KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:18 2014 Check: 00 .. Name: bmy_03983T0/1-239 Len: 296 Check: 9515 Weight: 1.00 Name: ENSTTRP00000016405/1-295 Len: 296 Check: 7961 Weight: 1.00 Name: BACU003568/1-214 Len: 296 Check: 8786 Weight: 1.00 Name: ENSP00000227507/1-295 Len: 296 Check: 9379 Weight: 1.00 Name: ENSBTAP00000023277/1-295 Len: 296 Check: 5652 Weight: 1.00 // 1 50 bmy_03983T0/1-239 MAHQLLCCEM ETIRRAYPDA NLLNDRVLRA MLKAEETCAP SVSYFKCVQK ENSTTRP00000016405/1-295 MAHQLLCCEM ETIRRAYPDA NLLNDRVLRA MLKAEETCAP SVSYFKCVQK BACU003568/1-214 ---------- ---------- ---------- ---------- ---------- ENSP00000227507/1-295 MEHQLLCCEV ETIRRAYPDA NLLNDRVLRA MLKAEETCAP SVSYFKCVQK ENSBTAP00000023277/1-295 MAHQLLCCEM ETIRRAYPDA NLLNDRVLRA MLKAEETCAP SVSYFKCVQK 51 100 bmy_03983T0/1-239 EILPSMRKIV ATWMLEVCEE QKCEEEVFPL AMNYLDRFLS LEPVKKSRLQ ENSTTRP00000016405/1-295 EILPSMRKIV ATWMLEXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXLQ BACU003568/1-214 ---------- ---------- ---------- -MNYLDRFLS LEPVKKSRLQ ENSP00000227507/1-295 EVLPSMRKIV ATWMLEVCEE QKCEEEVFPL AMNYLDRFLS LEPVKKSRLQ ENSBTAP00000023277/1-295 EILPSMRKIV ATWMLEVCEE QKCEEEVFPL AMNYLDRFLS LEPVKKSRLQ 101 150 bmy_03983T0/1-239 LLGATCMFVA SKMKETIPLT AEKLCIYTDN SIRPDELLQM ELVLVNKLKW ENSTTRP00000016405/1-295 LLGATCMFVA SKMKETIPLT AEKLCIYTDN SIRPDELLQM ELVLVNKLKW BACU003568/1-214 LLGATCMFVA SKMKETIPLT AEKLCIYTDN SIRPEELLQM ELVLVNKLKW ENSP00000227507/1-295 LLGATCMFVA SKMKETIPLT AEKLCIYTDN SIRPEELLQM ELLLVNKLKW ENSBTAP00000023277/1-295 LLGATCMFVA SKMKETIPLT AEKLCIYTDN SIRPDELLHM ELVLVNKLKW 151 200 bmy_03983T0/1-239 NLAATTPHDF IEHFLSKMPV VEENKQIIRK HAQTFVALWS VE-------- ENSTTRP00000016405/1-295 NLAATTPHDF IEHFLSKMPV VEESKQVIRK HAQTFVALCA TDVKFISNPP BACU003568/1-214 NLAATTPHDF IEHFLSKMPV VEENKQIIRK HAQTFVALCA TDVKFISNPP ENSP00000227507/1-295 NLAAMTPHDF IEHFLSKMPE AEENKQIIRK HAQTFVALCA TDVKFISNPP ENSBTAP00000023277/1-295 NLAAMTPHDF IEHFLSKMPV AEENKQIIRK HAQTFVALCA TDVKFISNPP 201 250 bmy_03983T0/1-239 ---GSEEVRE EVCGGEVGGD HA-------- ---------- RDRLRL---- ENSTTRP00000016405/1-295 SMVAAGSVVA AVQGLHLGSA NSFLSYHRLT RFLSKVIRCD PDCLRACQEQ BACU003568/1-214 SMVAAGSVVA AVQGLHLGSA NSFLSYHRLT RFLSKVIRCD PDCLRACQEQ ENSP00000227507/1-295 SMVAAGSVVA AVQGLNLRSP NNFLSYYRLT RFLSRVIKCD PDCLRACQEQ ENSBTAP00000023277/1-295 SMVAAGSVAA AAQGLHLGSA NGFLSYHRLT RFLSKVIRCD PDCLRACQEQ 251 300 bmy_03983T0/1-239 --HFLYSLLP MTSQYSLETE ---------- ---------- --KINK ENSTTRP00000016405/1-295 IEALLESSLR QAQQQNLDPK AA-EEGEEED EADLACTPTD VRDVDI BACU003568/1-214 IEALLESSLR QAQQQNLDPK AA-EEEEEEE EVDLACTPTD VRDVDI ENSP00000227507/1-295 IEALLESSLR QAQQ-NMDPK AAEEEEEEEE EVDLACTPTD VRDVDI ENSBTAP00000023277/1-295 IEALLESSLR QAQQQNLDPK AA-EEEEEEE EVDLACTPTD VRDVNI