBTAP00000023206/1-498 SIVYKYMSIR SDRSVPSDIF QIQATTIYAN TINTFRIKSG NENGEFYLRQ BACU013858/1-498 SIVYKYMSIR SDRSVPSDIF QIQATTIYPN TINTFRIKSG NENREFYLRQ ENSTTRP00000001367/1-489 SIVHKYMSIR SDRSVPSDIF QIQATTIYPN TINTFRIKSG NENREFYLRQ 451 500 bmy_22123T0/1-346 TSPVSAMLVL VKSLSGPREY IVDLEMLTVN SMGTFRTSSV LRLTIIVGPF ENSP00000378058/1-493 TSPVSAMLVL VKSLSGPREH IVDLEMLTVS SIGTFRTSSV LRLTIIVGPF ENSBTAP00000023206/1-498 TSPVSAMLVL VKSLSGPREY IVDLEMVTVN SIGTFRTSSV LRLTIIVGPF BACU013858/1-498 TSPVSAMLVL VKSLSGPREY IVDLEMLTVN SMGTFRTSSV LRLTIIVGPF ENSTTRP00000001367/1-489 TSPVSAMLVL VKSLSGPREY IVDLEMLTVN SMGTFRTSSV LRLTIIVGPF 501 550 bmy_22123T0/1-346 SF ENSP00000378058/1-493 SF ENSBTAP00000023206/1-498 SF BACU013858/1-498 SF ENSTTRP00000001367/1-489 SF