KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:23 2014 Check: 00 .. Name: ENSBTAP00000023329/1-422 Len: 495 Check: 7087 Weight: 1.00 Name: ENSP00000378807/1-455 Len: 495 Check: 313 Weight: 1.00 Name: ENSTTRP00000011504/1-455 Len: 495 Check: 250 Weight: 1.00 Name: bmy_09009T0/1-376 Len: 495 Check: 2046 Weight: 1.00 Name: BACU013031/1-270 Len: 495 Check: 9309 Weight: 1.00 // 1 50 ENSBTAP00000023329/1-422 ---------- ---------- ---------- ---------M ENKKKDKDKS ENSP00000378807/1-455 ---------- ---------- ---------- ---------M ENKKKDKDKS ENSTTRP00000011504/1-455 ---------- ---------- ---------- ---------M DNKKKDKDKS bmy_09009T0/1-376 MTVVLSLLIG GGCGEGLSEL FNGVLVLIKE FKVEYRKLDM DNKKKDKDKS BACU013031/1-270 ---------- ---------- ---------- -------LDM DNKKKDKDKS 51 100 ENSBTAP00000023329/1-422 DDRMARPSGR LGHNTRGTGS SSSGVLMVGP NFRVGKKIGC GNFGELRLGK ENSP00000378807/1-455 DDRMARPSGR SGHNTRGTGS SSSGVLMVGP NFRVGKKIGC GNFGELRLGK ENSTTRP00000011504/1-455 DDRMARPSGR SGHNTRGTGS SSSGVLMVGP NFRVGKKIGC GNFGELRLGK bmy_09009T0/1-376 DDRMARPSGR SGHNTRGTGS SSSGVLMVGP NFRVGKKIGC GNFGELRL-- BACU013031/1-270 DDRMARPSGR SGHNTRGTGS SSSGVLMVGP NFRVGKKIGC GNFGELRLGK 101 150 ENSBTAP00000023329/1-422 NLYTNEYVAI KLEPMKSRAP QLHLEYRFYK QLGSGDGIPQ VYYFGPCGKY ENSP00000378807/1-455 NLYTNEYVAI KLEPMKSRAP QLHLEYRFYK QLGSGDGIPQ VYYFGPCGKY ENSTTRP00000011504/1-455 NLYTNEYVAI KLEPMKSRAP QLHLEYRFYK QLGSGDGIPQ VYYFGPCGKY bmy_09009T0/1-376 ---------- ---------- ---------- -----DGIPQ VYYFGPCGKY BACU013031/1-270 NLYTNEYVAI KLEPMKSRAP QLHLEYRFYK QLGSGDGIPQ VYYFGPCGKY 151 200 ENSBTAP00000023329/1-422 NAMVLELLGP SLEDLFDLCD RTFSLKTVLM IAIQLISRME YVHSKNLIYR ENSP00000378807/1-455 NAMVLELLGP SLEDLFDLCD RTFSLKTVLM IAIQLISRME YVHSKNLIYR ENSTTRP00000011504/1-455 NAMVLELLGP SLEDLFDLCD RTFSLKTVLM IAIQLISRME YVHSKNLIYR bmy_09009T0/1-376 NAMVLELLGP SLEDLFDLCD RTFSLKTVLM IAIQLISRME YVHSKNLIYR BACU013031/1-270 NAMVLELLGP SLEDLFDLCD RTFSLKTVLM IAIQL----- ---------- 201 250 ENSBTAP00000023329/1-422 DVKPENFLIG RPGNKTQQVI HIIDFGLAKE YIDPETKKHI PYREHKSLTG ENSP00000378807/1-455 DVKPENFLIG RPGNKTQQVI HIIDFGLAKE YIDPETKKHI PYREHKSLTG ENSTTRP00000011504/1-455 DVKPENFLIG RPGNKTQQVI HIIDFGLAKE YIDPETKKHI PYREHKSLTG bmy_09009T0/1-376 DVKPENFLIG RPGNKTQQVI HIIDFGLAKE YIDPETKKHI PYREHKSLTG BACU013031/1-270 ---------- ---------- ---------- ---------- ---------- 251 300 ENSBTAP00000023329/1-422 TARYMSINTH LGKEQSRRDD LEALGHMFMY FLRGSLPWQG LKADTLKERY ENSP00000378807/1-455 TARYMSINTH LGKEQSRRDD LEALGHMFMY FLRGSLPWQG LKADTLKERY ENSTTRP00000011504/1-455 TARYMSINTH LGKEQSRRDD LEALGHMFMY FLRGSLPWQG LKADTLKERY bmy_09009T0/1-376 TARYMSINTH LGKEQSRRDD LEALGHMFMY FLRGSLPWQG LKADTLKERY BACU013031/1-270 ---------- ---------- ---------- ---------- --ADTLKERY 301 350 ENSBTAP00000023329/1-422 QKIGDTKRAT PIEVLCENFP -EMATYLRYV RRLDFFEKPD YDYLRKLFTD ENSP00000378807/1-455 QKIGDTKRAT PIEVLCENFP -EMATYLRYV RRLDFFEKPD YDYLRKLFTD ENSTTRP00000011504/1-455 QKIGDTKRAT PIEVLCENFP -EMATYLRYV RRLDFFEKPD YDYLRKLFTD bmy_09009T0/1-376 QKIGDTKRAT PIEVLCENFP EEMATYLRYV RRLDFFEKPD YDYLRKLFTD BACU013031/1-270 QKIGDTKRAT PIEVLCENFP EEMATYLRYV RRLDFFEKPD YDYLRKLFTD 351 400 ENSBTAP00000023329/1-422 LFDRKGYMFD YEYDWIGKQL PTPVGAVQQD PALSSNREAH PHRDKIQSKN ENSP00000378807/1-455 LFDRKGYMFD YEYDWIGKQL PTPVGAVQQD PALSSNREAH QHRDKMQQSK ENSTTRP00000011504/1-455 LFDRKGYMFD YEYDWIGKQL PTPVGAVQQD PALSSNREAH QHRDKIQQSK bmy_09009T0/1-376 LFDRKGYMFD YEYDWIGKQL ---------- ---------- ---------- BACU013031/1-270 LFDRKGYMFD YEYDWIGKQL ---------- ---------- ---------- 401 450 ENSBTAP00000023329/1-422 Q--------- ---------- ---------- ----VVSSTN GELNTDDPTA ENSP00000378807/1-455 NQSADHRAAW DSQQANPHHL RAHLAADRHG GSVQVVSSTN GELNTDDPTA ENSTTRP00000011504/1-455 NQSADHRAAW DSQQANPHHL RAHLAADRHG GSVQVVSSTN GELNTDDPTA bmy_09009T0/1-376 ---------- ---------- ---------- ----VVSSTN GELNTDDPTA BACU013031/1-270 ---------- ---------- ---------- ----VVSSTN GELNTDDPTA 451 500 ENSBTAP00000023329/1-422 GRSNAPITAP TEVEVMDETN CQKVLNMWCC CFFKRRKRKT IQRHK ENSP00000378807/1-455 GRSNAPITAP TEVEVMDETN CQKVLNMWCC CFFKRRKRKT IQRHK ENSTTRP00000011504/1-455 GRSNAPITAP TEVEVMDETN CQKVLNMWCC CFFKRRKRKT IQRHK bmy_09009T0/1-376 GRSNAPITAP TEVEVMDETN CQKVLNM--- ---------- ----- BACU013031/1-270 GRSNAPITAP TEVEVMDETN CQKVLNMW-- ---------- -----