KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:20:10 2014 Check: 00 ..
Name: ENSP00000463978/1-465 Len: 696 Check: 1385 Weight: 1.00
Name: ENSBTAP00000023209/1-461 Len: 696 Check: 4208 Weight: 1.00
Name: BACU011643/1-584 Len: 696 Check: 3623 Weight: 1.00
Name: bmy_02229T0/1-566 Len: 696 Check: 1970 Weight: 1.00
Name: ENSTTRP00000008939/1-461 Len: 696 Check: 3542 Weight: 1.00
//
1 50
ENSP00000463978/1-465 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000023209/1-461 ---------- ---------- ---------- ---------- ----------
BACU011643/1-584 ---------- ---------- ---------- ---------- ----------
bmy_02229T0/1-566 MLLRTLARES VWSGVCGVPL TGWWCPYDKA DLLQGGPRRD LAGVEGASSA
ENSTTRP00000008939/1-461 ---------- ---------- ---------- ---------- ----------
51 100
ENSP00000463978/1-465 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000023209/1-461 ---------- ---------- ---------- ---------- ----------
BACU011643/1-584 ---------- ---------- ---------- ---------- ----------
bmy_02229T0/1-566 SSRELVYSSL LVGRHSFSGQ QATGSNKPSL XHACSKVYSV LGTASARDAE
ENSTTRP00000008939/1-461 ---------- ---------- ---------- ---------- ----------
101 150
ENSP00000463978/1-465 -----MGGAV VDEGPTGVKA PDGGWGWAVL FGCFVITGFS YAFPKAVSVF
ENSBTAP00000023209/1-461 -----MGGAV IDEGPTGIKA PDGGWGWAIL WGCFVITGFS YAFPKAVSVF
BACU011643/1-584 -----MGGAV VDEGPTGVKA PDGGWGWAIL WGCFVITGFS YAFPKAVSVF
bmy_02229T0/1-566 PALLAMGGAV VDEGPTGVKA PDGGWGWAIL WGCFVITGFS YAFPKAVSVF
ENSTTRP00000008939/1-461 -----MGGAV VEEGPTGVKA PDGGWGWAIL WGCFVITGFS YAFPKAVSVF
151 200
ENSP00000463978/1-465 FKELIQEFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMLVGG
ENSBTAP00000023209/1-461 FKELMREFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMLAGG
BACU011643/1-584 FKELIREFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMFTGG
bmy_02229T0/1-566 FKELIREFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMFTGG
ENSTTRP00000008939/1-461 FKELIREFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMFTGG
201 250
ENSP00000463978/1-465 LFASLGMVAA SFCRSIIQVY LTTGVITGLG LALNFQPSLI MLNRYFSKRR
ENSBTAP00000023209/1-461 LLASLGMVSA SFCGSIIQLY LTTGVLTGLG LALNFQPSLI MLNRYFNKRR
BACU011643/1-584 LLASLGMVSA SFCGSIIQLY LTAGVITGLG LALNFQPSLI MLNRYFNKRR
bmy_02229T0/1-566 LLASLGMVSA SFCGSIIQLY LTTGVITGLG LALNFQPSLI MLNRYFNKRR
ENSTTRP00000008939/1-461 LLASLGMVSA SFCGSIIQLY FTTGVITGLG LALNFQPSLI MLNRYFNKRR
251 300
ENSP00000463978/1-465 PMANGLAAAG SPVFLCALSP LGQLLQDRYG WRGGFLILGG LLLNCCVCAA
ENSBTAP00000023209/1-461 PMANGLAAAG SPVFLCALSP LGQVLQDHYG WRGGFLILGG LLLNCCVCAA
BACU011643/1-584 PMANGLAAAG SPVFLCALSP LGQVLQDHYG WRGGFLILGG LLLNCCVCAA
bmy_02229T0/1-566 PMANGLAAAG SPVFLCALSP LGQVLQDHYG WRGGFLILGG LLLNCCVCAA
ENSTTRP00000008939/1-461 PMANGLAAAG SPVFLCALSP LGQVLQDHYG WRGGFLILGG LLLNCCVCAA
301 350
ENSP00000463978/1-465 LMRPLV---V TAQPG----- ---------- ---------- ----------
ENSBTAP00000023209/1-461 LMRPLEAPRQ SSGSG----- ---------- ---------- ----------
BACU011643/1-584 LMRPLEAPRL GSGSGPGPQR PSRRLLDLSV FRDRGFVIYA LAASIMVLGL
bmy_02229T0/1-566 LMRPLEAPRL GSGSG----- ---------- ---------- ----------
ENSTTRP00000008939/1-461 LMRPLEAPRL GSGSG----- ---------- ---------- ----------
351 400
ENSP00000463978/1-465 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000023209/1-461 ---------- ---------- ---------- ---------- ----------
BACU011643/1-584 FVPPVFVVSY AKDLGVPDTQ AAFLLTILGF IDIFARPTAG FITGLKKVRP
bmy_02229T0/1-566 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000008939/1-461 ---------- ---------- ---------- ---------- ----------
401 450
ENSP00000463978/1-465 ---------- ---------- ---------- --------SG PPRPSRRLLD
ENSBTAP00000023209/1-461 ---------- ---------- ---------- --------PA PQRPPRRLLD
BACU011643/1-584 YSVYLFSFAM FFNLLLNCCV CAALRRPLEA PRLGSGSGPG PQRPSRRLLD
bmy_02229T0/1-566 ---------- ---------- ---------- --------PG PQRPSRRLLD
ENSTTRP00000008939/1-461 ---------- ---------- ---------- --------PG PQRPPRRLLD
451 500
ENSP00000463978/1-465 LSVFRDRGFV LYAVAASVMV LGLFVPPVFV VSYAKDLGVP DTKAAFLLTI
ENSBTAP00000023209/1-461 LSVFRDRGFV IYALAASIMV LGLFVPPVFV VSYAKDLGVP DTQAAFLLTI
BACU011643/1-584 LSVFRDRGFV IYALAASIMV LGLFVPPVFV VSYAKDLGVP DTQAAFLLTI
bmy_02229T0/1-566 LSVFRDRGFV IYALAASIMV LGLFVPPVFV VSYAKDLGVP DTQAAFLLTI
ENSTTRP00000008939/1-461 LSVFRDRGFV IYALAASIMV LGLFVPPVFV VSYAKDLGVP DTQAAFLLTI
501 550
ENSP00000463978/1-465 LGFIDIFARP AAGFVAGLGK VRPYSVYLFS FSMFFNGLAD LAGSTAGDYG
ENSBTAP00000023209/1-461 LGFVDIFARP TAGFITGLKK VRPYSVYLFS FAMFFNGFAD LTGSTASNYG
BACU011643/1-584 LGFIDIFARP TAGFITGLKK VRPYSVYLFS FAMFFNGFTD LTGSTASDYG
bmy_02229T0/1-566 LGFVDIFARP TAGFITGLKK VRPYSVYLFS FAMFFNGFTD LTGSTASDYG
ENSTTRP00000008939/1-461 LGFIDIFARP TAGFITGLKK VRPYSVYLFS FAMFFNGFTD LTGSTASDYG
551 600
ENSP00000463978/1-465 GLVVFCIFFG ISYGMVGALQ FEVLMAIVGT HKFSSAIGLV LLMEAVAVLV
ENSBTAP00000023209/1-461 GLVVFCIFFG ISYGMVGALQ FEVLMAIVGT QKFSSAIGLV LLLEAIAVLI
BACU011643/1-584 GLVVFCIFFG ISYGMVGALQ FEVLMAIVGT QKFSSAIGLV LLLEAIAVLI
bmy_02229T0/1-566 GLVVFCIFFG MSYGMVGALQ FEVLMAIVGT QKFSSAIGLV LLLEAIAVLI
ENSTTRP00000008939/1-461 GLVVFCIFFG ISYGMVGALQ FEVLMAIVGT QKFSSAIGLV LLLEAIAVLI
601 650
ENSP00000463978/1-465 GPPSGGKLLD ATHVYMYVFI LAGAEVLTSS LILLLGNFFC IRKKPKEPQP
ENSBTAP00000023209/1-461 GPPSGGKLLD ATHVYQYVFI LAGAEVLASS LVLVLGNFFC IRKRPE----
BACU011643/1-584 GPPSGGKLLD ATHVYQYVFV LAGAEVLASS IVLVLGNFFC IGKRPE----
bmy_02229T0/1-566 GPPSGGKLLD ATHVYQYVFV LAGAEVLASS IVLVLGNFFC IGKRPE----
ENSTTRP00000008939/1-461 GPPSGGKLLD ATHVYQYVFV LAGAEVLASS LVLVLGNFLC IGKRPE----
651 700
ENSP00000463978/1-465 EVAAAEEEKL HKPPADSGVD LREVEHFLKA EPEKNGEVVH TPETSV
ENSBTAP00000023209/1-461 ---TATEEER HKPPEDVRVD SREVEQFLKT EPEKNGEVVH TPETSV
BACU011643/1-584 ---AATEEEQ QKPPEDVRVD SREVEHFLKT EPEKNGEVVH TPETSV
bmy_02229T0/1-566 ---AATEEEH HKPPEDVRVD SREVEHFLKT EPEKNGEVVH TPETSV
ENSTTRP00000008939/1-461 ---AATEEEH HKPPEDVKVD SREVEQFLKT EPEKNGEVVH TPETSV