KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:13 2014 Check: 00 .. Name: ENSP00000436455/1-420 Len: 665 Check: 181 Weight: 1.00 Name: ENSBTAP00000023221/1-415 Len: 665 Check: 4093 Weight: 1.00 Name: bmy_03605T0/1-312 Len: 665 Check: 29 Weight: 1.00 Name: BACU005624/1-579 Len: 665 Check: 7412 Weight: 1.00 Name: ENSTTRP00000014290/1-418 Len: 665 Check: 7974 Weight: 1.00 // 1 50 ENSP00000436455/1-420 ---------M RWRTILLQYC FLLITCLLTA LEAVPIDIDK TKVQNIHPVE ENSBTAP00000023221/1-415 ---------M KWRTILPQCC LLLVTCALPA LESVPIDIDK TKVKTTQPVD bmy_03605T0/1-312 MAARRRERAM KWRTVLLQYC FLLVTCILTA LEAVPIDIDK TKVENAQPVD BACU005624/1-579 ---------M KWRTILLQYC FLLVTCILTA LEAVPIDIDK TKVENAQPVD ENSTTRP00000014290/1-418 ---------M MWRTILLQYC FLLVTCILTA LEAVPIDIDK TKVENAQPVD 51 100 ENSP00000436455/1-420 SAKIEPPDTG LYYDEYLKQV IDVLETDKHF REKLQKADIE EIKSGRLSKE ENSBTAP00000023221/1-415 SAKIEPPDTG LYYDEYLKQV IDVLETDSHF REKLQKADIE EIKSGRLSKE bmy_03605T0/1-312 SAKIEPP--- ---------- ---------- ---------- ---SGRLSKE BACU005624/1-579 SAKIEPPDTG LYYDEYLKQV IDVLETDNHF REKLQKADIE EIK------- ENSTTRP00000014290/1-418 SAKIEPPDTG LYYDEYLKQV IDVLETDNHF REKLQKADIE EIKSGRLSKE 101 150 ENSP00000436455/1-420 LDLVSHHVRT KLDELKRQEV GRLRMLIKAK LDSLQDIGMD HQALLKQFDH ENSBTAP00000023221/1-415 LDLVSHHVRT KLDELKRQEV ARLRMLIKAK LDSFQDTGMD HHALLKQFDH bmy_03605T0/1-312 LDLVSHHVRT KLDELKRQEV ARLRMLIKAK LDSLQDTGMD HHALLKQFDH BACU005624/1-579 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014290/1-418 LDLVSHHVRT KLDELKRQEV ARLRMLIKAK LDSLQDTGID HHALLKQFDH 151 200 ENSP00000436455/1-420 LNHLNPDKFE STDLDMLIKA ATSDLEHYDK TRHEEFKKYE MMKEHERREY ENSBTAP00000023221/1-415 LNHLNPDKFE STDLDMLIKA ATSDLEHYDK ARHEEFKKYE MMKEHERREY bmy_03605T0/1-312 LNHLNPEKFE STDLDMLIKA ATSDLEHYDK ARHEEFKKYE MMKEHERREY BACU005624/1-579 ---------- ---------- ATSDLEHYDK ARHEEFKKYE MMKEHERREY ENSTTRP00000014290/1-418 LNHLNPEKFE STDLDMLIKA ATSDLEHYDK ARHEEFKKYE MMKEHERREY 201 250 ENSP00000436455/1-420 LKTLNEEKRK EEESKFEEMK KKHENHPKVN HPGSKDQLKE VWEETDGLDP ENSBTAP00000023221/1-415 LKTLSEEKRK EEESKFAEMK KKHENHPKVN HPGSKDQLKE VWEEADGLDP bmy_03605T0/1-312 LKTLNEEKRK EEESKFEEMK RKHENHPKVN HPGSKDQLKE VWEETDGLDP BACU005624/1-579 LKTLNEEKRK EEESKFEEMK RKHENHPKIN HPGSKDQLKE VWEEADGLDP ENSTTRP00000014290/1-418 LKTLNEEKRK EEESKFEEMK RKHESHPKVN HPGSKDQLKE VWEETDGLDP 251 300 ENSP00000436455/1-420 NDFDPKTFFK LHDVNSDGFL DEQELEALFT KELEKVYDPK NEEDDMVEME ENSBTAP00000023221/1-415 NDFDPKTFFK LHDVNSDGFL DEQELEALFT KELEKVYDPK NEEDDMVEME bmy_03605T0/1-312 NDFDPKTFFK LHDVNSDGFL DEQELEALFT KELEKVYDPK NEEDDMVEME BACU005624/1-579 NDFDPKTFFK LHDVNSDGFL DEQELEALFT KELEKVYDPK NEEDDMVEME ENSTTRP00000014290/1-418 NDFDPKTFFK LHDVNSDGFL DEQELEALFT KELEKVYDPK NEEDDMVEME 301 350 ENSP00000436455/1-420 EERLRMREHV MSEVDTNKDR LVTLEEFLKA TEKKEFLEPD SWETLDQQQF ENSBTAP00000023221/1-415 EERLRMREHV MNEVDTNKDR LVTLDEFLKA TEKKEFLEPD SWETLDHQQF bmy_03605T0/1-312 EERLRMREHV MNEVDTNKDR LVTLEEFLKA TEKKEFLEPD SWEVIEPT-- BACU005624/1-579 EERLRMREHV MNEVDTNKDR LVTLEEFLKA TEKKEFLEPD SWETLDQQQF ENSTTRP00000014290/1-418 EERLRMREHV MNEVDTNKDR LVTLEEFLKA TEKKEFLEPD SWETLDQQQF 351 400 ENSP00000436455/1-420 FTEEELKEYE NIIALQENEL KKKADELQKQ KEELQRQHDQ LEAQKLEYHQ ENSBTAP00000023221/1-415 FTEEELKEYE NLISVQESKL KKKADELQKQ KEDLQRQHDQ LEAQKLEYHQ bmy_03605T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU005624/1-579 FTEEELKEYE NIISIQETEL KKKADELQKQ KEELQRQHDQ LESQKLEYHQ ENSTTRP00000014290/1-418 FTEEELKEYE NLISIQETEL KKKADELQKQ KEELQRQHDQ LEAQKLEYHQ 401 450 ENSP00000436455/1-420 VIQQMEQKKL QQGIPPSGPA GELKFEPHI- ---------- ---------- ENSBTAP00000023221/1-415 VVQQMEQKKL QQ-ISPSAPG GESKI----- ---------- ---------- bmy_03605T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU005624/1-579 VLQQMEQKKL QQEISPSVPG GESKIQPRFL EVEMAGRTQM VFLNENATIF ENSTTRP00000014290/1-418 VLQQMEQKKL QQEISPSVPG GESKIQP--- ---------- ---------- 451 500 ENSP00000436455/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023221/1-415 ---------- ---------- ---------- ---------- ---------- bmy_03605T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU005624/1-579 CKIPGFPHLD INSMGITWFR KAQVSETEIK LFEFFGDHKV AFRPGANVSP ENSTTRP00000014290/1-418 ---------- ---------- ---------- ---------- ---------- 501 550 ENSP00000436455/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023221/1-415 ---------- ---------- ---------- ---------- ---------- bmy_03605T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU005624/1-579 WRLKRGDASL QLPGVQLWEA GEYRCELVVT PQKAQGRVWL EVVAHPVSSL ENSTTRP00000014290/1-418 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000436455/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023221/1-415 ---------- ---------- ---------- ---------- ---------- bmy_03605T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU005624/1-579 FLEQAMVKDN EDKHILCKSS GFYPEDISIT WKRWTQKEPQ FQEISEDIIT ENSTTRP00000014290/1-418 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000436455/1-420 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023221/1-415 ---------- ---------- ---------- ---------- ---------- bmy_03605T0/1-312 ---------- ---------- ---------- ---------- ---------- BACU005624/1-579 GPTIKNEDGT FNITSYLRLR PSLEDNVTIY QCVVWHVSSL MCQSFNFTPT ENSTTRP00000014290/1-418 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000436455/1-420 ---------- ----- ENSBTAP00000023221/1-415 ---------- ----- bmy_03605T0/1-312 ---------- ----- BACU005624/1-579 LIGKHPSRHF PNFSS ENSTTRP00000014290/1-418 ---------- -----