KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:21 2014 Check: 00 .. Name: bmy_07430T0/1-288 Len: 449 Check: 4607 Weight: 1.00 Name: ENSP00000386170/1-447 Len: 449 Check: 9512 Weight: 1.00 Name: ENSBTAP00000023312/1-449 Len: 449 Check: 7648 Weight: 1.00 Name: BACU009539/1-449 Len: 449 Check: 6893 Weight: 1.00 Name: ENSTTRP00000016598/1-449 Len: 449 Check: 7247 Weight: 1.00 // 1 50 bmy_07430T0/1-288 MEFTASPKPQ LSSRANAFSI AALMSSGGSK EKESTENTIK PLEQFVEKSS ENSP00000386170/1-447 MEFTASPKPQ LSSRANAFSI AALMSSGGSK EKEATENTIK PLEQFVEKSS ENSBTAP00000023312/1-449 MEFTASPKPQ LSSRANAFSI AALMSSGGSK EKEATENTIK PLEQFVEKSS BACU009539/1-449 MEFTASPKPQ LSSRANAFSI AALMSSGGSK EKEATENTIK PLEQFVEKSS ENSTTRP00000016598/1-449 MEFTASPKPQ LSSRANAFSI VALMSSGGPK EKEATENTIK PLEQFVEKSS 51 100 bmy_07430T0/1-288 CAQPLGELTS LDAHGEFGGS VAGNSSPSSS SLCTEPLIPT TPIIPSEEMA ENSP00000386170/1-447 CAQPLGELTS LDAHGEFGG- -GSGSSPSSS SLCTEPLIPT TPIIPSEEMA ENSBTAP00000023312/1-449 CTQPLGELTS LDAHGEFGGS GAGSSSPSSS SLCTEPLIPT TPIIPSEEMA BACU009539/1-449 CAQPLGELTS LDAHGEFGGS VAGNSSPSSS SLCTEPLIPT TPIIPSEEMA ENSTTRP00000016598/1-449 CAQPLGELTS LDAHGEFGGS VAGNSSPSSS SLCTEPLIPT TPIIPSEEMA 101 150 bmy_07430T0/1-288 KIACSLETKE LWDKFHELGT EMIITKSGRR MFPTIRVSFS GVDSEAKYIV ENSP00000386170/1-447 KIACSLETKE LWDKFHELGT EMIITKSGRR MFPTIRVSFS GVDPEAKYIV ENSBTAP00000023312/1-449 KIACSLETKE LWDKFHELGT EMIITKSGRR MFPTIRVSFS GVDSEAKYIV BACU009539/1-449 KIACSLETKE LWDKFHELGT EMIITKSGRR MFPTIRVSFS GVDSEAKYIV ENSTTRP00000016598/1-449 KIACSLETKE LWDKFHELGT EMIITKSGRR MFPTIRVSFS GVDSEAKYIV 151 200 bmy_07430T0/1-288 LMDIVPVDNK RYRYAYHRSS WLVAGKADPP LPARLYVHPD SPFTGEQLLK ENSP00000386170/1-447 LMDIVPVDNK RYRYAYHRSS WLVAGKADPP LPARLYVHPD SPFTGEQLLK ENSBTAP00000023312/1-449 LMDIVPVDNK RYRYAYHRSS WLVAGKADPP LPARLYVHPD SPFTGEQLLK BACU009539/1-449 LMDIVPVDNK RYRYAYHRSS WLVAGKADPP LPARLYVHPD SPFTGEQLLK ENSTTRP00000016598/1-449 LMDIVPVDNK RYRYAYHRSS WLVAGKADPP LPARLYVHPD SPFTGEQLLK 201 250 bmy_07430T0/1-288 QMVSFEKVKL TNNELDQHGH IILNSMHKYQ PRVHIIKKKD HTASLLNLKS ENSP00000386170/1-447 QMVSFEKVKL TNNELDQHGH IILNSMHKYQ PRVHIIKKKD HTASLLNLKS ENSBTAP00000023312/1-449 QMVSFEKVKL TNNELDQHGH IILNSMHKYQ PRVHIIKKKD HTASLLNLKS BACU009539/1-449 QMVSFEKVKL TNNELDQHGH IILNSMHKYQ PRVHIIKKKD HTASLLNLKS ENSTTRP00000016598/1-449 QMVSFEKVKL TNNELDQHGH IILNSMHKYQ PRVHIIKKKD HTASLLNLKS 251 300 bmy_07430T0/1-288 EEFRTFIFPE TVFTAVTAYQ NQLV------ SIPFTIYFPN KIRL------ ENSP00000386170/1-447 EEFRTFIFPE TVFTAVTAYQ NQLITKLKID SNPFAKGFRD SSRLTDIERE ENSBTAP00000023312/1-449 EEFRTFIFPE TVFTAVTAYQ NQLITKLKID SNPFAKGFRD SSRLTDIERE BACU009539/1-449 EEFRTFIFPE TVFTAVTAYQ NQLITKLKID SNPFAKGFRD SSRLTDIERE ENSTTRP00000016598/1-449 EEFRTFIFPE TVFTAVTAYQ NQLITKLKID SNPFAKGFRD SSRLTDIERE 301 350 bmy_07430T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSP00000386170/1-447 SVESLIQKHS YARSPIRTYG GEEDVLGDES QTTPNRGSAF TTSDNLSLSS ENSBTAP00000023312/1-449 SVESLIQKHS YARSPIRTYG GEEDVLGDEV QTTQNRGSAF TTSDNLSLSS BACU009539/1-449 SVESLIQKHS YARSPIRTYG GEEDVLGDEV QTTQNRGSAF TTSDNLSLSS ENSTTRP00000016598/1-449 SVESLIQKHS YARSPIRTYG GEEDVLGDEV QTTQNRGSAF TTSDNLSLSS 351 400 bmy_07430T0/1-288 ---------- ---------- ---------- ---------- ---------- ENSP00000386170/1-447 WVSSSSSFPG FQHPQSLTAL GTSTASIATP IPHPIQGSLP PYSRLGMPLT ENSBTAP00000023312/1-449 WVSSSSSFPA FQHPQSLTAL GTSTASIATP IPHPIQGSLP PYSRLGMPLT BACU009539/1-449 WVSSSSSFPG FQHPQSLTAL GTSTASIATP IPHPIQGSLP PYSRLGMPLT ENSTTRP00000016598/1-449 WVSSSSSFPG FQHPQSLTAL GTSTASIATP IPHPIQGSLP PYSRLGMPLT 401 450 bmy_07430T0/1-288 ---------- ---------- ---------- ---------- --------- ENSP00000386170/1-447 PSAIASSMQG SGPTFPSFHM PRYHHYFQQG PYAAIQGLRH SSAVMTPFV ENSBTAP00000023312/1-449 PSAIASSMQG SGPTFPSFHM PRYHHYFQQG PYAAIQGLRH SSAVMTPFV BACU009539/1-449 PSAIASSMQG SGPTFPSFHM PRYHHYFQQG PYAAIQGLRH SSAVMTPFV ENSTTRP00000016598/1-449 PSAIASSMQG SGPTFPSFHM PRYHHYFQQG PYAAIQGLRH SSAVMTPFV