KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:21 2014 Check: 00 .. Name: bmy_20222T0/1-499 Len: 597 Check: 5585 Weight: 1.00 Name: ENSP00000359925/1-524 Len: 597 Check: 9748 Weight: 1.00 Name: ENSBTAP00000023310/1-432 Len: 597 Check: 6120 Weight: 1.00 Name: BACU012243/1-443 Len: 597 Check: 4000 Weight: 1.00 Name: ENSTTRP00000000699/1-522 Len: 597 Check: 2410 Weight: 1.00 // 1 50 bmy_20222T0/1-499 ---------- ---------- ---------- ---------- ---------- ENSP00000359925/1-524 MFHCIPLWRC NRHVESIDKR HCSLVYVPEE IYRYARSLEE LLLDANQLRE ENSBTAP00000023310/1-432 ---------- ---------- ---------- ---------- ---------- BACU012243/1-443 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000699/1-522 MFHCIPLWRC NRHVETIDKX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 51 100 bmy_20222T0/1-499 ---------- ---------- ---------- ---------- MKPALSVPAI ENSP00000359925/1-524 LPEQFFQLVK LRKLGLSDNE IQRLPPEIAN FMQLVELDVS RNEIPEIPES ENSBTAP00000023310/1-432 ---------- ---------- ---------- ---------- --DIPEIPES BACU012243/1-443 ---------- ---------- ---------- -MQLVELDVS RNDIPEIPES ENSTTRP00000000699/1-522 XXXQFFQLVK LRKLGLSDNE IQRLPPEIAN FMQLVELDVS RNDIPEIPES 101 150 bmy_20222T0/1-499 LALM------ -LEGVQRIKA DERVGMMSDS PCSVRSHVNA LHIWSLLC-L ENSP00000359925/1-524 ISFCKALQVA DFSGNPLTRL PESFPELQNL TCLSVNDISL QSLPENIGNL ENSBTAP00000023310/1-432 ISFCKALQIA DFSGNPLTRL PESFPELQNL TCLSVNDISL QSLPENIGNL BACU012243/1-443 ISFCKALQIA DFSGNPLTRL PESFPELQNL TCLSVNDISL QSLPENIGNL ENSTTRP00000000699/1-522 ISFCKALQIA DFSGNPLTRL PESFPELQNL TCLSVNDISL QSLPENIGNL 151 200 bmy_20222T0/1-499 YNLASLELRE NLLTYLPDSL TQLRRLEELD LGNNEIYNLP ESIGALLHLK ENSP00000359925/1-524 YNLASLELRE NLLTYLPDSL TQLRRLEELD LGNNEIYNLP ESIGALLHLK ENSBTAP00000023310/1-432 YNLASLELRE NLLTYLPDSL TQLRRLEELD LGNNEIYNLP ESIGALLHLK BACU012243/1-443 YNLASLELRE NLLTYLPDSL TQLRRLEELD LGNNEIYNLP ESIGALLHLK ENSTTRP00000000699/1-522 YNLASLELRE NLLTYLPDSL TQLRRLEELD LGNNEIYNLP ESIGALLHLK 201 250 bmy_20222T0/1-499 DLWLDGNQLS ELPQEIGNLK NLLCLDVSEN RLERLPEEIS GLTSLTDLVI ENSP00000359925/1-524 DLWLDGNQLS ELPQEIGNLK NLLCLDVSEN RLERLPEEIS GLTSLTDLVI ENSBTAP00000023310/1-432 DLWLDGNQLS ELPQEIGNLK NLLCLDVSEN RLERLPEEIS GLTSLTDLVI BACU012243/1-443 DLWLDGNQLS ELPQEIGNLK NLLCLDVSEN RLERLPEEIS GLTSLTDLVI ENSTTRP00000000699/1-522 DLWLDGNQLS ELPQEIGNLK NLLCLDVSEN RLERLPEEIS GLTSLTDLVI 251 300 bmy_20222T0/1-499 SQNLLETLPD GIGKLKKLSI LKVDQNRLTQ LPEAVGDCES LTELVLTENR ENSP00000359925/1-524 SQNLLETIPD GIGKLKKLSI LKVDQNRLTQ LPEAVGECES LTELVLTENQ ENSBTAP00000023310/1-432 SQNLLEMLPD GIGKLKKLSI LKVDQNRLTQ LPEAVGDCES LTELVLTENR BACU012243/1-443 SQNLLETLPD GIGKLKKLSI LKVDQNRLTQ LPEAVGDCEG LTELVLTENR ENSTTRP00000000699/1-522 SQNLLETLPD GIGKLKKLSI -KVDQNRLTQ LPEAVGDCES LTELVLTENR 301 350 bmy_20222T0/1-499 LLTLPKSIGK LKKLSNLNAD RNKLVSLPKE IGGCSSLTVF CVRDNRLTRI ENSP00000359925/1-524 LLTLPKSIGK LKKLSNLNAD RNKLVSLPKE IGGCCSLTVF CVRDNRLTRI ENSBTAP00000023310/1-432 LLTLPKSIGK LKKLSNLNAD RNKLVSLPKE IGGCCSLTVF CVRDNRLTRI BACU012243/1-443 LLTLPKSIGK LKKLSNLNAD RNKLVSLPKE IGGCSSLTVF CVRDNRLTRI ENSTTRP00000000699/1-522 LLTLPKSIGK LKKLSNLNAD RNKLVSLPKE IGGCSSLTVF CVRDNRLTRI 351 400 bmy_20222T0/1-499 PAEVSRAAEL HVLDVAGNRK RFLFFFPLSF WTRLDLITDC KLPMSPFVFI ENSP00000359925/1-524 PAEVSQATEL HVLDVAGNR- --LLHLPLSL -TALK----- ---------- ENSBTAP00000023310/1-432 PAEVSRAAEL HVLDVAGNR- --LSHLPLSL -TALN----- ---------- BACU012243/1-443 PAEVSRAAEL HVLDVAGNR- --LSHLPLSL -TALK----- ---------- ENSTTRP00000000699/1-522 PAEVSRAAEL HVLDVAGNR- --LSHLPLSL -TALK----- ---------- 401 450 bmy_20222T0/1-499 EALKALWLSD NQSQPLLTFQ TDTDHTTGEK VLTCVLLPQL PSEPACQENL ENSP00000359925/1-524 --LKALWLSD NQSQPLLTFQ TDTDYTTGEK ILTCVLLPQL PSEPTCQENL ENSBTAP00000023310/1-432 --LKALWLSD NQAQPLLTFQ TDTDHTTGEK ILTCVLLPQL PSEPACQENL BACU012243/1-443 --LKALWLSD NQSQPLLTFQ TDTDHTTGEK VLTCVLLPQL PSEPACQENL ENSTTRP00000000699/1-522 --LKALW-SD NQSQPVLTFQ TDTDHTTGEK ILTCVLLPQL PSEPACQENL 451 500 bmy_20222T0/1-499 PRCGALESLV NDVSDEAWNE RAVNRVSAIR FLEDEKDEDD NETRTLLRRA ENSP00000359925/1-524 PRCGALENLV NDVSDEAWNE RAVNRVSAIR FVEDEKDEED NETRTLLRRA ENSBTAP00000023310/1-432 PRCGALESLV HDVSEEAWNE RAVNRVSAIR FLDDEKDDDD NETRTLLRRA BACU012243/1-443 PRCGALESLV NDVSDEAWNE RAVNRVSAIR FLEDEKDEDD NETRTLLRRA ENSTTRP00000000699/1-522 PRCGALESLV NDVSDEAWNE RAVNRVSAIR FLEDEKDEDD NETRTLLRRA 501 550 bmy_20222T0/1-499 TPHPGELKNM KKTVENLRND RNAAKGLDSN KNEVNHTIDR VTTSLFNTLL ENSP00000359925/1-524 TPHPGELKHM KKTVENLRND MNAAKGLDSN KNEVNHAIDR VTTSV----- ENSBTAP00000023310/1-432 TPHPGELKSM KKTVENLRND RNAAKGLDSN KNEVNHAVDR VTTSV----- BACU012243/1-443 TPHPGELKNM KKTVENLRND RNAAKGLDSN KNEVNHTIDR VTTSV----- ENSTTRP00000000699/1-522 TPHPGELKNM KKTVENLRND RNAAKGLDSN KNEVNHTIDR VTTSV----- 551 600 bmy_20222T0/1-499 TTSDLCFCLV LGSGRAGRGI LILFPPMKCW DIVNPSSLGP TDEREFY ENSP00000359925/1-524 ---------- ---------- ---------- ---------- ------- ENSBTAP00000023310/1-432 ---------- ---------- ---------- ---------- ------- BACU012243/1-443 ---------- ---------- ---------- ---------- ------- ENSTTRP00000000699/1-522 ---------- ---------- ---------- ---------- -------