KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:11 2014 Check: 00 .. Name: ENSP00000258145/1-552 Len: 577 Check: 2417 Weight: 1.00 Name: ENSBTAP00000023218/1-560 Len: 577 Check: 7625 Weight: 1.00 Name: ENSTTRP00000001510/1-552 Len: 577 Check: 648 Weight: 1.00 Name: bmy_21147T0/1-552 Len: 577 Check: 149 Weight: 1.00 Name: BACU008187/1-576 Len: 577 Check: 5217 Weight: 1.00 // 1 50 ENSP00000258145/1-552 MRLLPLAPGR LRRGSPRHLP SCSPAL---- ---------- ---------- ENSBTAP00000023218/1-560 MRLLSLAPDR PRRGGPRHLT SGSPALPPPP PLL------- ---------- ENSTTRP00000001510/1-552 MQLLPLALGV PQRGSPRHLP YCSSAPL--- ---------- ---------- bmy_21147T0/1-552 MRLLPLALGV PRRGSPRHLP YCSPAPL--- ---------- ---------- BACU008187/1-576 MRLLPLALGV PRRGSPRHLP YCSPAPLLLP LALGVPRRGS PRHLPYCSPA 51 100 ENSP00000258145/1-552 -LLLVLGGCL GVFGVAAGTR RPNVVLLLTD DQDEVLGGMT PLKKTKALIG ENSBTAP00000023218/1-560 LLLLLLGGCL GVSGAAKSSR RPNVVLLLAD DQDEVLGGMT PLKKTKALIG ENSTTRP00000001510/1-552 -LLLLLGGCL GVSGAAAGSR RPNVVLLLAD DQDEVLGGMT PLKKTKALIG bmy_21147T0/1-552 -LLLLLGGCL GVSAAAAGSR RPNVVLLLAD DQDEVLGGMT PLKKTKALIG BACU008187/1-576 PLLLLLGGCL GVSAAAAGSR RPNVVLLLAD DQDEVLGGMT PLKKTKALIG 101 150 ENSP00000258145/1-552 EMGMTFSSAY VPSALCCPSR ASILTGKYPH NHHVVNNTLE GNCSSKSWQK ENSBTAP00000023218/1-560 EMGMTFSSAY VPSALCCPSR ASILTGKYPH NHHVVNNTLE GNCSSKSWQK ENSTTRP00000001510/1-552 GMGMTFSSAY VPSALCCPSR ASILTGKYPH NHHVVNNTLE GNCSSKSWQK bmy_21147T0/1-552 EMGMTFSSAY VPSALCCPSR ASILTGKYPH NHHVVNNTLE GNCSSKSWQK BACU008187/1-576 EMGMTFSSAY VPSALCCPSR ASILTGKYPH NHHVVNNTLE GNCSSKSWQK 151 200 ENSP00000258145/1-552 IQEPNTFPAI LRSMCGYQTF FAGKYLNEYG APDAGGLEHV PLGWSYWYAL ENSBTAP00000023218/1-560 IQEPNTFPAI LRSMCGYQTF FAGKYLNEYG APDAGGLGHV PLGWSYWYAL ENSTTRP00000001510/1-552 IQEPDTFPAI LRSMCGYQTF FAGKYLNEYG APDAGGLAHV PLGWSYWYAL bmy_21147T0/1-552 IQEPDTFPAI LRSMCGYQTF FAGKYLNEYG APDAGGLAHV PLGWSYWYAL BACU008187/1-576 IQEPDTFPAI LRSMCGYQTF FAGKYLNEYG APDAGGLAHV PLGWSYWYAL 201 250 ENSP00000258145/1-552 EKNSKYYNYT LSINGKARKH GENYSVDYLT DVLANVSLDF LDYKSNFEPF ENSBTAP00000023218/1-560 EKNSKYYNYT LSINGKARKH GENYSVDYLT DVLANVSLDF LDYKSNSEPF ENSTTRP00000001510/1-552 EKNSKYYNYT LSINGKARKH GENYSVDYLT DVLANVSLDF LDYKSNSEPF bmy_21147T0/1-552 EKNSKYYNYT LSINGKARKH GENYSVDYLT DVLANVSLDF LDYKSNSEPF BACU008187/1-576 EKNSKYYNYT LSINGKARKH GENYSVDYLT DVLANVSLDF LDYKSNSEPF 251 300 ENSP00000258145/1-552 FMMIATPAPH SPWTAAPQYQ KAFQNVFAPR NKNFNIHGTN KHWLIRQAKT ENSBTAP00000023218/1-560 FMMISTPAPH SPWTAAPQYQ NAFQNVFAPR NKNFNIHGTN KHWLIRQAKT ENSTTRP00000001510/1-552 FMMISTPAPH SPWTAAPQYQ NTFQNVFAPR NKNFNIHGTN KHWLIRQAKT bmy_21147T0/1-552 FMMISTPAPH SPWTAAPQYQ NTFQNVFAPR NKNFNIHGTN KHWLIRQAKT BACU008187/1-576 FMMISTPAPH SPWTAAPQYQ NTFQNVFAPR NKNFNIHGTN KHWLIRQAKT 301 350 ENSP00000258145/1-552 PMTNSSIQFL DNAFRKRWQT LLSVDDLVEK LVKRLEFTGE LNNTYIFYTS ENSBTAP00000023218/1-560 PMTNSSIQFL DNAFRKRWQT LLSVDDLVEK LVKRLEFNGE LNNTYIFYTS ENSTTRP00000001510/1-552 PMTNSSIQFL DNAFRKRWQT LLSVDDLVEK LVKRLEFSRE LNDTYIFYTS bmy_21147T0/1-552 PMTNSSIQFL DNAFRKRWQT LLSVDDLVEK LVKRLEFSGE LNDTYIFYTS BACU008187/1-576 PMTNSSIQFL DNAFRKRWQT LLSVDDLVEK LVKRLEFSGE LNDTYIFYTS 351 400 ENSP00000258145/1-552 DNGYHTGQFS LPIDKRQLYE FDIKVPLLVR GPGIKPNQTS KMLVANIDLG ENSBTAP00000023218/1-560 DNGYHTGQFS LPIDKRQLYE FDIKVPLLVR GPGIKPNQTS KMLVANIDLG ENSTTRP00000001510/1-552 DNGYHTGQFS LPIDKRQLYE FDIKVPLLVR GPGIKPNQTS KLLVANIDLG bmy_21147T0/1-552 DNGYHTGQFS LPIDKRQLYE FDIKVPLLVR GPGIKPNQTS KMLVANIDLG BACU008187/1-576 DNGYHTGQFS LPIDKRQLYE FDIKVPLLVR GPGIKPNQTS KMLVANIDLG 401 450 ENSP00000258145/1-552 PTILDIAGYD LNKTQMDGMS LLPILRGASN LTWRSDVLVE YQGEGRNVTD ENSBTAP00000023218/1-560 PTILDIAGYS LNKTQMDGMS FLPILKGASN LTWRSDVLVE YQGEGRNVTD ENSTTRP00000001510/1-552 PTILDIAGYN LNKTQMDGMS FLPILKGASN LTWRSDVLVE YQGEGRNVTD bmy_21147T0/1-552 PTILDIAGYN LNKTQMDGMS FLPILKGASN LTWRSDVLVE YQGEGRNVTD BACU008187/1-576 PTILDIAGYN LNKTQMDGMS FLPILKGASN LTWRSDVLVE YQGEGRNVTD 451 500 ENSP00000258145/1-552 PTCPSLSPGV SQCFPDCVCE DAYNNTYACV RTMSALWNLQ YCEFDDQEVF ENSBTAP00000023218/1-560 PTCPSLSPGV SQCFPDCVCE DAYNNTYACV RTMSERWNLQ YCEFDDQEVF ENSTTRP00000001510/1-552 PTCPSLSPGV SQCFPDCVCE DAYNNTYACV RTMSEMWNLQ YCEFDDQEVF bmy_21147T0/1-552 PTCPSLSPGV SQCFPDCVCE DAYNNTYACV RTMSEMWNLQ YCEFDDQEVF BACU008187/1-576 PTCPSLSPGV SQCFPDCVCE DAYNNTYACV RTMSEMWNLQ YCEFDDQEVF 501 550 ENSP00000258145/1-552 VEVYNLTADP DQITNIAKTI DPELLGKMNY RLMMLQSCSG PTCRTPGVFD ENSBTAP00000023218/1-560 VEVYNLTADP HQLNNIAKSI DPELLGKMNY RLMMLQSCSG PTCRTPGVFD ENSTTRP00000001510/1-552 VEVYNLTADP HQINNIAKSI DPELLGKMNY RLMMLQSCSG PTCRTPGIFD bmy_21147T0/1-552 VEVYNLTADP HQINNIAKSI DPELLGKMNY RLMMLQSCSG PTCRTPGVFD BACU008187/1-576 VEVYNLTADP HQINNIAKSI DPELLGKMNY RLMMLQSCSG PTCRTPGVFD 551 600 ENSP00000258145/1-552 PGYRFDPRLM FSNRGSVRTR RFSKHLL ENSBTAP00000023218/1-560 PGYRFDPRLM FSNHGSVRTR RFSKHLL ENSTTRP00000001510/1-552 PGYRFDPRLM FNNHGSVRTR RFSKHL- bmy_21147T0/1-552 PGYRFDPRLM FNNHGSVRTR RFSKHL- BACU008187/1-576 PGYRFDPRLM FNNHGSVRTR RFSKHL-