KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:24 2014 Check: 00 .. Name: ENSP00000358042/1-528 Len: 571 Check: 4810 Weight: 1.00 Name: ENSBTAP00000023342/1-526 Len: 571 Check: 7302 Weight: 1.00 Name: ENSTTRP00000008352/1-526 Len: 571 Check: 5811 Weight: 1.00 Name: bmy_04950T0/1-465 Len: 571 Check: 2557 Weight: 1.00 Name: BACU014182/1-518 Len: 571 Check: 8989 Weight: 1.00 // 1 50 ENSP00000358042/1-528 ---------- ---------- ---------- --------ML GRSLRE---- ENSBTAP00000023342/1-526 ---------- ---------- ---------- --------ML GRTLRE---- ENSTTRP00000008352/1-526 ---------- ---------- ---------- --------ML GRTLRE---- bmy_04950T0/1-465 LLWWRVGHQD HVGPDPPRSE WNSLLRAQGG REDSRSPCSR GRGVPRPARI BACU014182/1-518 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000358042/1-528 -VSAALKQGQ ITPTELCQKC LSLIKKTKFL NAYITVSEEV ALKQAEESEK ENSBTAP00000023342/1-526 -VSVALKQGQ ITPTELCQRC LSLIKKTKFL NAYITVSEEV ALKQAEESEK ENSTTRP00000008352/1-526 -VSAALKQGQ VTPTELCQRC LSLIKKTKFL NAYITVSEEV ALKQAEESEK bmy_04950T0/1-465 LVSAALKQGQ VTPTELCQRC LSLIKKTKFL NAYITVSEEV ALKQAEESEK BACU014182/1-518 -VSAALKQGQ VTPTELCQRC LSLIKKTKFL NAYITVSEEV ALKQAEESEK 101 150 ENSP00000358042/1-528 RYKNGQSLGD LDGIPIAVKD NFSTSGIETT CASNMLKGYI PPYNATVVQK ENSBTAP00000023342/1-526 RYKKGHSLGD LDGIPIAVKD NFSTSGIETT CASNMLKGYV PPYNATVVQK ENSTTRP00000008352/1-526 RYKKGHSLGD LDGIPVAVKD NFSTAGIETT CASNMLKGYV PPYNATVVQK bmy_04950T0/1-465 RYKKGLSLGD LDGIPVAVKD NFSTAGIETT CASNMLK--- ---------- BACU014182/1-518 RYKKGLSLGD LDGIPVAVKD NFSTAGIETT CASNMLKGYV PPYNATVVQK 151 200 ENSP00000358042/1-528 LLDQGALLMG KTNLDEFAMG SGSTDGVFGP VKNPWSYSKQ YREKRKQNPH ENSBTAP00000023342/1-526 LLDQGALLMG KTNLDEFAMG SGSTDGIFGP VKNPWSYSKQ YREKRKQNSH ENSTTRP00000008352/1-526 LLDQGALLMG KTNLDEFAMG SGSTDGIFGP VKNPWSYSKQ YREKRKQKSH bmy_04950T0/1-465 ---------- ---------- ---------- ---------- ---------- BACU014182/1-518 LLDQGALLMG KTNLDEFAMG SGSTDGIFGP VKNPWSYSKQ YREKRKQKSH 201 250 ENSP00000358042/1-528 SENEDSDWLI TGGSSGGSAA AVSAFTCYAA LGSDTGGSTR NPAAHCGLVG ENSBTAP00000023342/1-526 SENEDSNWLI TGGSSGGSAA AVSAFTCFAA LGSDTGGSTR NPAAHCGVVG ENSTTRP00000008352/1-526 GKNEDSHWLI TGGSSGGSAA AVSAFTCFAA LGSDTGGSTR NPAAHCGVVG bmy_04950T0/1-465 ---------- ---------- ---------- -GSDTGGSTR NPAAHCGVVG BACU014182/1-518 GENEDSDWLI TGGSSGGSAA AVSAFTCFAA LGSDTGGSTR NPAAHCGVVG 251 300 ENSP00000358042/1-528 FKPSYGLVSR HGLIPLVNSM DVPGILTRCV DDAAIVLGAL AGPDPRDSTT ENSBTAP00000023342/1-526 LKPSYGLVSR HGLIPLVNSM DVPGILTRCV DDAATVLGVL AGHDPKDSTT ENSTTRP00000008352/1-526 LKPSYGLVSR HGLIPLVNSM DVPGILTRCV DDAAIVLGIL AGHDPKDSTT bmy_04950T0/1-465 LKPSYGLVSR HGLIPLVNSM DVPGILTRCV DDAAIVLGIL AGHDPKDSTT BACU014182/1-518 LKPSYGLVSR HGLIPLVNSM DVPGTLTRCV DDAATVLGIL AGHDPKDSTT 301 350 ENSP00000358042/1-528 VHEPINKPFM LPSLADVSKL CIGIPKEYLV PELSSEVQSL WSKAADLFES ENSBTAP00000023342/1-526 IQDPV-KPFT LPSLTDVSKL CIGIPKEYLT PELSSEVQSL WSKAANLFES ENSTTRP00000008352/1-526 IQDPV-KPFT LPSLTDMSKL CIGIPKEYLT PELSSEVQSL WSKAANLFES bmy_04950T0/1-465 IQDPV-KPFT LPSLTD---- ------EYLT PELSSEVQSL WSKAAHLFES BACU014182/1-518 IQDPV-KPFT LPSLTDVSKL CIGIPKEYLT PELSSEVRSL WSKAANLFES 351 400 ENSP00000358042/1-528 EGAKVIEVSL PHTSYSIVCY HVLCTSEVAS NMARFDGLQY GHRCDIDVST ENSBTAP00000023342/1-526 EGAKVTEVSL PHTSYSIVCY HVLCTSEVAS NMARFDGLEY GHRCDSDVST ENSTTRP00000008352/1-526 EGAKVIEVSL PHTSYSIVCY HVLCTSEVAS NMARFDGLEY GHRCDIDVST bmy_04950T0/1-465 XGAKVIEVSL PHTSYSIVCY HVLCTSEVAS NMARFDGLEY GHRCDTDVST BACU014182/1-518 EGAKVIEVSL PHTSYSIVCY HVLCTSEVAS NMARFDGLEY GHRCDTDVST 401 450 ENSP00000358042/1-528 EAMYAATRRE GFNDVVRGRI LSGNFFLLKE NYENYFVKAQ KVRRLIANDF ENSBTAP00000023342/1-526 EAMYAATRRE GFNDVVRGRI LSGNFFLLKE NYENYFVKAQ KVRRLIANDF ENSTTRP00000008352/1-526 EAMYAATRRE GFNDVVRGRI LSGNFFLLKE NYENYFVKAQ KVRRLIARDF bmy_04950T0/1-465 EAMYAATRRE GFNDVVRERI LSGNFFLLKE NYENYFVKAQ KVRRLIARDF BACU014182/1-518 EAMYAATRRE GFNDVVRERI LSGNFFLLKE NYENYFLKAQ KVRRLIARDF 451 500 ENSP00000358042/1-528 VNAFNSGVDV LLTPTTLSEA VPYLEFIKED NRTRSAQDDI FTQAVNMAGL ENSBTAP00000023342/1-526 VNVFNSGVDV LLTPTTLSEA VPYTEFIKED NRTRSAQDDI FTQAVNMAGL ENSTTRP00000008352/1-526 VNVFNSGVDV LLTPTTLSEA VPHTEFIRED NRTRSAQDDL FTQAVNMAGL bmy_04950T0/1-465 VNVFNSGVDV LLTPTTLSEA VPHTEFIRED NRTRSAQDDI FTQAVNMAGL BACU014182/1-518 VNVFNSGVDV LLTPTTLSEA VPHTEFIRED NRTRSAQNDI FTQAVNMAGL 501 550 ENSP00000358042/1-528 PAVSIPVALS NQGLPIGLQF IGRAFCDQQL LTVAKWFEKQ VQFPVIQLQE ENSBTAP00000023342/1-526 PAVSVPVALS SQGLPIGLQF IGRAFCDQQL LIVAKWFEKQ VQFPVIQLQE ENSTTRP00000008352/1-526 PAVSVPMALS SQGLPIGLQF IGRAFCDQQL LTVAKWFEKQ VQFPVTQLQE bmy_04950T0/1-465 PAVSVPVALS SQGLPIGLQF IGRAFCDQQL LTVAKWFEKR VQFPVIPLQE BACU014182/1-518 PAVSVPMALS SQGLPIGLQF IGRAFCDQQL LTVAKWFEKR VQFPVIQLQE 551 600 ENSP00000358042/1-528 LMDDCSAVLE NEKLASVSLK Q ENSBTAP00000023342/1-526 LMDDCSSVFE NEKLASVSLK - ENSTTRP00000008352/1-526 LMDDCSSVFE NEKLASVSLK - bmy_04950T0/1-465 LMDDCSSIFE NEKLASVSLK - BACU014182/1-518 LMDDCSSIFE NEKLASVSLK -