KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:20:17 2014 Check: 00 .. Name: ENSP00000282018/1-346 Len: 369 Check: 1423 Weight: 1.00 Name: ENSBTAP00000023275/1-367 Len: 369 Check: 936 Weight: 1.00 Name: bmy_16078T0/1-339 Len: 369 Check: 5316 Weight: 1.00 Name: BACU012202/1-323 Len: 369 Check: 5623 Weight: 1.00 // 1 50 ENSP00000282018/1-346 MERKFMSLQP SISVSEMEPN GTFSNNNS-R NCTIENFKRE FFPIVYLIIF ENSBTAP00000023275/1-367 MERKLVSLSP SISASEMETN STFSDHHSNR NCTAEDFKRE FYPIVYLVIF bmy_16078T0/1-339 MERKPVSLPP SISISEMEPN DSFSNHNSSR NCTIETFKRE FYPIVYLVIF BACU012202/1-323 ---------- ------MESN GSFSNHNSSR NCTIETFKRE FYPIVYLVIF 51 100 ENSP00000282018/1-346 FWGVLGNGLS IYVFLQPYKK STSVNVFMLN LAISDLLFIS TLPFRADYYL ENSBTAP00000023275/1-367 IWGALGNGFS IYVFVQPYRK STSVNIFMLN LATSDLLFTA TLPFRVDYYL bmy_16078T0/1-339 IWGALGNGFS IYVFLQPYKK STSVNVFMLN LAISDLLFIT TLPFRVDYYL BACU012202/1-323 IWGALGNGFS IYVFLQPYKK STSVNVFMLN LAISDLLFIT TLPFRVDYYL 101 150 ENSP00000282018/1-346 RGSNWIFGDL ACRIMSYSLY VNMYSSIYFL TVLSVVRFLA MVHPFRLLHV ENSBTAP00000023275/1-367 RGSNWIFGDL SCRIMSYSMY VNMYSSIYFL TVLSVVRFLA TVHPFRLLHA bmy_16078T0/1-339 RGSNWIFGDL TCRIMSFSMY VNMYSSIYFL TVLSVVRFLA TVHPFRLLHA BACU012202/1-323 RGSNWIFGDL TCRIMSFSMY VNMYSSIYFL TVLSVVRFLA TVHPFRLLHA 151 200 ENSP00000282018/1-346 TSIRSAWILC GIIWILIMAS SIMLLDSGSE QNGSVTSCLE LNLYKIAKLQ ENSBTAP00000023275/1-367 TSVRNAWIVC GIIWIFIMAS STTLLNNGSE LKGNVTLCLE LNRNKAPKLK bmy_16078T0/1-339 TSVKNAWILC GVIWIFIMAS STVLLKNGSE LKGNVTLCLE LNPNKVIKLK BACU012202/1-323 TSVKNAWILC GVIWVFIMAS STVLLKNGSE LKGNVTLCLE LNPNKVMKLK 201 250 ENSP00000282018/1-346 TMNYIALVVG CLLPFFTLSI CYLLIIRVLL KVEVPESGLR VSHRKALTTI ENSBTAP00000023275/1-367 TMNYIALVVG FLLPFCTLSI CYMLIIRALL KAEVPELGLR LSHRKALTTI bmy_16078T0/1-339 TMNHVALVLG FLLPFCTLSM CYLLIIRALL KAEVPESGLR LSHRKALTTI BACU012202/1-323 TMNHIALVVG FLLPFCTLSI CYLLIIRALL KVEVPESGLR LSHRKALTTI 251 300 ENSP00000282018/1-346 IITLIIFFLC FLPYHTLRTV HLTTWKVGLC KDRLHKALVI TLALAAANAC ENSBTAP00000023275/1-367 IIALVIFLLC FLPYHILRTL HLLQWTADIC RDSLHKAVAI TLALAAANSC bmy_16078T0/1-339 IIALIIFLLC FLPYHILRTL HIVEWRVDKC KENLHKAVAI TLALAAANSC BACU012202/1-323 IIALIIFLLC FLPYHILRTL HVVEWRVDKC KENLHKAVAI TLALAAANSC 301 350 ENSP00000282018/1-346 FNPLLYYFAG ENFKDRLKSA LRKGHPQKAK TKCVFPVSVW LRKETRV--- ENSBTAP00000023275/1-367 FNPLLYYFAG ENFKDRLKSA LRKDHPQ--E PKCSFPFCVW LKNETRGTLQ bmy_16078T0/1-339 FNPLLYYFAG ENFKDRLKSA LRKCHSQ--Q TKCSFPVCV- -----CG--- BACU012202/1-323 FNPLLYYFAG ENFKDRLKSA LRKCHSQ--Q TKCSFPVSV- -----CG--- 351 400 ENSP00000282018/1-346 ---------- --------- ENSBTAP00000023275/1-367 ESLLLQNKRI NQDKGKHDI bmy_16078T0/1-339 ---------- --------- BACU012202/1-323 ---------- ---------