KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:10 2014 Check: 00 .. Name: ENSP00000463978/1-465 Len: 696 Check: 1385 Weight: 1.00 Name: ENSBTAP00000023209/1-461 Len: 696 Check: 4208 Weight: 1.00 Name: BACU011643/1-584 Len: 696 Check: 3623 Weight: 1.00 Name: bmy_02229T0/1-566 Len: 696 Check: 1970 Weight: 1.00 Name: ENSTTRP00000008939/1-461 Len: 696 Check: 3542 Weight: 1.00 // 1 50 ENSP00000463978/1-465 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023209/1-461 ---------- ---------- ---------- ---------- ---------- BACU011643/1-584 ---------- ---------- ---------- ---------- ---------- bmy_02229T0/1-566 MLLRTLARES VWSGVCGVPL TGWWCPYDKA DLLQGGPRRD LAGVEGASSA ENSTTRP00000008939/1-461 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000463978/1-465 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023209/1-461 ---------- ---------- ---------- ---------- ---------- BACU011643/1-584 ---------- ---------- ---------- ---------- ---------- bmy_02229T0/1-566 SSRELVYSSL LVGRHSFSGQ QATGSNKPSL XHACSKVYSV LGTASARDAE ENSTTRP00000008939/1-461 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000463978/1-465 -----MGGAV VDEGPTGVKA PDGGWGWAVL FGCFVITGFS YAFPKAVSVF ENSBTAP00000023209/1-461 -----MGGAV IDEGPTGIKA PDGGWGWAIL WGCFVITGFS YAFPKAVSVF BACU011643/1-584 -----MGGAV VDEGPTGVKA PDGGWGWAIL WGCFVITGFS YAFPKAVSVF bmy_02229T0/1-566 PALLAMGGAV VDEGPTGVKA PDGGWGWAIL WGCFVITGFS YAFPKAVSVF ENSTTRP00000008939/1-461 -----MGGAV VEEGPTGVKA PDGGWGWAIL WGCFVITGFS YAFPKAVSVF 151 200 ENSP00000463978/1-465 FKELIQEFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMLVGG ENSBTAP00000023209/1-461 FKELMREFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMLAGG BACU011643/1-584 FKELIREFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMFTGG bmy_02229T0/1-566 FKELIREFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMFTGG ENSTTRP00000008939/1-461 FKELIREFGI GYSDTAWISS ILLAMLYGTG PLCSVCVNRF GCRPVMFTGG 201 250 ENSP00000463978/1-465 LFASLGMVAA SFCRSIIQVY LTTGVITGLG LALNFQPSLI MLNRYFSKRR ENSBTAP00000023209/1-461 LLASLGMVSA SFCGSIIQLY LTTGVLTGLG LALNFQPSLI MLNRYFNKRR BACU011643/1-584 LLASLGMVSA SFCGSIIQLY LTAGVITGLG LALNFQPSLI MLNRYFNKRR bmy_02229T0/1-566 LLASLGMVSA SFCGSIIQLY LTTGVITGLG LALNFQPSLI MLNRYFNKRR ENSTTRP00000008939/1-461 LLASLGMVSA SFCGSIIQLY FTTGVITGLG LALNFQPSLI MLNRYFNKRR 251 300 ENSP00000463978/1-465 PMANGLAAAG SPVFLCALSP LGQLLQDRYG WRGGFLILGG LLLNCCVCAA ENSBTAP00000023209/1-461 PMANGLAAAG SPVFLCALSP LGQVLQDHYG WRGGFLILGG LLLNCCVCAA BACU011643/1-584 PMANGLAAAG SPVFLCALSP LGQVLQDHYG WRGGFLILGG LLLNCCVCAA bmy_02229T0/1-566 PMANGLAAAG SPVFLCALSP LGQVLQDHYG WRGGFLILGG LLLNCCVCAA ENSTTRP00000008939/1-461 PMANGLAAAG SPVFLCALSP LGQVLQDHYG WRGGFLILGG LLLNCCVCAA 301 350 ENSP00000463978/1-465 LMRPLV---V TAQPG----- ---------- ---------- ---------- ENSBTAP00000023209/1-461 LMRPLEAPRQ SSGSG----- ---------- ---------- ---------- BACU011643/1-584 LMRPLEAPRL GSGSGPGPQR PSRRLLDLSV FRDRGFVIYA LAASIMVLGL bmy_02229T0/1-566 LMRPLEAPRL GSGSG----- ---------- ---------- ---------- ENSTTRP00000008939/1-461 LMRPLEAPRL GSGSG----- ---------- ---------- ---------- 351 400 ENSP00000463978/1-465 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023209/1-461 ---------- ---------- ---------- ---------- ---------- BACU011643/1-584 FVPPVFVVSY AKDLGVPDTQ AAFLLTILGF IDIFARPTAG FITGLKKVRP bmy_02229T0/1-566 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008939/1-461 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000463978/1-465 ---------- ---------- ---------- --------SG PPRPSRRLLD ENSBTAP00000023209/1-461 ---------- ---------- ---------- --------PA PQRPPRRLLD BACU011643/1-584 YSVYLFSFAM FFNLLLNCCV CAALRRPLEA PRLGSGSGPG PQRPSRRLLD bmy_02229T0/1-566 ---------- ---------- ---------- --------PG PQRPSRRLLD ENSTTRP00000008939/1-461 ---------- ---------- ---------- --------PG PQRPPRRLLD 451 500 ENSP00000463978/1-465 LSVFRDRGFV LYAVAASVMV LGLFVPPVFV VSYAKDLGVP DTKAAFLLTI ENSBTAP00000023209/1-461 LSVFRDRGFV IYALAASIMV LGLFVPPVFV VSYAKDLGVP DTQAAFLLTI BACU011643/1-584 LSVFRDRGFV IYALAASIMV LGLFVPPVFV VSYAKDLGVP DTQAAFLLTI bmy_02229T0/1-566 LSVFRDRGFV IYALAASIMV LGLFVPPVFV VSYAKDLGVP DTQAAFLLTI ENSTTRP00000008939/1-461 LSVFRDRGFV IYALAASIMV LGLFVPPVFV VSYAKDLGVP DTQAAFLLTI 501 550 ENSP00000463978/1-465 LGFIDIFARP AAGFVAGLGK VRPYSVYLFS FSMFFNGLAD LAGSTAGDYG ENSBTAP00000023209/1-461 LGFVDIFARP TAGFITGLKK VRPYSVYLFS FAMFFNGFAD LTGSTASNYG BACU011643/1-584 LGFIDIFARP TAGFITGLKK VRPYSVYLFS FAMFFNGFTD LTGSTASDYG bmy_02229T0/1-566 LGFVDIFARP TAGFITGLKK VRPYSVYLFS FAMFFNGFTD LTGSTASDYG ENSTTRP00000008939/1-461 LGFIDIFARP TAGFITGLKK VRPYSVYLFS FAMFFNGFTD LTGSTASDYG 551 600 ENSP00000463978/1-465 GLVVFCIFFG ISYGMVGALQ FEVLMAIVGT HKFSSAIGLV LLMEAVAVLV ENSBTAP00000023209/1-461 GLVVFCIFFG ISYGMVGALQ FEVLMAIVGT QKFSSAIGLV LLLEAIAVLI BACU011643/1-584 GLVVFCIFFG ISYGMVGALQ FEVLMAIVGT QKFSSAIGLV LLLEAIAVLI bmy_02229T0/1-566 GLVVFCIFFG MSYGMVGALQ FEVLMAIVGT QKFSSAIGLV LLLEAIAVLI ENSTTRP00000008939/1-461 GLVVFCIFFG ISYGMVGALQ FEVLMAIVGT QKFSSAIGLV LLLEAIAVLI 601 650 ENSP00000463978/1-465 GPPSGGKLLD ATHVYMYVFI LAGAEVLTSS LILLLGNFFC IRKKPKEPQP ENSBTAP00000023209/1-461 GPPSGGKLLD ATHVYQYVFI LAGAEVLASS LVLVLGNFFC IRKRPE---- BACU011643/1-584 GPPSGGKLLD ATHVYQYVFV LAGAEVLASS IVLVLGNFFC IGKRPE---- bmy_02229T0/1-566 GPPSGGKLLD ATHVYQYVFV LAGAEVLASS IVLVLGNFFC IGKRPE---- ENSTTRP00000008939/1-461 GPPSGGKLLD ATHVYQYVFV LAGAEVLASS LVLVLGNFLC IGKRPE---- 651 700 ENSP00000463978/1-465 EVAAAEEEKL HKPPADSGVD LREVEHFLKA EPEKNGEVVH TPETSV ENSBTAP00000023209/1-461 ---TATEEER HKPPEDVRVD SREVEQFLKT EPEKNGEVVH TPETSV BACU011643/1-584 ---AATEEEQ QKPPEDVRVD SREVEHFLKT EPEKNGEVVH TPETSV bmy_02229T0/1-566 ---AATEEEH HKPPEDVRVD SREVEHFLKT EPEKNGEVVH TPETSV ENSTTRP00000008939/1-461 ---AATEEEH HKPPEDVKVD SREVEQFLKT EPEKNGEVVH TPETSV