KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:13 2014 Check: 00 .. Name: ENSTTRP00000003776/1-342 Len: 400 Check: 728 Weight: 1.00 Name: BACU018830/1-325 Len: 400 Check: 6380 Weight: 1.00 Name: ENSP00000261438/1-345 Len: 400 Check: 3470 Weight: 1.00 Name: bmy_07387T0/1-400 Len: 400 Check: 5786 Weight: 1.00 Name: ENSBTAP00000023232/1-346 Len: 400 Check: 3628 Weight: 1.00 // 1 50 ENSTTRP00000003776/1-342 ---------- ---------- ----MLMFDP VPVKQEAMDP VSVSYPSNYX BACU018830/1-325 ---------- ---------- ---------- ---------- ---SYPSNYM ENSP00000261438/1-345 ---------- ---------- ----MLMFDP VPVKQEAMDP VSVSYPSNYM bmy_07387T0/1-400 MDSPSWDGLV EAKHQSTLES IIERMLMFDP VPVKQEAMDP VSVSYPSNYM ENSBTAP00000023232/1-346 ---------- ---------- ----MLMFDP VPVKQEAMDP VSVSYPSNYM 51 100 ENSTTRP00000003776/1-342 XXXXXXXXXX XXXXXXXXXX XQTPEGLSHG MQMEPVDLTV NKRSSPPSAG BACU018830/1-325 ESMKPNKYGV IYSAPLSDKF FQTPEGLSHG MQMEPVDLTV NKRSSPPSAG ENSP00000261438/1-345 ESMKPNKYGV IYSTPLPEKF FQTPEGLSHG IQMEPVDLTV NKRSSPPSAG bmy_07387T0/1-400 ESMKPNKYGV IYSTPLSDKF FQTPEGLSHG MQMEPVDLTV NKRSSPPSAG ENSBTAP00000023232/1-346 ESMKPNKYGV IYSTPLSDKF FQTPEGLSHG MQMEPVDLTV NKRSSPPSAG 101 150 ENSTTRP00000003776/1-342 N-PSSVKFPS LHRRASPGLS LPSSSPPGKK YSPPPPPGVQ PFSVPLSMPP BACU018830/1-325 NSPSSLKFQS LHRRASPGLS LPSSSPPGKK YSPPPPPGVQ PFXXXXXXXX ENSP00000261438/1-345 NSPSSLKFPS SHRRASPGLS MPSSSPPIKK YS-PPSPGVQ PFGVPLSMPP bmy_07387T0/1-400 NSPSSLKFQS LHRRASPGLS LPSSSPPGKK YSPPPPPGVQ PFSVPLSMPP ENSBTAP00000023232/1-346 NSPSSLKFQS SHRRASPGLS LPSSSPPGKK YSPPPPPGVQ PFSVPLSMPP 151 200 ENSTTRP00000003776/1-342 VMAAALSRHG IRSPGILPVI QPVVVQPVPF MYTSHLQQPL MVSLSDEMEN BACU018830/1-325 XXXP--PRHG IRSPGILPVI QPVVVQPVPF MYTSHLQQPL MVSLSDEMEN ENSP00000261438/1-345 VMAAALSRHG IRSPGILPVI QPVVVQPVPF MYTSHLQQPL MVSLSEEMEN bmy_07387T0/1-400 VMAAALSRHG IRSPGILPVI QPVVVQPVPF MYTSHLQQPL MVSLSDEMEN ENSBTAP00000023232/1-346 VMAAALSRHG IRSPGILPVI QPVVVQPVPF MYTSHLQQPL MVSLSEEMEN 201 250 ENSTTRP00000003776/1-342 SSSSMQVPVI ESYEKPLLQK KIKIEPGIEP QRTDYYPEEM SPPLMNSVSP BACU018830/1-325 SSSSMQVPVI ESYEKPLLQK KIKIEPGIEP QRTDYYPEEM SPPLMNSVSP ENSP00000261438/1-345 SSSSMQVPVI ESYEKPISQK KIKIEPGIEP QRTDYYPEEM SPPLMNSVSP bmy_07387T0/1-400 SSSSMQVPVI ESYEKPLLQK KIKIEPGIEP QRTDYYPEEM SPPLMNSVSP ENSBTAP00000023232/1-346 SSSSMQVPVI ESYEKPILQK KIKIEPGIEP QRTDYYPEEM SPPLMNSVSP 251 300 ENSTTRP00000003776/1-342 PQALLQE--- ---------- ---------- -------NHP SVIVQPGKRP BACU018830/1-325 PQALLQE--- ---------- ---------- -------NHP SVIVQPGKRP ENSP00000261438/1-345 PQALLQE--- ---------- ---------- -------NHP SVIVQPGKRP bmy_07387T0/1-400 PQALLQEMSD VFGEKIEPIS HNWDMYPSSS SLTDVIKNHP SVIVQPGKRP ENSBTAP00000023232/1-346 PQALLQE--- ---------- ---------- -------NHP SVIVQPGKRP 301 350 ENSTTRP00000003776/1-342 LPVDLPDTQR -RRIPRCDYD -CH-VYTKSS HLKAHRRTHT GEKPYKCTWE BACU018830/1-325 LPVESPDTQR KRRIHRCDYD GCNKVYTKSS HLKAHRRTHT GEKPYKCTWE ENSP00000261438/1-345 LPVESPDTQR KRRIHRCDYD GCNKVYTKSS HLKAHRRTHT GEKPYKCTWE bmy_07387T0/1-400 LPVESPDTQR KRRIHRCDYD GCNKVYTKSS HLKAHRRTHT GEKPYKCTWE ENSBTAP00000023232/1-346 LPVESPDTQR KRRIHRCDYD GCNKVYTKSS HLKAHRRTHT GEKPYKCTWE 351 400 ENSTTRP00000003776/1-342 GCTWKFARSD ELTRHFRKHT GIKPFQCPDC DRSFSRSDHL ALHRKRHMLV BACU018830/1-325 GCTWKFARSD ELTRHFRKHT GIKPFQCPDC DRSFSRSDHL ALHRKRHMLV ENSP00000261438/1-345 GCTWKFARSD ELTRHFRKHT GIKPFQCPDC DRSFSRSDHL ALHRKRHMLV bmy_07387T0/1-400 GCTWKFARSD ELTRHFRKHT GIKPFQCPDC DRSFSRSDHL ALHRKRHMLV ENSBTAP00000023232/1-346 GCTWKFARSD ELTRHFRKHT GIKPFQCPDC DRSFSRSDHL ALHRKRHMLV