KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:16 2014 Check: 00 .. Name: ENSTTRP00000004010/1-428 Len: 439 Check: 834 Weight: 1.00 Name: BACU013886/1-306 Len: 439 Check: 5862 Weight: 1.00 Name: ENSP00000327611/1-430 Len: 439 Check: 4537 Weight: 1.00 Name: bmy_17595T0/1-297 Len: 439 Check: 3013 Weight: 1.00 Name: ENSBTAP00000023260/1-430 Len: 439 Check: 3785 Weight: 1.00 // 1 50 ENSTTRP00000004010/1-428 MSSRSPRPPP RRCRRRLPRP SCCCCCCRRS HLNEDTGRFV LLAALIGLYL BACU013886/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000327611/1-430 MSSRSPRPPP RRSRRRLPRP SCCCCCCRRS HLNEDTGRFV LLAALIGLYL bmy_17595T0/1-297 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023260/1-430 MSSRSPRPPP RRCRRRLPRP SCCCCCCRRS HLNEDTGRFV LLAALIGLYL 51 100 ENSTTRP00000004010/1-428 VAGATVFSAL ESPGEAEARA RWGATLRNFS AAHGVAEPEL RAFLRHYEAA BACU013886/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000327611/1-430 VAGATVFSAL ESPGEAEARA RWGATLRNFS AAHGVAEPEL RAFLRHYEAA bmy_17595T0/1-297 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000023260/1-430 VAGATVFSAL ESPGEAEARA RWGATLRNFS AAHGVAEPEL RAFLRHYEAA 101 150 ENSTTRP00000004010/1-428 LAAGVRADAL RPRWDFPGAF YFVGTVVSTI GFGMTTPATV GGKAFLIAYG BACU013886/1-306 ---------- ---------- ---------- ---MTTPATV GGKAFLIAYG ENSP00000327611/1-430 LAAGVRADAL RPRWDFPGAF YFVGTVVSTI GFGMTTPATV GGKAFLIAYG bmy_17595T0/1-297 ---------- ---------- ---------- ---MTTPATV GGKAFLIAYG ENSBTAP00000023260/1-430 LAAGVRADAL RPRWDFPGAF YFVGTVVSTI GFGMTTPATV GGKAFLIAYG 151 200 ENSTTRP00000004010/1-428 LFGCAGTILF FNLFLERIIS LLAFIMRACR ERQLRRSGLL PATFRRGSAL BACU013886/1-306 LFGCAGTILF FNLFLERIIS LLAFIMRACR ERQLRRSGLL PATFRRGSAL ENSP00000327611/1-430 LFGCAGTILF FNLFLERIIS LLAFIMRACR ERQLRRSGLL PATFRRGSAL bmy_17595T0/1-297 LFGCAGTILF FNLFLERIIS LLAFIMRACR ERQLRRSGLL PATFRRGSAL ENSBTAP00000023260/1-430 LFGCAGTILF FNLFLERIIS LLAFIMRACR ERQLRRSGLL PATFRRGSAL 201 250 ENSTTRP00000004010/1-428 SEADCLAGWK PSVYHVLLIL GLFAVLLSCC ASAMYTSVEG WDYVDSLYFC BACU013886/1-306 SEADCLAGWK PSVYHVLLIL GLFAVLLSCC ASAMYTSVEG WDYVDSLYFC ENSP00000327611/1-430 SEADSLAGWK PSVYHVLLIL GLFAVLLSCC ASAMYTSVEG WDYVDSLYFC bmy_17595T0/1-297 SEADCLAGWK PSVYHVLLIL GLFAVLLSCC ASAMYTSVEG WDYVDSLYFC ENSBTAP00000023260/1-430 SEADCLAGWK PSVYHVLLIL GLFAVLLSCC ASAMYTSVEG WDYVDSLYFC 251 300 ENSTTRP00000004010/1-428 FVTFSTIGFG DLVSSQHAAY RNQGLYRLGN FLFILLGVCC IYSLF-VISI BACU013886/1-306 FVTFSTIGFG DLVSSQHAAY RNQGLYRLGN FLFILLGVCC IYSLFNVISI ENSP00000327611/1-430 FVTFSTIGFG DLVSSQHAAY RNQGLYRLGN FLFILLGVCC IYSLFNVISI bmy_17595T0/1-297 FVTFSTIGFG DLVSSQHAAY RNQGLYRLGN FLFILLGVCC IYSLFNVISI ENSBTAP00000023260/1-430 FVTFSTIGFG DLVSSQHAAY RNQGLYRLGN FLFILLGVCC IYSLFNVISI 301 350 ENSTTRP00000004010/1-428 LIKQVLNWML RXXXXXXXXX XXXXX----- ----XXXXXX XXXXXXXXXX BACU013886/1-306 LIKQVLNWML RKLSCRCCAR CCPAPXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000327611/1-430 LIKQVLNWML RKLSCRCCAR CCPAP----- ----GAPLAR RNAITPGSRL bmy_17595T0/1-297 LIKQVLNWML RKLSCRCCAR CCPAP----- ----GAPLAR RNAITPGSRL ENSBTAP00000023260/1-430 LIKQVLNWML RKLSCRCCAR CCPAP----- ----GAPLAR RNAITPGSRL 351 400 ENSTTRP00000004010/1-428 XXXXXXXXXX XXXXXXXXXX XXXSGELISM RRLKASQQVS LALLQKQLSK BACU013886/1-306 XXXXXXXXXD PAARDSDAEG RRLSGELISM RDLTASNKVS LALLQKQLSE ENSP00000327611/1-430 RRRLAALGAD PAARDSDAEG RRLSGELISM RDLTASNKVS LALLQKQLSE bmy_17595T0/1-297 RRRLAALGAD PAARDSDAEG RRLSGELISM RDLTASNKVS LALLQKQLSE ENSBTAP00000023260/1-430 RRRLAALGAD PAARDSDAEG RRLSGELISM RDLTASNKVS LALLQKQLSE 401 450 ENSTTRP00000004010/1-428 TANGYPRSVC VNTRQ-GFSG GVGALGIMNN SLAETSASR BACU013886/1-306 TANGYPRSVC VNTRQNGFSG GVGALGIMNN RLAETSASR ENSP00000327611/1-430 TANGYPRSVC VNTRQNGFSG GVGALGIMNN RLAETSASR bmy_17595T0/1-297 TANGYPRSVC VNTRQNGFSG GVGALGIMNN RLAETSASR ENSBTAP00000023260/1-430 TANGYPRSVC VNTRQNGFSG GVGALGIMNN RLAETSASR