KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:20 2014 Check: 00 .. Name: ENSP00000327968/1-292 Len: 295 Check: 7320 Weight: 1.00 Name: ENSBTAP00000023305/1-291 Len: 295 Check: 1504 Weight: 1.00 Name: ENSTTRP00000005920/1-283 Len: 295 Check: 5785 Weight: 1.00 Name: bmy_20973T0/1-284 Len: 295 Check: 8844 Weight: 1.00 Name: BACU004288/1-275 Len: 295 Check: 3599 Weight: 1.00 // 1 50 ENSP00000327968/1-292 MPRSFLVKTH SSHRVPNYRR LETQREINGA CSACGGLVVP LLPRDKEAPS ENSBTAP00000023305/1-291 MPRSFLVKTH SSHRVPNYGQ LETQRDTSGA CAACGGLVVP FVLPDKAAPS ENSTTRP00000005920/1-283 MPRSFLVKTH SGHRVPNYGQ LERQRETNGA CSACGGLVVP LVLPDKAAPS bmy_20973T0/1-284 MPRSFLVKTH SSHRVPNYGQ LERQRETNGA CSACGGLVVP LVLPDKAAPS BACU004288/1-275 MPRSFLVKTH SSHRVPNYGQ LERQRETSGA CSACGGLVVP LVLPDKAAPS 51 100 ENSP00000327968/1-292 VPGDLPQPWD RSSAVACISL PLLPRI--EE ALGASGLDAL EVSEVDPRAS ENSBTAP00000023305/1-291 TSGDPPQPWD FTSVVAHVSL PLPTFLGNEE AGRALGPGPL EVSLEDPRAG ENSTTRP00000005920/1-283 TPGDPPRPWD FTSVVAHVSL PLPTFLCNEE ARGASGPDPL EVSLTDPRAG bmy_20973T0/1-284 TPGDPPRPWD FTSVVAHVSL PLPTFLCNEE ARGASGPDPL EVSLADPRAR BACU004288/1-275 TPGDPPRPWD FTSVVAHVSL PLPTFLCNEE ARGASGPDPL EVSLADPRAG 101 150 ENSP00000327968/1-292 RAAIVPLKDS LNHLNLPPLL VLPTRWSPTL GPDRHGAPE- KLLGAERMPR ENSBTAP00000023305/1-291 RAPSAPLRDS VNHLNLPPLL ALPTRWPSIL NADGAQAPGC CLPGAERAPC ENSTTRP00000005920/1-283 RALGAPLRDS LKHLGLPPLL ALPTRWPPVL GTDGAQAPG- HLPGAER-PC bmy_20973T0/1-284 RAPGAPLRDS LNHLNLPPLL ALPTRWPPIL GADGAQAPG- HLPGAERAPH BACU004288/1-275 RAPGAPLRDS LNHLNLPPLL ALPTRWPPIL GADGAQAPG- HLPGAERAPH 151 200 ENSP00000327968/1-292 APGGFECFHC HKPYHTLAGL ARHRQLHCHL QVGRVFTCKY CDKEYTSLGA ENSBTAP00000023305/1-291 SPGGFP---C HRPFHAPAAL AGHQQLHCHL QAQRCFTCKF CDKEYGSLGA ENSTTRP00000005920/1-283 TPVGFR---- -----TPAAL ARHQQLQCHL QAQRCFTCKF CDKEYGSLGA bmy_20973T0/1-284 TPGGFR---- -----TPAAL ARHQQLHCHL QAQRCFTCKF CDKEYGSLGA BACU004288/1-275 TPGGFR---- -----TPAAL ARHQQLHCHL QAQRCFTCKF CDKEYGSLGA 201 250 ENSP00000327968/1-292 LKMHIRTHTL PCTCKICGKA FSRPWLLQGH VRTHTGEKPY ACSHCSRAFA ENSBTAP00000023305/1-291 LKMHIRTHTL PCLCAICGKA FSRPWLLQGH LRTHTGEKPY TCPHCSRAFA ENSTTRP00000005920/1-283 LKMHIRTHTL PCLCTVCGKA FSRPWLLQGH IRTHTGEKPY TCPHCSRAFA bmy_20973T0/1-284 LKMHIRTHTL PCLCTVCGKA FSRPWLLQGH IRTHTGEKPY TCPHCSRAFA BACU004288/1-275 LKMHIRTHTL PCLCAMCGKA FSRPWLLQGH IRTHTG---- -----SRAFA 251 300 ENSP00000327968/1-292 DRSNLRAHLQ THSDAKKYRC RRCTKTFSRM SLLARHEESG CCPGP ENSBTAP00000023305/1-291 DRSNLRAHLQ THSDTKKYRC KRCAKTFSRM ALLARHEEAG CC-AP ENSTTRP00000005920/1-283 DRSNLRAHLQ THSDTKKYQC KRCAKTFSRV ALLARHEESG CC-AP bmy_20973T0/1-284 DRSNLRAHLQ THSDTKKYQC KRCAKTFSRV ALLARHEESG CC-AP BACU004288/1-275 DRSNLRAHLQ THSDTKKYQC KRCAKTFSRV ALLARHEESG CC-AP